CASP7 FR_A-NF First-GDT_MM scores

last update: 2006-10-24

WARNING: column sorting gets messed up in some browsers (e.g. firefox), especially the negative values in the Z-scores

WARNING: these tables for informational purposes only. do not use them as a means of assessing exact performance in CASP7, as they suffer from all of the problems inherent to automatic evaluation. they are not to be trusted! for other inherently flawed automatic evaluations see Zhang, CAFASP/Fischer (by domains is better), SBC/Wallner&Elofsson, Offman, McGuffin, Soding, and BioInfo/Rychlewski (the "contact" measure offers the most different scoring approach).

if you have any questions or comments, feel free to contact me at DCChivian-at-lbl.gov

get the native PDB codes
get the renumbered native PDB coordinates
get my (rough) definition and classification of the domains

CM_easy   BLAST-level homolog available   First   Score from First model only
CM_hard   PSI-BLAST-level homolog available   Best   Score from Best scoring model (up to 5)
FR_H   Remote homolog detectable with strong confidence (by 3D-Jury)   GDT_MM   GDT using MAMMOTH MaxSub at 1, 2, 3, 4, and 7 Angstroms
FR_A-NF   No homolog detectable with strong confidence (by 3D-Jury)   Z_score   Z-score derived from GDT_MM for that target

