CASP7 CM_hard First-GDT_MM scores

last update: 2006-10-24

WARNING: column sorting gets messed up in some browsers (e.g. firefox), especially the negative values in the Z-scores

WARNING: these tables for informational purposes only. do not use them as a means of assessing exact performance in CASP7, as they suffer from all of the problems inherent to automatic evaluation. they are not to be trusted! for other inherently flawed automatic evaluations see Zhang, CAFASP/Fischer (by domains is better), SBC/Wallner&Elofsson, Offman, McGuffin, Soding, and BioInfo/Rychlewski (the "contact" measure offers the most different scoring approach).

if you have any questions or comments, feel free to contact me at DCChivian-at-lbl.gov

get the native PDB codes
get the renumbered native PDB coordinates
get my (rough) definition and classification of the domains

CM_easy   BLAST-level homolog available   First   Score from First model only
CM_hard   PSI-BLAST-level homolog available   Best   Score from Best scoring model (up to 5)
FR_H   Remote homolog detectable with strong confidence (by 3D-Jury)   GDT_MM   GDT using MAMMOTH MaxSub at 1, 2, 3, 4, and 7 Angstroms
FR_A-NF   No homolog detectable with strong confidence (by 3D-Jury)   Z_score   Z-score derived from GDT_MM for that target

