SSGCID - LpboA.00107.a Membrane efflux protein Domain 2 Parse 1 Confidence: 0.85

Job ID	Status	Method	Username	Target	Length	Date (PST)	Expiration Date (PST)
2694	Domain complete	Structure prediction	ssgcid	SSGCID - LpboA.00107.a Me...	476	9 Apr 2019	-

Domain ID	Domain	Parse	Confidence	Modeling Method	Model Span	Length	Date (PST)
2894	2	1	0.85	comparative modeling	178-476	299	12 Apr 2019

Cluster 2 Templates

GREMLIN (Neff(80%)/√Len: 131.1)

Alignment

>2894
AGAVSETELKSVETSLNSAEISLFKAEKNLASLKMGYRPEDLNKANIQIPKNKSELKEAYIKLNTMIENAELDMAEANFKSTLKNMESTQLLLKESNIKSPLSGTVASRIKEQGEAVKGGEALYIVVDTSKVILKFNIGESELWKLKKDQKVNFIVDAYPGQNFEGKVYIISPIVDPQSRTVEVKVIAQNEKKLLKPGMFTRGYILLEEARKKTFLIPLKALIKNKEGKSGTVFVANEENRLFSVEVEIIKEESGFVEVLGNLELGRYIAISDLNELKEGQKVKIPKEQTPSLIEEKSY
>3lnnA_201 weight: 0.3808 score: 332.88 eval: 2.9e-43 prob: 100 identity: 0.1773 startpos: 79
---IDSADLAQANSDAAKARAAMTMARRNLD------RQRELDKSEIAAKRDFEQAQS------------DYDQAASESQRADARLAQLGagGHILAVRSPINGRVVDLNAATGAYWNDtaSLMTVADLSHVFVTANAQEKDLGHVYVGQSATVKFDAYDD-PQPGKVRYVGQILDADTRTTKVRMVFDNPDGRLRPGMFAQATFLS-Q-PHEGIVVPMSAIVQS--GFYTRAFVEVAPWQFEPRVIKLGAQIGDRMEVKSGLSAGDRVVVKEGVLLND--------------------
>3lnnA_101 weight: 0.3736 score: 237.1 eval: 1.4e-07 prob: n/a identity: 0.1806 startpos: 83
-------DLAQANSDAAKARAAMTMARRNLDR------QRELDKSEIAAKRDFEQAQSDYDQAAS-----ESQRADARLAQLGAKGGGTLQAghILAVRSPINGRVVDLNAATGAYWNdtASLMTVADLSHVFVTANAQEKDLGHVYVGQSATVKFDAY-DDPQPGKVRYVGQILDADTRTTKVRMVFDNPDGRLRPGMFAQATFLSQ--PHEGIVVPMSAIVQSG--FYTRAFVEVAPWQFEPRVIKLGAQIGDRMEVKSGLSAGDRVVVKEGVLLND--------------------
>3lnnA_309 weight: 0.2456 score: 18.83 eval: n/a prob: n/a identity: 0.1706 startpos: 76
LFTIDSADLAQANSDAAKARAAMTMARRNLDRQRELDK------SEIAAKRDF------------EQAQSDYDQAASESQRADARLAQLGAKGGGtaVRSPINGRVVDLNAATGAYWNDTTalMTVADLSHVFVTANAQEKDLGHVYVGQSATVKFDAYDDP-QPGKVRYVGQILDADTRTTKVRMVFDNPDGRLRPGMFAQATFLSQP--HEGIVVPMSAIV--QSGFYTRAFVEVAPWQFEPRVIKLGAQIGDRMEVKSGLSAGDRVVVKEGVLLND--------------------

Alignment cluster 2 [ RosettaCM constraints ]