CM_easy: [First-GDT_MM] [First-Z_score] [Best-GDT_MM] [Best-Z_score]
CM_hard: [First-GDT_MM] [First-Z_score] [Best-GDT_MM] [Best-Z_score]
FR_H: [First-GDT_MM] [First-Z_score] [Best-GDT_MM] [Best-Z_score]
FR_A-NF: [First-GDT_MM] [First-Z_score] [Best-GDT_MM] [Best-Z_score]
GROUP SUM 283 296 299_1 299_2 300 304 306 307 309 314_1 314_2 316_2 316_3 318_1 319 321_1 335 347_1 347_2 348 350 351 353 354 356_1 356_2 356_3 358 361 372_1 372_2 382 383 SUM GROUP
3D-JIGSAW 397.86 14.82 4.16 20.45 8.45 21.80 10.65 9.68 14.39 11.29 4.86 0.00 8.43 11.85 6.47 43.33 11.43 20.29 11.80 21.20 13.00 9.88 15.50 5.89 2.06 4.64 16.67 10.49 9.20 25.23 15.04 14.88 397.86 3D-JIGSAW
3D-JIGSAW_POPULUS 520.83 16.61 5.62 20.00 14.89 21.80 13.08 8.00 14.39 7.74 19.46 20.62 8.20 11.26 4.71 47.14 14.12 15.43 6.89 21.37 23.33 18.59 24.17 19.11 4.43 4.40 17.27 13.17 28.89 43.84 14.22 18.08 520.83 3D-JIGSAW_POPULUS
3D-JIGSAW_RECOM 435.66 15.00 2.32 19.10 12.22 21.80 12.90 4.42 14.39 19.03 15.13 0.00 8.43 12.44 14.51 45.71 5.87 20.00 6.23 17.26 14.00 17.41 21.00 5.89 2.06 4.64 13.03 12.32 14.13 30.82 14.22 19.36 435.66 3D-JIGSAW_RECOM
3Dpro 561.53 15.72 4.84 20.90 3.56 25.39 19.25 24.21 16.52 17.10 15.41 10.00 4.59 3.78 20.67 13.63 4.31 57.62 9.21 29.43 41.64 19.49 34.67 13.65 22.00 10.89 2.16 2.62 16.97 11.58 14.13 6.51 19.17 29.92 561.53 3Dpro
ABIpro 589.46 19.46 7.46 25.17 18.89 20.68 19.25 10.95 16.67 17.10 13.78 20.00 12.43 4.89 7.98 13.63 15.10 57.62 9.21 29.43 26.56 19.49 34.67 30.12 22.00 15.18 4.43 5.36 17.88 11.58 15.40 11.63 19.17 16.32 589.46 ABIpro
BayesHH 630.58 26.25 3.24 22.70 17.11 22.47 13.46 4.00 17.12 10.00 10.54 12.50 0.00 4.00 19.66 2.81 2.75 66.67 50.16 20.29 38.03 12.14 13.33 19.77 28.67 0.00 39.59 2.74 16.06 21.22 34.44 46.63 22.31 9.92 630.58 BayesHH
beautshot 558.57 15.36 5.47 14.16 11.11 29.44 18.32 12.84 14.09 20.00 10.27 10.00 0.00 7.78 21.91 11.55 3.92 41.43 2.86 12.86 42.30 18.80 20.67 18.12 29.50 13.04 2.27 7.02 26.36 13.66 25.87 49.77 20.00 7.84 558.57 beautshot
beautshotbase 544.37 18.39 5.91 8.31 14.67 29.89 13.46 12.42 14.54 20.00 10.27 10.00 0.00 7.87 5.04 10.00 46.19 6.19 25.14 40.66 13.84 26.00 16.94 28.33 12.32 5.46 8.45 21.82 13.05 24.45 44.54 19.34 10.88 544.37 beautshotbase
Bilab-ENABLE 418.13 36.07 7.84 8.76 14.67 16.63 14.77 18.32 20.00 4.84 5.95 0.00 4.32 5.11 23.26 12.89 14.32 0.00 19.84 0.00 0.00 21.03 5.67 13.41 10.00 13.93 5.67 0.00 4.55 15.73 19.05 49.19 15.70 16.64 418.13 Bilab-ENABLE
CaspIta-FOX 423.32 19.64 2.57 24.27 3.56 29.44 3.18 4.63 16.06 0.00 14.05 3.12 0.00 1.56 16.85 2.67 3.33 39.05 3.02 25.43 0.00 6.67 25.67 21.41 17.33 8.93 1.86 8.69 20.00 7.93 15.87 41.39 18.35 16.80 423.32 CaspIta-FOX
CIRCLE 673.82 22.14 6.59 17.98 8.44 30.56 11.96 7.79 15.30 5.81 11.35 0.00 17.84 19.78 20.56 15.70 10.79 73.33 46.67 21.14 25.25 13.68 18.67 35.30 15.34 3.04 4.95 9.64 17.58 15.36 24.13 50.93 32.89 43.36 673.82 CIRCLE
CPHmodels 3.78 3.78 0.00 3.78 CPHmodels
