SSGCID - MygeA.01545.a Ribosomal RNA small subunit methyltransferase H MG_222 Domain 1 Parse 1 Confidence: 0.93
| Job ID | Status | Method | Username | Target | Length | Date (PST) | Expiration Date (PST) |
|---|
| 10493 | Complete | Structure prediction | ssgcid | SSGCID - MygeA.01545.a Ri... | 309 | 4 Nov 2019 | - |
| Domain ID | Domain | Parse | Confidence | Modeling Method | Model Span | Length | Date (PST) |
|---|
| 10858 | 1 | 1 | 0.93 | comparative modeling | 1-309 | 309 | 10 Nov 2019 |
1 . 10 . 20 . 30 . 40 . 50 . 60 . 70 . 80 . 90 . 100 . 110 . 120 . 130 . 140 . 150 . 160 . 170 . 180 . 190 . 200 . 210 . 220 . 230 . 240 . 250 . 260 . 270 . 280 . 290 . 300 .
sequence: MLNNQQIHQSVLINEVIHNLNINPCGNYLDLTAGFAGHSQKILEKLTTGTLTINDVDKESINFCQKLFFKNNNVVIIHDNFANFPVHLKQLSITKFDGILMDLGVSSHQLNQPNRGFSFKNDGPIDMRMDQSNQKNTALTVLKNLTEQKLSLILKKYGDIKHPKPIAIGLKKAVQTEKNLTTTQLAKVVKECATGFEKYQSRNYLAKVFQAIRIYLNDEITNLKTALTFIPNLLKNNSRFLVIVFHSIEEKIVRNFIAKLTSFIQPEALPIKLTPAYQLITKKPILPSQKELELNPRSRSAKLFVIQKN
deepconcnf: ----------HHHHHHHHH-------EEEEEE-----HHHHHHHH----EEEEEE--HHHHHHHHHH------EEEEE-----HHHHHHH-------EEEEE-----------------------------------HHHHHH---HHHHHHHHHHH------HHHHHHHHHHHH------HHHHHHHHHHH-----------HHHHHHHHHHHHHHHHHHHHHHHHHHHHHH-EE-EEEEEEE---HHHHHHHHHHHHH----------------EEEEE-------HHHHHH----HHHHHHHHH--
psipred: ---------EEHHHHHHHHH------EEEE------HHHHHHHHH----EEEEEE--HHHHHHHHHHH-----EEEE---HHHHHHHHHH-------EEEEE----HHH----------------------------HHHHH----HHHHHHHHHHH--HHHHHHHHHHHHHHH-------HHHHHHHHHHH--HHH--------HHHHHHHHHHHHHHHHHHHHHHHHHHHHH-----EEEEEE--HHHHHHHHHHHHHH---------------EEEE--------HHHHHH---HHHHHHHHH---
spider3: --------EE-HHHHHHHHH------EEEE------HHHHHHHHH----EEEEEE--HHHHHHHHHHHH----EEEE------HHHHHHH-------EEEEE----HHHH---------------------------HHHHHHH--HHHHHHHHHHH-----HHHHHHHHHHHHH------HHHHHHHHHHH--HHHH-----HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHEEEEEEEEEEEE--HHHHHHHHHHHHH----------------EEE---------HHHHHH-------EEEEEEE-
>10858
