LMF2 Domain 1 Parse 1 Confidence: 0.09

Job ID	Status	Method	Username	Target	Length	Date (PST)	Expiration Date (PST)
699512	Complete	Structure prediction	hamadia	LMF2	707	20 Jan 2026	6 Mar 2026
Domain ID	Domain	Parse	Confidence	Modeling Method	Model Span	Length	Date (PST)
690006	1	1	0.09	comparative modeling	1-707	707	20 Jan 2026
Cluster 3 Templates
>690006
MAGSRLPRQLFLQGVAAVFMFAFASLYTQIPGLYGPEGILPARRTLRPQGKGRWQQLWETPTLLWEAPRLGLDTAQGLELLSLLGALVALGALLLSPLRHPVIYLLLWAAYLSACQVGQVFLYFQWDSLLLETGFLAVLVAPLRPASHRKEAPQGRQAGALPHEDLPFWLVRWLLFRLMFASGVVKLTSRCPAWWGLTALTYHYETQCLPTPAAWFAHHLPVWLHKLSVVATFLIEIAVPPLFFAPIRRLRLAAFYSQVLLQVLIIITGNYNFFNLMTLVLTTALLDDQHLAAEPGHGSRKKTATSWPKALLATLSLLLELAVYGLLAYGTVHYFGLEVDWQQRTIHSRTTFTFHQFSQWLKTLTLPTVWLGVASLVWELLSALWRWTQVRGWLRKLSAVVQLSLVGTATVALFLISLVPYSYVEPGTHGRLWTGAHRLFGAVEHLQLANSYGLFRRMTGLGGRPEVVLEGSYDGHHWTEIEFMYKPGNLSRPPPVVVPHQPRLDWQMWFAALGPHTHSPWFTSLVLRLLQGKEPVIRLVQSQVARYPFHKQPPTYVRAQRYKYWFSQPGEQGQWWRRQWVEEFFPSVSLGDPTLETLLRQFGLQEKSPPRTRSANSTLAQALHWTRSQLSPLEAPALLWGLLMAVGAVRFVQALLAPCSLRSSPLAPVSGEKRRPASQKDSGAASEQATAAPNPCSSSSRTTRRKK
>m11vA_303 weight: 0.4147 score: 2.38 eval: n/a prob: n/a identity: 0.1825 startpos: 1
-----------------------------------------------------------------------------------------------------------------------------------------------------------------PHEDLPFWLVRWLLFRLMFASGVVKLTSRCPAWWGLTALTYHYETQCLPTPAAWFAHHLPVWLHKLSVVATFLIEIAVPPLFFAPIRRLRLAAFYSQVLLQVLIIITGNYNFFNLMTLVLTTALLDDQH---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
>m11vA_103 weight: 0.3421 score: 2.38 eval: n/a prob: n/a identity: 0.1825 startpos: 1
-----------------------------------------------------------------------------------------------------------------------------------------------------------------PHEDLPFWLVRWLLFRLMFASGVVKLTSRCPAWWGLTALTYHYETQCLPTPAAWFAHHLPVWLHKLSVVATFLIEIAVPPLFFAPIRRLRLAAFYSQVLLQVLIIITGNYNFFNLMTLVLTTALLDDQH---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
>m11vA_202 weight: 0.1615 score: 400.34 eval: 1e-45 prob: 100 identity: 0.1825 startpos: 1
-----------------------------------------------------------------------------------------------------------------------------------------------------------------PHEDLPFWLVRWLLFRLMFASGVVKLTSRCPAWWGLTALTYHYETQCLPTPAAWFAHHLPVWLHKLSVVATFLIEIAVPPLFFAPIRRLRLAAFYSQVLLQVLIIITGNYNFFNLMTLVLTTALLDDQH---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
>m331A_305 weight: 0.0168 score: 1.81 eval: n/a prob: n/a identity: 0.0481 startpos: 1
