CASP7 CM_hard Best-GDT_MM scores

last update: 2006-10-24

WARNING: column sorting gets messed up in some browsers (e.g. firefox), especially the negative values in the Z-scores

WARNING: these tables for informational purposes only. do not use them as a means of assessing exact performance in CASP7, as they suffer from all of the problems inherent to automatic evaluation. they are not to be trusted! for other inherently flawed automatic evaluations see Zhang, CAFASP/Fischer (by domains is better), SBC/Wallner&Elofsson, Offman, McGuffin, Soding, and BioInfo/Rychlewski (the "contact" measure offers the most different scoring approach).

if you have any questions or comments, feel free to contact me at DCChivian-at-lbl.gov

get the native PDB codes
get the renumbered native PDB coordinates
get my (rough) definition and classification of the domains

CM_easy   BLAST-level homolog available   First   Score from First model only
CM_hard   PSI-BLAST-level homolog available   Best   Score from Best scoring model (up to 5)
FR_H   Remote homolog detectable with strong confidence (by 3D-Jury)   GDT_MM   GDT using MAMMOTH MaxSub at 1, 2, 3, 4, and 7 Angstroms
FR_A-NF   No homolog detectable with strong confidence (by 3D-Jury)   Z_score   Z-score derived from GDT_MM for that target