CM_easy: [First-GDT_MM] [First-Z_score] [Best-GDT_MM] [Best-Z_score]
CM_hard: [First-GDT_MM] [First-Z_score] [Best-GDT_MM] [Best-Z_score]
FR_H: [First-GDT_MM] [First-Z_score] [Best-GDT_MM] [Best-Z_score]
FR_A-NF: [First-GDT_MM] [First-Z_score] [Best-GDT_MM] [Best-Z_score]
GROUP SUM 289_1 289_2 293 298_1 298_2 311 316_1 322 330_1 330_2 331 338_1 338_2 342 357 360 364 365 367 368 370 373 374 375_1 375_2 384_2 385 SUM GROUP
3D-JIGSAW 1116.63 5.75 42.58 51.22 76.34 54.25 28.70 41.97 47.75 33.23 45.76 54.41 53.27 47.93 14.54 11.03 62.88 22.12 62.24 38.85 35.82 42.30 40.37 57.18 60.00 28.26 57.89 1116.63 3D-JIGSAW
3D-JIGSAW_POPULUS 1108.30 5.67 37.42 49.46 77.63 50.58 38.50 64.08 47.75 30.77 48.78 51.75 54.51 31.95 12.27 41.03 56.47 18.85 39.84 22.05 47.45 42.30 43.88 54.11 62.08 28.41 50.70 1108.30 3D-JIGSAW_POPULUS
3D-JIGSAW_RECOM 1107.35 1.72 33.42 53.51 76.24 55.86 40.50 64.79 48.00 47.08 48.20 53.71 54.34 47.93 3.64 3.45 63.27 16.83 18.24 45.77 39.22 42.30 39.38 57.50 60.42 28.11 63.95 1107.35 3D-JIGSAW_RECOM
3Dpro 1448.83 37.00 4.32 35.56 64.19 78.82 61.61 46.80 63.38 69.50 64.00 46.47 54.83 55.22 49.82 30.60 45.86 71.50 48.27 76.64 42.05 57.65 57.70 65.63 59.11 52.92 58.26 51.13 1448.83 3Dpro
ABIpro 383.94 11.25 5.95 8.26 13.65 10.32 20.00 12.20 14.37 11.75 27.38 8.35 19.86 19.47 13.02 11.97 14.83 12.81 15.38 17.60 27.82 6.28 24.61 9.12 6.53 14.58 8.69 17.89 383.94 ABIpro
BayesHH 1634.07 51.16 44.86 49.16 73.11 75.80 40.23 50.20 67.32 68.63 64.31 65.18 71.19 53.98 52.31 43.79 51.21 71.63 55.86 68.80 52.95 56.47 56.69 68.38 66.45 86.67 59.42 68.31 1634.07 BayesHH
beautshot 1553.20 50.56 12.70 48.09 71.08 63.98 59.31 50.60 64.08 69.75 50.46 61.15 58.88 57.88 50.77 51.97 50.52 69.15 51.44 73.60 51.15 63.14 62.30 68.75 62.18 55.42 52.17 72.11 1553.20 beautshot
beautshotbase 1491.48 48.67 13.24 47.02 47.84 48.82 58.39 44.20 62.96 67.13 44.61 57.41 62.80 54.69 50.65 32.42 50.00 67.06 55.38 67.52 45.13 60.26 64.32 64.50 62.90 92.08 52.03 69.44 1491.48 beautshotbase
Bilab-ENABLE 1425.33 44.38 31.35 45.24 66.76 52.58 55.86 11.90 56.90 66.00 43.08 39.71 60.70 50.44 44.38 44.85 53.97 53.46 51.54 63.52 51.41 63.40 47.48 59.75 64.44 93.33 55.94 52.96 1425.33 Bilab-ENABLE
CaspIta-FOX 1286.54 29.35 12.70 40.18 57.97 54.30 57.01 44.20 65.92 54.00 63.69 49.50 57.48 55.22 48.64 7.88 53.10 54.77 46.06 0.00 45.90 56.47 54.53 63.63 62.82 58.75 47.39 45.07 1286.54 CaspIta-FOX
CIRCLE 1581.90 45.58 37.03 48.62 68.24 79.57 56.09 44.70 62.54 70.00 63.38 58.27 67.27 55.22 51.13 53.48 53.62 63.92 48.37 78.24 52.69 58.82 58.71 62.50 64.11 62.92 53.91 62.96 1581.90 CIRCLE
CPHmodels 559.79 40.00 42.07 20.70 48.59 68.00 48.00 40.70 30.80 20.96 42.56 39.57 37.75 30.24 33.75 16.09 559.79 CPHmodels
Distill 716.92 20.34 7.03 22.76 50.14 44.41 35.86 9.40 49.72 29.13 34.46 3.74 25.17 35.22 11.48 18.18 20.17 36.60 16.92 20.64 17.18 12.29 23.89 57.25 34.76 33.75 23.33 23.10 716.92 Distill
FAMS 1553.93 45.32 38.92 50.22 65.54 64.73 52.64 47.30 67.60 68.13 68.62 53.38 67.55 54.34 51.48 43.94 52.07 62.48 49.14 77.28 46.92 52.16 53.96 66.88 65.08 59.59 52.90 75.78 1553.93 FAMS
FAMSD 1564.64 44.46 38.11 51.20 68.92 78.06 52.64 43.50 65.21 69.63 65.23 53.38 57.34 56.11 50.89 46.82 52.93 59.35 47.60 66.72 56.15 64.31 62.45 63.62 63.23 62.92 51.88 71.97 1564.64 FAMSD
FOLDpro 1445.26 46.27 5.41 35.56 70.27 78.17 61.61 28.90 64.65 69.25 63.08 46.47 54.68 57.17 51.12 30.60 50.17 71.11 42.60 76.00 51.15 50.85 58.13 57.75 59.52 53.75 61.45 49.58 1445.26 FOLDpro