---------VFRFLFGFLMviPQERGLSSLDRKYLD-------------GLDVCRFP--------LLDALRPLPLDWMYLVYTIMFLGALGMMLG--LCYRISCVLFLLPYWYVFLLDKTSWN-NHSYLYGLLAFQLTFmaNHYWSVDGLLNAHRRNAHVP---LWNYAVLRGQIFIVYFIAGVKKLD---ADWVEGYSMEYLSRH----------lLSEELTSLLVVHWGGLLLDLSAGFLLFFD--VSRSIGLFFVSYFHCMNSQLFSIGMFSYVMLASSPLFCSpkLVSYCPR---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
>m16nA_306 weight: 0.0153 score: 1.68 eval: n/a prob: n/a identity: 0.0820 startpos: 1
---------VFRIFFGVMMLASIIRFWAN----------------------GWIYKLYIEPQFFFSYFGFsvKpgSYTYLLFAICGLAALFVALGLKYRIAIITFFLSFTYIELMDKS---TYLNHYYFISCLSFLMIWlrYFSLDTKYNP-----KLKLNQVPNWTVDAIKALLFIVYFYAGLAKLNS---DWlkAMPLKIW-----LPslLGNLMQQ--EWMHYAFSWSGALYDLAIPFLLLW--RRTRFLAFILVVVFHVLTRVLFPIGMFPYIMIVSALIFFDSGVHHKitSSLNVEEAKSpkGSFNKGLVGVFLVIQLLLPWRYLayRffKVVNAETGKQFYVDnfLSPLQEKQMS----------TQPDFILEYAQFLGRHFKSQGHQNIQVFVESYVALNGRRSQPYINPKVDLLQQRDNFNHKTWIL--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
>m331A_105 weight: 0.0129 score: 1.81 eval: n/a prob: n/a identity: 0.0481 startpos: 1
---------VFRFLFGFLMviPQERGLSSLDRKYLD-------------GLDVCRFP--------LLDALRPLPLDWMYLVYTIMFLGALGMMLG--LCYRISCVLFLLPYWYVFLLDKTSWN-NHSYLYGLLAFQLTFmaNHYWSVDGLLNAHRRNAHVP---LWNYAVLRGQIFIVYFIAGVKKLD---ADWVEGYSMEYLSRH----------lLSEELTSLLVVHWGGLLLDLSAGFLLFFD--VSRSIGLFFVSYFHCMNSQLFSIGMFSYVMLASSPLFCSpkLVSYCPR---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
>m16nA_106 weight: 0.0115 score: 1.68 eval: n/a prob: n/a identity: 0.0820 startpos: 1
---------VFRIFFGVMMLASIIRFWAN----------------------GWIYKLYIEPQFFFSYFGFsvKpgSYTYLLFAICGLAALFVALGLKYRIAIITFFLSFTYIELMDKS---TYLNHYYFISCLSFLMIWlrYFSLDTKYNP-----KLKLNQVPNWTVDAIKALLFIVYFYAGLAKLNS---DWlkAMPLKIW-----LPslLGNLMQQ--EWMHYAFSWSGALYDLAIPFLLLW--RRTRFLAFILVVVFHVLTRVLFPIGMFPYIMIVSALIFFDSGVHHKitSSLNVEEAKSpkGSFNKGLVGVFLVIQLLLPWRYLayRffKVVNAETGKQFYVDnfLSPLQEKQMS----------TQPDFILEYAQFLGRHFKSQGHQNIQVFVESYVALNGRRSQPYINPKVDLLQQRDNFNHKTWIL--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
>m0clA_310 weight: 0.0108 score: 0.76 eval: n/a prob: n/a identity: 0.0537 startpos: 1
-----LLNRPTDPASLAVFRFLFGFLMVLDIPQERGLSS--LDRKYLDGLDVCrdALRPLP-------------LDWMYLVYTIMFLGALGMML--GLCYRISCVLFLLPYWYVFLLDKTSwhS---YLYGLLAFQLTFmaNHYWSVDGLLNAHRRNAH---VPLWNYAVLRGQIFIVYFIAGVKKLD--------------------------------ADWvlLVVHWGGLLLDLSAGFLLF--FDVSRSIGLFFVSYFHCMNSQLFSIGMFSYVMLASSPLFCSPEWPRKLVS---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
>m0clA_110 weight: 0.0089 score: 0.76 eval: n/a prob: n/a identity: 0.0537 startpos: 1
-----LLNRPTDPASLAVFRFLFGFLMVLDIPQERGLSS--LDRKYLDGLDVCrdALRPLP-------------LDWMYLVYTIMFLGALGMML--GLCYRISCVLFLLPYWYVFLLDKTSwhS---YLYGLLAFQLTFmaNHYWSVDGLLNAHRRNAH---VPLWNYAVLRGQIFIVYFIAGVKKLD--------------------------------ADWvlLVVHWGGLLLDLSAGFLLF--FDVSRSIGLFFVSYFHCMNSQLFSIGMFSYVMLASSPLFCSPEWPRKLVS---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