CM_easy: [First-GDT_MM] [First-Z_score] [Best-GDT_MM] [Best-Z_score]
CM_hard: [First-GDT_MM] [First-Z_score] [Best-GDT_MM] [Best-Z_score]
FR_H: [First-GDT_MM] [First-Z_score] [Best-GDT_MM] [Best-Z_score]
FR_A-NF: [First-GDT_MM] [First-Z_score] [Best-GDT_MM] [Best-Z_score]
GROUP SUM 289_1 289_2 293 298_1 298_2 311 316_1 322 330_1 330_2 331 338_1 338_2 342 357 360 364 365 367 368 370 373 374 375_1 375_2 384_2 385 SUM GROUP
3D-JIGSAW 1265.82 5.75 42.58 60.00 76.99 59.54 41.60 64.09 50.00 47.08 46.47 54.41 55.04 47.93 14.54 50.00 62.88 22.12 62.24 53.33 41.70 42.30 47.00 58.63 64.16 28.26 67.18 1265.82 3D-JIGSAW
3D-JIGSAW_POPULUS 1182.29 5.84 37.69 53.11 77.63 58.85 38.50 64.08 52.50 32.00 48.78 53.43 54.51 40.71 12.27 41.03 56.86 22.21 39.84 39.49 49.15 42.30 44.62 55.40 63.75 29.27 68.45 1182.29 3D-JIGSAW_POPULUS
3D-JIGSAW_RECOM 1200.50 2.32 48.89 54.32 77.63 55.86 40.50 65.49 49.50 47.08 49.64 54.13 56.46 47.93 12.42 4.66 63.27 19.52 52.80 46.03 53.59 42.30 40.00 58.23 63.33 28.55 66.06 1200.50 3D-JIGSAW_RECOM
3Dpro 1507.97 37.77 9.46 35.56 64.19 78.82 61.61 46.80 63.38 69.50 64.00 48.34 59.44 57.52 51.71 30.60 45.86 71.50 50.10 77.60 51.54 57.65 61.29 66.25 67.26 70.83 58.26 51.13 1507.97 3Dpro
ABIpro 509.12 11.25 11.62 9.96 13.65 10.32 36.09 14.10 17.18 17.00 40.62 11.51 28.53 20.18 13.61 22.42 15.69 13.72 17.88 45.76 28.85 9.54 24.61 21.62 11.37 14.58 9.57 17.89 509.12 ABIpro
BayesHH 1634.07 51.16 44.86 49.16 73.11 75.80 40.23 50.20 67.32 68.63 64.31 65.18 71.19 53.98 52.31 43.79 51.21 71.63 55.86 68.80 52.95 56.47 56.69 68.38 66.45 86.67 59.42 68.31 1634.07 BayesHH
beautshot 1553.20 50.56 12.70 48.09 71.08 63.98 59.31 50.60 64.08 69.75 50.46 61.15 58.88 57.88 50.77 51.97 50.52 69.15 51.44 73.60 51.15 63.14 62.30 68.75 62.18 55.42 52.17 72.11 1553.20 beautshot
beautshotbase 1491.48 48.67 13.24 47.02 47.84 48.82 58.39 44.20 62.96 67.13 44.61 57.41 62.80 54.69 50.65 32.42 50.00 67.06 55.38 67.52 45.13 60.26 64.32 64.50 62.90 92.08 52.03 69.44 1491.48 beautshotbase
Bilab-ENABLE 1571.71 44.38 31.35 45.87 73.11 77.96 57.93 39.70 56.90 67.50 64.31 59.42 60.70 57.88 52.78 44.85 53.97 53.46 51.54 66.56 51.41 63.40 55.40 62.25 67.50 94.58 64.06 52.96 1571.71 Bilab-ENABLE
CaspIta-FOX 1593.29 46.01 37.03 51.29 64.73 76.99 57.01 44.20 65.92 68.62 64.31 55.54 57.48 59.29 48.64 53.18 53.10 69.15 49.14 68.64 47.56 56.47 63.17 63.63 62.82 85.42 50.29 73.66 1593.29 CaspIta-FOX
CIRCLE 1668.53 45.58 40.00 50.76 68.24 80.22 60.46 45.60 66.48 70.25 65.23 58.27 67.27 58.23 51.48 53.48 54.48 69.02 48.65 78.24 52.69 65.75 59.86 73.25 64.12 94.58 54.78 71.55 1668.53 CIRCLE
CPHmodels 559.79 40.00 42.07 20.70 48.59 68.00 48.00 40.70 30.80 20.96 42.56 39.57 37.75 30.24 33.75 16.09 559.79 CPHmodels
Distill 791.66 24.63 14.32 22.76 50.14 46.77 35.86 10.70 53.10 31.25 47.38 6.91 25.17 41.59 11.48 18.48 20.86 42.09 18.08 25.12 18.46 12.29 23.89 57.37 34.76 43.33 27.39 27.46 791.66 Distill
FAMS 1655.82 45.49 38.92 50.67 68.24 80.22 60.46 49.20 67.60 70.00 68.62 60.00 67.55 58.23 51.48 53.48 53.62 69.02 49.14 77.28 52.69 65.75 59.86 66.88 65.08 76.67 53.91 75.78 1655.82 FAMS
FAMSD 1638.22 44.46 44.33 51.20 72.03 78.82 57.93 43.80 66.34 69.75 65.23 60.00 60.98 56.11 51.48 46.82 53.62 69.15 47.60 68.32 56.15 64.31 62.45 63.62 64.11 94.17 53.48 71.97 1638.22 FAMSD
FOLDpro 1541.54 46.27 9.19 35.56 70.27 78.17 61.61 46.80 66.06 69.25 63.08 52.95 62.10 57.52 51.12 30.60 50.17 71.11 48.27 77.76 51.15 54.38 61.29 65.63 66.29 82.08 61.45 51.41 1541.54 FOLDpro