forecast-s 1062.03 36.39 43.82 0.00 73.01 60.92 39.80 59.16 55.25 65.54 53.96 61.96 0.00 1.78 42.42 8.27 64.44 2.21 60.96 22.44 53.60 62.30 54.50 55.08 60.42 0.00 23.80 1062.03 forecast-s
FORTE1 1110.12 40.86 21.08 25.07 57.57 73.87 57.70 31.50 9.44 1.00 27.69 5.18 57.34 55.40 47.69 44.24 52.24 8.63 45.19 62.88 53.20 14.38 2.30 62.37 57.26 82.08 50.29 63.66 1110.12 FORTE1
FORTE2 1052.30 40.86 21.08 23.91 57.57 73.87 57.70 31.50 9.44 1.00 27.69 5.18 57.34 55.40 47.69 44.24 52.24 8.63 45.19 62.88 53.20 14.38 2.30 56.50 53.95 34.59 50.29 63.66 1052.30 FORTE2
FPSOLVER-SERVER 123.71 4.55 0.00 1.96 2.43 9.36 3.68 5.60 2.68 2.87 28.61 5.90 6.99 6.90 2.60 2.88 6.03 3.40 1.92 2.82 3.27 3.31 2.75 2.10 0.00 3.91 7.18 123.71 FPSOLVER-SERVER
Frankenstein 774.58 35.54 5.14 62.37 52.00 48.92 54.13 40.00 14.91 55.69 28.37 54.88 3.59 47.45 53.81 56.25 48.07 15.42 51.16 46.90 774.58 Frankenstein
FUGMOD 1442.64 36.39 38.38 43.02 67.03 77.85 54.02 44.00 61.97 69.25 64.92 48.35 62.52 55.93 49.82 45.61 53.79 61.31 70.56 54.74 51.90 51.22 57.12 59.60 70.83 53.62 38.87 1442.64 FUGMOD
FUGUE 1382.89 34.51 34.59 42.49 66.62 76.45 55.86 40.80 60.70 64.62 63.69 45.32 57.76 55.04 49.82 44.24 52.41 59.35 14.61 67.52 57.95 49.67 2.30 58.00 56.37 80.42 51.88 39.86 1382.89 FUGUE
FUNCTION 1474.66 45.32 38.92 50.22 60.54 76.02 59.77 43.60 66.06 69.25 67.08 48.92 54.41 48.32 51.72 27.88 52.76 58.69 41.83 67.84 37.82 50.59 56.69 63.63 59.19 50.83 55.65 71.13 1474.66 FUNCTION
GeneSilicoMetaServer 1560.36 45.66 20.00 43.65 67.30 76.56 57.24 47.10 63.80 68.50 65.23 47.77 58.32 52.04 52.19 44.54 52.41 68.50 47.50 71.36 51.28 50.98 64.75 60.75 63.06 93.75 51.74 74.37 1560.36 GeneSilicoMetaServer
gtg 547.10 36.22 5.14 30.22 44.59 54.52 57.47 31.40 66.06 58.62 5.85 2.45 58.04 53.80 42.72 547.10 gtg
HHpred1 1583.38 48.24 30.81 50.04 65.40 78.49 59.54 52.20 66.76 62.50 56.31 61.87 67.13 56.64 53.38 45.30 51.55 59.74 52.21 68.80 56.28 52.68 54.68 69.25 63.31 86.67 57.97 55.63 1583.38 HHpred1
HHpred2 1643.58 50.21 32.43 49.07 70.95 83.22 60.92 51.40 65.49 68.88 60.61 65.18 68.25 52.39 53.38 46.06 51.55 68.63 52.79 68.96 53.85 57.38 51.65 69.13 69.60 92.92 63.48 65.21 1643.58 HHpred2
HHpred3 1647.65 48.24 35.68 47.02 70.95 83.22 60.92 51.40 65.49 68.63 64.31 65.18 67.97 57.17 52.66 46.06 51.55 68.63 53.37 68.96 53.85 57.38 50.36 68.25 68.55 93.75 62.90 65.21 1647.65 HHpred3
Huber-Torda-Server 824.93 7.56 4.05 4.62 10.14 1.51 59.54 6.30 56.76 50.75 34.46 51.94 4.89 16.10 3.20 2.76 55.82 31.15 71.36 35.90 46.28 41.58 58.25 62.01 52.92 45.36 9.72 824.93 Huber-Torda-Server
karypis.srv 1478.53 30.47 10.27 48.71 45.95 76.24 59.54 46.90 65.35 57.25 63.69 54.53 63.50 54.87 12.54 44.39 53.97 66.67 48.18 77.60 52.95 59.87 46.47 57.00 62.34 93.75 56.38 69.15 1478.53 karypis.srv
karypis.srv.2 1238.62 34.25 17.57 48.27 30.14 75.70 52.41 44.30 64.08 68.00 47.39 64.17 61.96 4.07 6.39 39.40 48.62 59.61 7.21 62.08 53.72 54.77 50.36 52.12 25.48 86.67 15.94 63.94 1238.62 karypis.srv.2
karypis.srv.4 131.39 5.32 3.78 6.49 20.23 4.20 8.45 5.75 21.85 3.31 2.52 8.50 3.33 6.72 6.01 2.21 2.75 5.25 2.26 0.00 2.46 10.00 131.39 karypis.srv.4
keasar-server 1414.00 45.15 47.30 47.38 63.79 72.69 58.16 42.00 62.96 68.13 64.62 57.41 62.93 56.46 49.00 42.27 52.93 63.66 48.17 76.00 46.15 54.77 59.42 62.13 38.55 71.97 1414.00 keasar-server