>m331A_204 weight: 0.0014 score: 226.82 eval: 3.1e-24 prob: 99.91 identity: 0.0438 startpos: 1
---------VFRFLFGFLMVLDIPQelSSLDRKYLdlDVCRFPLLD------------------ALRP----LPLDWMYLVYTIMFLGALGM-M-LGLCYRISCVLFLLPYWYVFLLDKTSW-NNHSYLYGLLAFQLTFM-DANhvDGLLNA----HRRNAHVPLWNYAVLRGQIFIVYFIAGVKKL---DADWVEGYSMEyhWLFSPFKLL--L---SEELTSLLVVHWGGLLLDLSAGFLLFF--DVSRSIGLFFVSYFHCMNSQLFSIGMFSYVMLASSPLFCSPEWPRKLVSYCPR-----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
>m16nA_205 weight: 0.0011 score: 53.34 eval: 2.4 prob: 93.89 identity: 0.1018 startpos: 1
-----VFRIFF--G--VMMLASIIRFW--ANGWIYKLYIEPQF-FF------------SYFGFSWVKPL-----GSYTYLLFAICGLAALFVALGLKYRIAIITFFLSFTYIELMD--KST-YLNHYYFISCLSFLMIWLPANRYfdTKYN----PKLKLNQVPNWTVDAIKALLFIVYFYAGLAKLNS---DWLVkmPLKIWLPSK-YDLplGNLMQQ--EWMHYAFSWSGALYDLAIPFLLL--WRRTRFLAFILVVVFHVLTRVLFPIGMFPYIMIVSALIFFDSGVHHKILaiETseEAKSP-NKYKGSFNklVGVFLVIQLLLPWRYLAYPGELFWTefYVDNSDFLSPLQEKQMSTQ---PDFIL-------EYAQFLGRHFKSQGH---------------------------------------------------------------------QNIQVFVevALNGRRSQP---YINpvDLLQQRDNF-------------------NHKTWIL----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
>m0clA_206 weight: 0.0010 score: 42.95 eval: 20 prob: 69.43 identity: 0.0424 startpos: 2
LNRppASLAVFRFLFGFLMVLDI----------------------PQERGLSSLDRKYLDGLddALRPL----PLDWMYLVYTIMFLGALGMMLGLCYRISCVLFLLPYWYVFLL--DKTSW-NNHSYLYGLLAFQLTFMDANHY-----WSVDGlhRRNAHVPLWNYAVLRGQIFIVYFIAGVKKLDAD---WVEG--SW----SE--ELTSL-----------LVVHWGGLLLDLSAGFLLFF--DVSRSIGLFFVSYFHCMNSQLFSIGMFSYVMLASSPLFCSPEWPRKLVS---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
>m580A_207 weight: 0.0010 score: 31 eval: 220 prob: 65.49 identity: 0.0325 startpos: 1
-----------------------------------------------------------------------------------------------------------------------------------------------------------------LQEPLIHWALRSFLAALFATAALSKLTG-------MEEFHGVVRNFRL----------LPDMASRAVAMVLPVAELAVAAGLMIPAL-AAP-AALAAAALLgfGLA-------------IAVNVLRgtQI----DCGCFRNGMK---QR-ISWAMVARNAV-LTAMALGAAA--LLP---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
>m683A_209 weight: 0.0010 score: 24.21 eval: n/a prob: 32.57 identity: 0.0311 startpos: 1
---------------------------------------------------------------------------------------------------------------------------------------------------------------------MISIMMKVSLAVFMLAGGIIKVSRV-------PFQVEHWRHYQYP-----------LWF----LTVTGILEIAGALAMTAGirYAAIGAGVLFVVLMAGAIHAHMF-------------RARQSV------------------I---MAIQAMICLIVSIMIIMG---SYT-----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
Alignment cluster 3 [ RosettaCM constraints ]