forecast-s 1248.12 36.39 43.82 35.81 73.01 60.92 42.20 59.16 60.62 65.54 53.96 61.96 0.00 4.02 42.42 17.24 66.80 9.81 60.96 51.80 53.60 62.30 58.25 63.39 90.83 2.46 70.85 1248.12 forecast-s
FORTE1 1448.66 40.86 21.08 30.58 58.11 73.87 59.08 43.40 54.37 53.63 44.00 47.05 57.34 55.40 47.69 44.24 52.24 67.45 45.19 62.88 53.20 57.26 59.71 62.37 57.26 82.08 50.29 68.03 1448.66 FORTE1
FORTE2 1461.12 40.86 21.08 34.31 58.11 73.87 58.85 43.40 54.37 53.63 52.92 47.05 57.34 55.40 47.69 44.24 52.24 67.45 45.19 62.88 53.20 57.26 59.71 62.38 57.42 82.08 50.29 67.89 1461.12 FORTE2
FPSOLVER-SERVER 147.78 4.55 0.00 1.96 2.70 11.61 5.52 6.20 3.10 5.12 29.54 5.90 6.99 6.90 2.84 3.94 7.07 3.40 3.85 2.82 3.27 7.48 2.75 2.10 7.08 3.91 7.18 147.78 FPSOLVER-SERVER
Frankenstein 822.88 35.54 5.14 62.37 52.00 48.92 54.13 40.00 14.91 57.65 28.37 63.36 23.97 47.45 63.31 63.50 48.07 15.42 51.88 46.90 822.88 Frankenstein
FUGMOD 1504.72 40.51 38.38 46.49 69.46 77.85 56.78 44.00 61.97 69.25 64.92 48.35 62.52 55.93 49.82 45.61 53.79 61.31 70.56 54.74 54.12 60.43 59.50 59.60 70.83 53.62 74.37 1504.72 FUGMOD
FUGUE 1521.70 38.54 34.59 45.07 67.84 76.45 57.70 40.80 60.70 64.62 63.69 45.47 57.76 55.04 49.82 44.24 52.41 59.35 46.92 67.52 57.95 51.63 61.29 59.37 56.37 80.42 51.88 74.23 1521.70 FUGUE
FUNCTION 1598.99 45.49 38.92 50.67 71.62 77.42 59.77 43.60 66.48 69.25 67.08 48.92 62.38 48.32 51.72 40.30 52.76 67.84 51.06 67.84 54.49 51.24 56.69 73.12 62.74 92.50 55.65 71.13 1598.99 FUNCTION
GeneSilicoMetaServer 1631.66 45.66 36.76 47.29 67.30 78.93 59.08 47.10 64.37 68.50 65.23 53.52 58.32 55.40 52.19 44.85 54.65 68.50 53.85 77.28 52.69 53.99 64.75 66.50 64.60 95.42 60.58 74.37 1631.66 GeneSilicoMetaServer
gtg 626.95 36.22 22.70 30.22 53.24 54.52 58.39 33.40 66.06 64.62 44.92 2.45 60.14 57.35 42.72 626.95 gtg
HHpred1 1583.38 48.24 30.81 50.04 65.40 78.49 59.54 52.20 66.76 62.50 56.31 61.87 67.13 56.64 53.38 45.30 51.55 59.74 52.21 68.80 56.28 52.68 54.68 69.25 63.31 86.67 57.97 55.63 1583.38 HHpred1
HHpred2 1643.58 50.21 32.43 49.07 70.95 83.22 60.92 51.40 65.49 68.88 60.61 65.18 68.25 52.39 53.38 46.06 51.55 68.63 52.79 68.96 53.85 57.38 51.65 69.13 69.60 92.92 63.48 65.21 1643.58 HHpred2
HHpred3 1647.65 48.24 35.68 47.02 70.95 83.22 60.92 51.40 65.49 68.63 64.31 65.18 67.97 57.17 52.66 46.06 51.55 68.63 53.37 68.96 53.85 57.38 50.36 68.25 68.55 93.75 62.90 65.21 1647.65 HHpred3
Huber-Torda-Server 1080.89 10.64 4.05 4.89 12.84 8.17 59.54 16.10 59.44 50.75 53.85 57.99 58.60 48.85 6.98 17.76 61.31 31.15 71.36 45.64 46.28 47.19 59.75 62.01 92.50 45.36 47.89 1080.89 Huber-Torda-Server
karypis.srv 1517.15 31.50 10.27 48.71 47.84 76.99 61.84 46.90 65.35 61.12 63.69 61.87 63.50 58.05 14.56 44.39 53.97 66.67 48.18 77.60 52.95 59.87 59.42 57.00 65.48 93.75 56.38 69.29 1517.15 karypis.srv
karypis.srv.2 1337.07 35.28 17.57 48.27 40.27 75.70 60.69 44.50 65.21 68.00 61.23 64.17 66.85 13.45 6.98 39.40 48.62 68.63 10.38 62.40 55.39 58.56 63.31 57.88 25.48 95.42 16.81 66.62 1337.07 karypis.srv.2
karypis.srv.4 186.14 5.32 3.78 6.49 20.23 4.30 9.02 9.75 21.85 5.47 6.85 8.50 4.24 8.10 6.01 8.56 7.32 11.75 3.71 14.58 5.80 14.51 186.14 karypis.srv.4
keasar-server 1484.74 45.15 47.30 48.36 67.70 77.20 60.23 45.80 62.96 68.13 67.38 57.56 62.93 58.94 49.70 45.91 54.31 64.71 56.83 76.32 55.13 55.29 64.75 62.50 57.68 71.97 1484.74 keasar-server