LOOPP 1373.83 44.64 4.05 48.09 58.38 62.69 59.77 23.80 62.54 55.75 54.77 58.70 60.84 52.04 46.74 9.85 54.83 66.27 29.14 63.84 50.64 48.50 54.39 51.12 62.82 82.50 48.41 58.73 1373.83 LOOPP
Ma-OPUS-server 1421.60 45.32 5.68 47.29 67.03 78.49 8.97 46.00 62.25 66.63 46.46 63.74 60.56 53.10 9.35 51.97 51.38 54.77 38.08 67.84 45.51 51.63 57.27 63.63 64.68 91.67 56.96 65.35 1421.60 Ma-OPUS-server
Ma-OPUS-server2 1136.06 53.80 65.38 47.69 62.59 61.12 54.16 11.83 50.76 54.31 60.00 45.29 67.84 46.15 58.04 57.27 62.63 65.72 88.33 56.96 66.20 1136.06 Ma-OPUS-server2
MetaTasser 1645.34 35.45 28.92 45.16 57.97 58.50 51.03 54.90 65.49 72.88 72.92 65.76 60.28 60.71 51.60 56.67 52.41 71.24 57.69 81.60 57.18 62.22 55.83 73.12 65.89 94.17 59.13 76.62 1645.34 MetaTasser
mGen-3D 1411.65 45.32 26.49 45.51 65.27 56.02 58.85 42.40 61.13 62.50 48.93 56.55 60.70 47.08 49.70 27.57 52.24 61.18 46.15 65.92 42.95 56.47 61.58 53.25 56.61 55.41 38.12 67.75 1411.65 mGen-3D
MIG_FROST 387.58 24.37 24.93 25.32 10.27 10.06 0.00 37.39 15.38 61.60 48.72 7.45 59.14 46.75 16.21 0.00 0.00 387.58 MIG_FROST
nFOLD 1331.62 45.84 35.68 43.65 52.57 65.81 53.10 40.30 59.44 57.25 32.62 53.81 58.74 47.08 0.00 6.51 46.72 66.80 30.10 66.56 51.79 50.98 46.62 55.88 60.08 90.42 51.88 61.41 1331.62 nFOLD
NN_PUT_lab 1333.38 39.91 57.57 64.52 59.77 40.30 64.09 68.50 63.39 60.72 60.84 52.04 0.00 44.24 40.86 66.27 46.63 66.56 46.28 48.50 54.39 51.12 55.40 71.67 48.41 61.41 1333.38 NN_PUT_lab
panther2 705.32 51.76 70.97 41.61 21.70 61.69 53.12 44.00 45.04 0.00 52.21 28.17 0.00 47.76 0.00 0.00 1.92 26.54 55.40 0.00 0.00 80.83 22.61 0.00 705.32 panther2
panther3 95.91 0.00 13.21 0.00 0.00 5.62 0.00 77.08 95.91 panther3
Pcons6 1592.14 48.33 26.76 46.84 63.11 73.76 58.39 41.00 65.50 68.00 63.69 57.56 64.62 61.24 50.06 45.60 53.79 67.06 51.54 80.64 57.82 50.72 66.04 54.25 60.08 92.92 50.14 72.68 1592.14 Pcons6
Phyre-1 1379.03 38.54 17.30 32.71 65.27 75.16 55.17 31.60 63.24 65.25 39.69 58.99 59.30 57.35 42.72 42.58 51.03 67.84 43.08 62.88 48.46 54.38 47.48 69.13 60.00 51.25 55.94 22.68 1379.03 Phyre-1
Phyre-2 1501.81 41.63 33.24 35.20 70.00 55.48 59.54 41.40 63.66 61.25 66.15 61.01 51.75 37.34 50.65 47.27 53.28 66.40 44.52 65.76 51.92 54.38 55.25 63.00 66.69 94.17 55.08 55.78 1501.81 Phyre-2
Pmodeller6 1574.79 45.75 5.95 46.31 63.51 73.44 61.84 42.40 64.08 69.25 71.08 60.00 60.42 61.06 47.34 53.18 52.76 65.10 46.63 71.04 61.80 50.85 50.22 61.00 67.50 88.75 60.29 73.24 1574.79 Pmodeller6
POMYSL 218.18 9.18 4.32 12.44 21.15 0.00 1.75 16.31 3.31 1.96 16.99 6.98 11.21 16.55 7.32 9.90 16.16 20.00 5.62 13.09 10.13 4.78 9.01 218.18 POMYSL
PROTINFO 1476.28 11.50 45.78 66.22 77.20 63.91 45.80 61.41 61.63 63.38 46.91 60.42 57.35 52.78 45.45 51.90 68.76 53.46 80.16 50.38 53.60 53.96 65.62 53.63 58.33 54.64 72.11 1476.28 PROTINFO
PROTINFO-AB 1338.65 12.36 3.78 45.96 66.08 71.72 43.45 41.00 60.71 66.00 60.92 46.04 61.82 56.46 51.71 44.70 51.90 68.23 57.21 77.44 46.28 53.60 64.25 22.25 40.83 49.85 74.09 1338.65 PROTINFO-AB
RAPTOR 1558.44 48.33 49.19 49.25 68.78 69.25 60.69 43.80 62.96 61.00 45.23 60.14 65.45 56.11 49.11 50.91 53.45 65.36 47.21 75.36 49.49 57.91 51.08 63.75 61.13 62.50 61.02 70.00 1558.44 RAPTOR
RAPTOR-ACE 1614.97 45.24 37.84 46.22 67.97 80.00 60.69 48.30 65.07 67.88 63.69 60.72 61.68 60.89 52.19 50.76 53.28 68.50 48.65 64.80 56.92 58.70 50.79 62.75 61.05 93.75 51.59 75.07 1614.97 RAPTOR-ACE
RAPTORESS 1550.07 50.39 51.62 43.73 65.81 73.55 61.84 43.10 61.13 58.63 49.23 58.42 67.27