MLNNQQIHQSVLINEVIHNLNINPCGNYLDLTAGFAGHSQKILEKLTTGTLTINDVDKESINFCQKLFFKNNNVVIIHDNFANFPVHLKQLSITKFDGILMDLGVSSHQLNQPNRGFSFKNDGPIDMRMDQSNQKNTALTVLKNLTEQKLSLILKKYGDIKHPKPIAIGLKKAVQTEKNLTTTQLAKVVKECATGFEKYQSRNYLAKVFQAIRIYLNDEITNLKTALTFIPNLLKNNSRFLVIVFHSIEEKIVRNFIAKLTSFIQPEALPIKLTPAYQLITKKPILPSQKELELNPRSRSAKLFVIQKN
>1m6yA_201 weight: 0.3445 score: 609.01 eval: 1e-45 prob: 100 identity: 0.3463 startpos: 1
-RKYSQRHIPVMVREVIEFLKPEDEKIILDCTVGEGGHSRAILEHCPGCRIIGIDVDSEVLRIAEEKLKEfdRVSLFKVSYREADFLLKTLGIEKVDGILMDLGVSTYQLKGENRGFTFEREEPLDMRMDLES-EVTAQKVLNELPEEELARIIFEYGEerFARRIARKIVENR---PLNTTLDLVKAVREALPSYEirRKRHFATKTFQAIRIYVNRELENLKEFLKKAEDLLNPGGRIVVISFHSLEDRIVKETFRNS--------------KKLRILTEKPVRPSEEEIRENPRARSGRLRAAERI
>1m6yA_101 weight: 0.3100 score: 311.3 eval: 9.4e-09 prob: n/a identity: 0.3495 startpos: 4
----SQRHIPVMVREVIEFLKPEDEKIILDCTVGEGGHSRAILEHCPGCRIIGIDVDSEVLRIAEEKLkfSDRVSLFKVSYREADFLLKTLGIEKVDGILMDLGVSTYQLKGENRGFTFEREEPLDMRMDLES-EVTAQKVLNELPEEELARIIFEYGEEkfARRIARKIVENR---PLNTTLDLVKAVREALPSYEIRrkRHFATKTFQAIRIYVNRELENLKEFLKKAEDLLNPGGRIVVISFHSLEDRIVKETFRNS--------------KKLRILTEKPVRPSEEEIRENPRARSGRLRAAERI
>1m6yA_301 weight: 0.3029 score: 33.9 eval: n/a prob: n/a identity: 0.3463 startpos: 1
-RKYSQRHIPVMVREVIEFLKPEDEKIILDCTVGEGGHSRAILEHCPGCRIIGIDVDSEVLRIAEEKLKesDRVSLFKVSYREADFLLKTLGIEKVDGILMDLGVSTYQLKGENRGFTFEREEPLDMRMDLESE-VTAQKVLNELPEEELARIIFEYGEerFARRIARKIVENR---PLNTTLDLVKAVREALPSYEIRrkRHFATKTFQAIRIYVNRELENLKEFLKKAEDLLNPGGRIVVISFHSLEDRIVKETFRNS--------------KKLRILTEKPVRPSEEEIRENPRARSGRLRAAERI
>3tkaA_102 weight: 0.0089 score: 303.5 eval: 1.5e-08 prob: n/a identity: 0.3107 startpos: 1
--------TTVLLDEAVNGLNIRPDGIYIDGTFGRGGHSRLILSQLgeGRLLAIDRDPQAIAVAKTID--DPRFSIIHGPFSALGEYVAERDLikIDGILLDLGVSSPQLDDAERGFSFMRDGPLDMRMDPTR-GQSAAEWLQTAEEADIAWVLKTYGEERFAKRIARAIVERNREQPMTRTKELAEVVAAATPV------KHPATRTFQAVRIWVNSELEEIEQALKSSLNVLAPGGRLSIISFHSLEDRIVKRFMRENS-----------RGRQLRALG--KLMPGEEEVAENPRARSSVLRIAERT
>1wg8A_302 weight: 0.0076 score: 32.03 eval: n/a prob: n/a identity: 0.3430 startpos: 1
-----MTHVPVLYQEALDLLAVRPGGVYVDATLGGAGHARGILER--GGRVIGLDQDPEAVARAKGL--HLPGLTVVQGNFRHLKRHLAALGVERVDGILADLGVSSFHLDDPSRGFSYQKEGPLDMRMGLEGP--TAKEVVNRLPLEALARLLRELGEEPQAYRIARAIVAAREKAPIETTTQLAEIVRKAVG---FRRAGHPARKTFQALRIYVNDELNALKEFLEQAAEVLAPGGRLVVIAFHSLEDRVVKRFLRESG---------------LKVLTKKPLVPSEKEAAQNPRARSAKLRAAEKE