LOOPP 1547.73 44.81 31.35 50.22 66.89 64.30 59.77 36.80 64.65 59.37 63.08 59.71 61.82 56.64 46.74 50.76 54.83 66.27 47.98 75.20 53.08 48.50 60.29 55.25 63.47 92.92 53.04 60.00 1547.73 LOOPP
Ma-OPUS-server 1585.67 47.38 6.22 47.29 67.84 78.49 58.16 46.00 64.93 66.63 63.69 63.74 63.63 60.71 34.67 51.97 53.45 67.45 48.46 72.48 49.74 55.95 63.31 64.00 69.27 91.67 63.19 65.35 1585.67 Ma-OPUS-server
Ma-OPUS-server2 1235.50 65.07 66.50 63.69 62.59 63.63 54.16 34.67 50.76 54.31 68.89 52.12 73.92 54.36 58.04 63.31 64.37 69.27 88.33 61.31 66.20 1235.50 Ma-OPUS-server2
MetaTasser 1693.52 40.26 31.62 47.82 61.76 58.50 55.17 55.70 67.33 72.88 73.23 65.76 65.87 65.84 52.07 60.76 52.41 71.77 58.08 82.08 63.21 63.79 55.83 73.12 65.89 94.17 61.16 77.47 1693.52 MetaTasser
mGen-3D 1411.65 45.32 26.49 45.51 65.27 56.02 58.85 42.40 61.13 62.50 48.93 56.55 60.70 47.08 49.70 27.57 52.24 61.18 46.15 65.92 42.95 56.47 61.58 53.25 56.61 55.41 38.12 67.75 1411.65 mGen-3D
MIG_FROST 387.58 24.37 24.93 25.32 10.27 10.06 0.00 37.39 15.38 61.60 48.72 7.45 59.14 46.75 16.21 0.00 0.00 387.58 MIG_FROST
nFOLD 1442.71 45.84 35.68 45.24 67.70 65.81 59.54 43.10 63.94 63.25 44.62 55.39 58.74 51.33 5.80 24.24 46.72 66.80 30.10 66.56 51.79 52.81 61.01 63.87 60.81 90.42 51.88 69.72 1442.71 nFOLD
NN_PUT_lab 1333.38 39.91 57.57 64.52 59.77 40.30 64.09 68.50 63.39 60.72 60.84 52.04 0.00 44.24 40.86 66.27 46.63 66.56 46.28 48.50 54.39 51.12 55.40 71.67 48.41 61.41 1333.38 NN_PUT_lab
panther2 705.32 51.76 70.97 41.61 21.70 61.69 53.12 44.00 45.04 0.00 52.21 28.17 0.00 47.76 0.00 0.00 1.92 26.54 55.40 0.00 0.00 80.83 22.61 0.00 705.32 panther2
panther3 95.91 0.00 13.21 0.00 0.00 5.62 0.00 77.08 95.91 panther3
Pcons6 1655.89 48.33 39.46 46.93 65.95 76.88 59.77 48.20 65.50 68.62 63.69 58.99 65.59 61.24 51.01 47.88 53.79 69.15 57.69 80.64 57.82 53.20 66.04 55.87 64.76 95.42 57.68 75.77 1655.89 Pcons6
Phyre-1 1379.03 38.54 17.30 32.71 65.27 75.16 55.17 31.60 63.24 65.25 39.69 58.99 59.30 57.35 42.72 42.58 51.03 67.84 43.08 62.88 48.46 54.38 47.48 69.13 60.00 51.25 55.94 22.68 1379.03 Phyre-1
Phyre-2 1526.90 41.63 33.24 38.40 70.00 56.67 59.54 43.20 64.79 61.25 66.15 61.72 52.59 37.34 50.65 47.27 53.28 67.97 48.56 65.92 54.36 57.91 55.25 63.00 66.69 94.17 59.56 55.78 1526.90 Phyre-2
Pmodeller6 1686.52 46.01 43.79 47.73 66.08 76.02 61.84 49.20 65.50 71.13 71.08 63.31 63.78 66.19 51.12 53.48 53.45 70.59 51.44 81.12 61.80 52.81 57.70 61.25 69.03 95.00 60.87 75.21 1686.52 Pmodeller6
POMYSL 258.87 9.18 10.54 12.44 25.06 0.00 1.75 17.85 5.76 2.24 20.17 10.65 12.58 16.55 7.71 10.09 22.24 23.46 7.32 16.12 10.13 4.78 12.25 258.87 POMYSL
PROTINFO 1542.56 37.94 47.20 66.22 77.20 63.91 45.80 64.65 66.25 63.38 48.20 63.64 60.00 52.78 45.45 52.41 69.94 57.31 80.16 52.31 55.29 63.89 65.62 53.63 58.33 56.81 74.23 1542.56 PROTINFO
PROTINFO-AB 1392.66 12.70 10.27 45.96 66.76 72.04 63.91 43.70 61.13 66.13 61.85 46.33 64.61 59.47 51.83 44.70 52.07 69.28 57.50 79.20 52.05 54.64 66.75 22.42 40.83 51.45 75.07 1392.66 PROTINFO-AB
RAPTOR 1685.07 50.56 55.14 49.25 69.46 73.55 60.69 49.80 63.24 68.75 65.23 61.87 65.45 56.46 52.19 50.91 53.79 68.76 47.21 75.84 57.56 65.75 60.58 69.38 65.16 93.75 63.77 70.99 1685.07 RAPTOR
RAPTOR-ACE 1683.03 51.76 50.54 49.34 67.97 80.00 60.69 48.30 65.07 69.63 63.69 63.45 61.68 60.89 52.19 53.79 54.14 68.50 54.23 78.40 56.92 58.70 55.25 65.75 63.07 93.75 60.15 75.21 1683.03 RAPTOR-ACE
RAPTORESS 1673.28 50.39 51.62 43.73 65.81 73.55 61.84 50.00 61.83 65.63 67.07 59.86 67.27