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Job 52075 [4rt5_2014-11-28_00000024_1_11] [2014-11-28] [131.152.x.x] [Structure] [Complete]

Full Structure Predictions  
Model 1

 chemical/x-pdb  MIME type  PDB file
Model 2

 chemical/x-pdb  MIME type  PDB file
Model 3

 chemical/x-pdb  MIME type  PDB file
Model 4

 chemical/x-pdb  MIME type  PDB file
Model 5

 chemical/x-pdb  MIME type  PDB file

Click the icons below each image to download the prediction in PDB format ( PDB file )

Images were produced using MolScript and Raster3D!



Features and Secondary Structure  
 
1   .   10    .   20    .   30    .   40    .   50    .   60    .   70    .   80    .   90    .  100    .  110 
 
SNAMETSVIEASSLKLDDLHHIAISVTDVAQSVEWYTSHFQCRIAYQDSTWALLKFGNLSLALVIPEQHPPHIAFTSDRAGEYGSLKTHRDGTRSCYIQDPSGNSVELMDPTSL
tmhmm (0)
------------------------------------------------------------------------------------------------------------------
low complexity (0%)
------------------------------------------------------------------------------------------------------------------
coiled-coils (0%)
------------------------------------------------------------------------------------------------------------------
disordered (16%)
XXXXXXXXXXXXXXXX------------------------------------------------------------------------------------------------XX
psipred
--------------------EEEEEE--HHHHHHHHHH----EEEEE---EEEEE---EEEEEE-------EEEEE---HHHHHHHHH-----EEEEEE-----EEEEEE----

# SignalP-4.0 gram- predictions
# Measure  Position  Value  Cutoff  signal peptide?
  max. C    31	    0.125
  max. Y    53	    0.138
  max. S    47	    0.281
  mean S     1-52   0.103
       D     1-52   0.122    0.570  NO
Name=tmp_signalp_seq	SP='NO' D=0.122 D-cutoff=0.570 Networks=SignalP-noTM


Domain Repeats Prediction     Top
  Boundary     STD (+/-)     Consensus  
------


Ginzu Domain Prediction 1       Top
Domain Span Source Reference Parent   Parent Span     Confidence     Annotations  
  1-114     alignment     4mymA_201     1-151   0.3443   --


PSI-BLAST Sequence Hits (Top 20 by Identity)   ALL DATA       Top
TaxID Species Alignments PSI-Blast Data (alignment with lowest E value)
E value Query Span Sbjct Span Bit Score Identity HSP Length Accession Description
521674Planctomyces limnophilus DSM 37763 (0.08%)2E-334-1141-111147100111ref|YP_003629461.1|glyoxalase/bleomycin resistance protein/dioxygenase [Plancto...
756272Planctomyces brasiliensis DSM 53052 (0.05%)2E-2816-1146-1041306299ref|YP_004270542.1|glyoxalase/bleomycin resistance protein/dioxygenase [Plancto...
455065uncultured planctomycete 13FN1 (0.03%)4E-204-11311-12110357111gb|ABX10720.1|hypothetical protein 13FN_9 [uncultured planctomycete 13FN]
748653Thioalkalivibrio sp. ALJ172 (0.05%)6E-274-1131-10712555110ref|WP_018954596.1|glyoxalase [Thioalkalivibrio sp. ALJ17]
396588Thioalkalivibrio sulfidophilus HL-EbGr74 (0.1%)8E-274-1131-10712555110ref|YP_002513457.1|glyoxalase/bleomycin resistance protein/dioxygenase [Thioalk...
95641Methylomicrobium buryatense1 (0.03%)1E-2416-1101-951185295ref|WP_017839980.1|hypothetical protein [Methylomicrobium buryatense]
270495Fangia hongkongensis1 (0.03%)4E-2616-1131-981234898ref|WP_018299066.1|hypothetical protein [Fangia hongkongensis]
203124Trichodesmium erythraeum IMS1013 (0.08%)2E-3114-1111-11414040115ref|YP_722882.1|glyoxalase/bleomycin resistance protein/dioxygenase [Trichod...
1303518Chthonomonas calidirosea T491 (0.03%)2E-1814-1101-1059837105ref|YP_008089328.1|hypothetical protein CCALI_01393 [Chthonomonas calidirosea T...
91464Synechococcus sp. PCC 73354 (0.1%)2E-3214-1141-11714336118ref|WP_006456995.1|glyoxalase [Synechococcus sp. PCC 7335] gb|EDX87210.1| glyox...
195252Synechococcus sp. PCC 75021 (0.03%)2E-3114-1121-11514036116ref|YP_007104620.1|putative ring-cleavage extradiol dioxygenase [Synechococcus ...
316274Herpetosiphon aurantiacus DSM 7853 (0.08%)2E-2218-1112-10211136101ref|YP_001543411.1|glyoxalase/bleomycin resistance protein/dioxygenase [Herpeto...
179408Oscillatoria nigro-viridis PCC 71121 (0.03%)6E-3314-1111-11414535115ref|YP_007114861.1|Glyoxalase/bleomycin resistance protein/dioxygenase [Oscilla...
756067Microcoleus vaginatus FGP-22 (0.05%)3E-3214-1111-11414335115ref|WP_006631220.1|glyoxalase [Microcoleus vaginatus] gb|EGK90244.1| Glyoxalase...
272129Oscillatoria sp. PCC 65063 (0.08%)5E-3214-1111-11414235115ref|WP_007354995.1|glyoxalase [Oscillatoria] emb|CBN55780.1| glyoxalase/bleomyc...
1173028Oscillatoria sp. PCC 108021 (0.03%)3E-3414-1111-11415034115ref|WP_017718547.1|glyoxalase [Oscillatoria sp. PCC 10802]
56110Oscillatoria acuminata PCC 63041 (0.03%)3E-3414-1141-11715034118ref|YP_007084365.1|lactoylglutathione lyase-like lyase [Oscillatoria acuminata ...
82654Pseudanabaena sp. PCC 73671 (0.03%)4E-3014-1131-11613634117ref|YP_007103829.1|Glyoxalase/bleomycin resistance protein/dioxygenase [Pseudan...
321332Synechococcus sp. JA-2-3B'a(2-13)1 (0.03%)8E-3114-1111-11313833114ref|YP_476540.1|glyoxalase family protein [Synechococcus sp. JA-2-3B'a(2-13)...
634502Arthrospira platensis str. Paraca2 (0.05%)9E-3114-1111-11413833115ref|YP_005067538.1|hypothetical protein [Arthrospira platensis NIES-39] ref|WP_...






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