Distill 551.75 25.18 7.70 23.15 8.89 31.91 16.08 11.58 13.64 8.71 6.49 30.63 17.03 4.44 14.38 11.70 14.90 71.43 14.92 20.86 4.92 18.46 20.33 24.94 21.33 11.07 2.68 8.09 8.79 15.85 13.49 10.00 18.18 20.00 551.75 Distill
FAMS 599.04 22.50 6.73 17.53 14.44 26.07 14.21 4.21 15.00 9.36 9.46 7.50 12.70 8.45 20.56 13.78 12.75 42.86 46.67 21.14 16.39 17.78 25.66 10.12 34.33 11.97 6.29 15.24 16.67 14.15 0.00 37.44 21.98 45.12 599.04 FAMS
FAMSD 601.75 20.00 6.83 21.35 10.22 31.01 17.94 11.58 15.30 5.81 4.86 24.38 12.70 8.45 23.60 12.30 11.18 23.33 26.82 17.43 24.92 14.53 20.67 21.65 27.83 10.89 2.27 7.02 18.18 15.12 18.10 51.63 20.50 43.36 601.75 FAMSD
FOLDpro 456.08 15.72 3.63 17.98 12.45 20.45 8.60 7.58 13.49 19.03 15.41 7.50 4.59 5.33 14.49 5.04 7.84 43.81 24.44 0.00 46.56 15.73 19.00 16.94 17.67 10.89 2.47 2.50 16.67 14.63 6.03 2.09 7.60 29.92 456.08 FOLDpro
forecast-s 199.61 2.08 12.14 7.78 13.71 3.36 13.26 0.00 4.52 3.51 0.00 0.00 0.00 7.87 2.22 7.65 0.00 0.00 9.43 4.26 12.65 20.33 20.23 30.50 2.32 0.00 0.00 0.00 3.90 11.59 0.58 3.31 2.40 199.61 forecast-s
FORTE1 362.23 14.47 0.00 5.17 4.22 22.92 6.35 3.16 9.39 0.00 4.05 0.00 1.35 0.00 19.21 6.96 5.69 55.71 22.70 10.86 3.93 10.77 6.00 13.18 12.67 2.68 1.65 2.38 16.97 0.00 14.44 43.95 28.59 12.80 362.23 FORTE1
FORTE2 409.87 18.57 0.00 15.05 7.56 22.92 6.35 20.42 9.39 0.00 4.05 0.00 1.35 0.00 19.21 6.96 5.69 55.71 22.70 10.86 3.93 12.31 6.00 13.18 12.67 2.86 2.06 1.79 28.49 0.00 14.44 43.95 28.59 12.80 409.87 FORTE2
FPSOLVER-SERVER 170.28 18.57 4.02 20.67 7.56 24.72 3.55 3.03 4.19 6.22 0.00 0.00 3.56 4.61 9.33 8.82 9.05 2.54 4.00 5.90 2.91 0.00 5.18 3.33 0.00 5.12 3.64 9.76 170.28 FPSOLVER-SERVER
Frankenstein 111.20 10.48 10.82 13.85 20.67 25.41 4.67 3.17 2.67 3.31 16.16 111.20 Frankenstein
FUGMOD 356.99 23.21 5.23 9.44 4.00 16.18 4.11 12.42 13.64 14.84 4.59 0.00 7.87 5.33 10.98 0.00 0.00 24.86 10.49 14.70 5.00 16.71 11.50 27.58 14.27 20.79 48.26 13.55 17.44 356.99 FUGMOD
FUGUE 318.74 24.11 5.96 9.66 4.67 17.53 3.93 8.84 13.18 1.94 5.68 0.00 0.00 0.00 7.87 8.59 10.98 0.00 0.00 0.86 5.25 14.19 19.00 0.00 11.50 5.95 29.09 14.02 17.94 46.28 17.03 14.72 318.74 FUGUE
FUNCTION 570.34 21.07 5.57 3.82 8.45 31.91 12.34 14.32 13.18 11.94 5.14 0.00 20.67 10.81 10.59 43.81 24.29 22.00 42.62 15.04 22.67 26.35 29.33 10.72 4.64 5.71 11.82 13.29 20.16 42.21 18.68 47.20 570.34 FUNCTION
GeneSilicoMetaServer 532.92 5.38 20.45 17.56 25.85 21.31 3.58 12.88 18.39 4.05 0.00 4.32 0.00 19.89 11.55 35.24 5.71 20.57 37.38 14.36 24.33 16.71 27.33 9.11 2.78 7.26 35.15 8.29 20.32 47.91 41.82 13.44 532.92 GeneSilicoMetaServer
gtg 22.40 0.00 0.00 4.24 0.00 0.00 17.42 0.74 22.40 gtg
HHpred1 665.27 20.18 4.31 19.10 0.00 24.27 9.91 22.74 11.21 5.16 10.81 0.00 4.59 51.11 20.90 10.67 2.75 66.67 37.14 24.00 44.59 6.84 0.00 19.53 28.17 0.00 41.86 8.21 16.67 11.95 27.94 47.09 20.99 45.92 665.27 HHpred1
HHpred2 651.30 20.18 4.31 21.57 0.00 17.98 18.51 22.74 11.21 5.16 5.14 8.12 4.32 51.11 20.67 2.52 2.75 66.67 45.08 25.14 44.59 6.84 23.00 17.65 28.17 0.00 0.00 6.79 16.67 13.42 31.43 42.67 20.99 45.92 651.30 HHpred2
HHpred3 655.40 21.61 0.00 24.94 18.22 24.27 17.01 20.63 15.61 5.16 5.14 8.12 4.32 51.11 21.68 10.52 2.75 66.67 45.71 20.00 42.62 12.14 22.66 17.65 29.50 0.00 0.00 10.71 15.15 20.73 31.91 38.84 22.65 7.36 655.40 HHpred3
Huber-Torda-Server 253.52 20.54 3.78 18.20 9.11 15.05 10.09 13.69 7.27 4.52 3.51 5.00 0.00 0.00 8.54 12.29 2.55 8.09 9.71 0.00 16.00 8.93 3.71 3.93 8.78 17.78 7.09 24.30 11.04 253.52 Huber-Torda-Server
karypis.srv 491.46 21.43 4.99 15.73 15.89 4.42 9.85 4.84 5.68 0.00 6.22 14.89 20.00 8.59 8.24 32.38 12.86 24.86 8.85 20.00 10.33 25.65 25.33 15.36 4.95 6.91 18.48 22.32 38.57 48.49 20.33 15.04 491.46 karypis.srv
karypis.srv.2 439.11 14.29 3.97 28.76 13.34 18.65 3.74 8.21 13.48 13.23 10.00 25.62 0.00 4.67 2.47 6.07 8.04 31.43 4.92 5.14 6.56 24.11 16.00 29.88 27.00 3.93 4.43 8.69 22.42 10.36 23.97 26.51 15.37 3.84 439.11 karypis.srv.2
karypis.srv.4 190.18 13.75 0.87 9.21 7.56 20.22 2.80 4.84 16.21 5.16 5.41 0.00 9.19 7.56 1.80 5.93 8.04 3.97 5.71 6.23 7.69 8.67 4.47 4.83 3.93 2.37 3.21 6.06 8.29 3.31 2.88 190.18 karypis.srv.4
keasar-server 466.09 19.47 5.04 15.73 4.89 20.45 3.93 0.00 16.06 4.84 10.54 9.38 5.41 0.00 18.54 12.15 49.05 14.92 14.29 36.39 18.12 27.67 14.35 13.50 14.64 2.47 16.90 5.45 12.32 25.87 12.79 14.55 26.40 466.09 keasar-server
LOOPP 560.05 22.68 5.47 18.43 13.78 23.82 6.54 4.00 11.51 11.29 16.22 9.38 5.14 8.89 21.12 3.85 14.51 36.19 12.22 15.43 20.33 18.97 25.33 28.94 19.33 14.64 5.88 7.97 29.39 13.78 26.19 36.98 24.96 26.88 560.05 LOOPP
Ma-OPUS-server 533.24 19.11 4.12 20.22 8.45 18.43 16.08 8.00 9.54 17.10 10.27 0.00 6.22 3.78 17.53 13.33 6.86 39.52 13.65 23.72 6.56 17.26 20.00 24.00 8.33 19.64 32.16 3.81 20.60 13.42 23.81 50.70 22.31 14.72 533.24 Ma-OPUS-server
Ma-OPUS-server2 333.38 13.33 33.81 6.19 18.00 6.56 14.87 27.67 21.41 20.33 19.64 8.14 3.81 20.60 15.49 24.92 44.53 19.50 14.56 333.38 Ma-OPUS-server2
MetaTasser 685.38 22.14 5.04 27.42 11.11 27.19 6.54 17.90 17.58 13.23 11.89 20.62 8.65 5.56 31.01 13.19 7.84 48.10 39.21 20.29 49.84 13.85 27.33 33.65 26.17 7.32 2.06 2.74 11.82 14.63 40.79 53.02 24.79 22.88 685.38 MetaTasser
mGen-3D 488.97 19.11 5.42 18.88 19.11 31.91 20.00 3.37 12.88 4.84 15.13 0.00 2.16 3.11 15.39 0.00 3.53 54.76 10.64 20.00 32.13 11.97 19.67 23.53 22.67 15.89 2.02 33.94 17.81 0.79 0.00 19.67 28.64 488.97 mGen-3D
MIG_FROST 49.29 0.00 2.44 11.69 0.00 12.21 0.00 1.46 21.49 49.29 MIG_FROST
MIG_FROST_FLEX 4.42 4.42 0.00 4.42 MIG_FROST_FLEX
nFOLD 329.60 15.89 0.00 18.20 10.67 20.68 15.33 4.21 14.24 6.45 9.46 7.50 3.78 4.00 19.66 5.78 3.14 28.09 10.00 8.00 4.59 3.93 6.00 16.47 11.83 11.61 2.47 2.14 23.64 10.00 4.60 7.56 19.67 0.00 329.60 nFOLD
NN_PUT_lab 474.95 5.76 18.43 13.78 23.82 15.33 4.21 11.51 11.29 16.22 9.38 3.78 4.00 19.66 5.78 14.51 28.09 16.35 5.14 5.25 14.19 19.00 16.47 21.33 10.72 2.99 8.81 29.09 14.02 21.27 50.23 19.67 14.88 474.95 NN_PUT_lab
panther2 104.09 2.70 16.85 2.80 4.00 11.06 9.36 0.00 0.00 14.27 0.00 2.35 30.47 0.00 0.00 0.00 5.83 0.00 0.00 0.00 2.15 2.24 104.09 panther2
panther3 13.51 0.00 11.77