>3tkaA_202 weight: 0.0065 score: 394.77 eval: 1e-45 prob: 100 identity: 0.3139 startpos: 1
--------TTVLLDEAVNGLNIRPDGIYIDGTFGRGGHSRLILSQLgeGRLLAIDRDPQAIAVAKTI--DDPRFSIIHGPFSALGEYVAERDlgKIDGILLDLGVSSPQLDDAERGFSFMRDGPLDMRMDPTRG-QSAAEWLQTAEEADIAWVLKTYGEERFAKRIARAIVERNREQPMTRTKELAEVVAAATP------VKHPATRTFQAVRIWVNSELEEIEQALKSSLNVLAPGGRLSIISFHSLEDRIVKRFMRENSRG-----------RQLRALGK-L-MPGEEEVAENPRARSSVLRIAERT
>1wg8A_103 weight: 0.0055 score: 292.5 eval: 3.2e-08 prob: n/a identity: 0.3430 startpos: 1
-----MTHVPVLYQEALDLLAVRPGGVYVDATLGGAGHARGILER--GGRVIGLDQDPEAVARAKGLH--LPGLTVVQGNFRHLKRHLAALGVERVDGILADLGVSSFHLDDPSRGFSYQKEGPLDMRMGLE--GPTAKEVVNRLPLEALARLLRELGEEPQAYRIARAIVAAREKAPIETTTQLAEIVRKAVGF---RRAGHPARKTFQALRIYVNDELNALKEFLEQAAEVLAPGGRLVVIAFHSLEDRVVKRFLRES---------------GLKVLTKKPLVPSEKEAAQNPRARSAKLRAAEKE
>3tkaA_303 weight: 0.0042 score: 31.16 eval: n/a prob: n/a identity: 0.3139 startpos: 1
--------TTVLLDEAVNGLNIRPDGIYIDGTFGRGGHSRLILSQleEGRLLAIDRDPQAIAVAKTI--DDPRFSIIHGPFSALGEYVAERDlgKIDGILLDLGVSSPQLDDAERGFSFMRDGPLDMRMDP-TRGQSAAEWLQTAEEADIAWVLKTYGEERFAKRIARAIVERNREQPMTRTKELAEVVAAATP------VKHPATRTFQAVRIWVNSELEEIEQALKSSLNVLAPGGRLSIISFHSLEDRIVKRFMRENSR-----------GRQLRALGKLM--PGEEEVAENPRARSSVLRIAERT
>4pooA_304 weight: 0.0026 score: 5 eval: n/a prob: n/a identity: 0.0712 startpos: 1
--------ILPYSKELLKMAA-GEGDIVIDATMGNGHDTQFLAELveNGHVYAFDIQESAVANTKERLGEaaRTTLFHKSHDKIAKSLPPETHGKVAAAVFNLG------------------------YLPGGDITT---------------------------------------N------------------------------------------GSSTIKAIEQLLSIMKDEGLIVLVVYHE--GKAEKNDVLDFCRNLDQQAARVLTYGFINQQNDPPFIVAIEKKA----------------
>1wg8A_203 weight: 0.0025 score: 829.68 eval: 1e-45 prob: 100 identity: 0.3430 startpos: 1
-----MTHVPVLYQEALDLLAVRPGGVYVDATLGGAGHARGILER--GGRVIGLDQDPEAVARAKGLHLP--GLTVVQGNFRHLKRHLAALGVERVDGILADLGVSSFHLDDPSRGFSYQKEGPLDMRMGLE--GPTAKEVVNRLPLEALARLLRELGEEPQAYRIARAIVAAREKAPIETTTQLAEIVRKAVGF---RRAGHPARKTFQALRIYVNDELNALKEFLEQAAEVLAPGGRLVVIAFHSLEDRVVKRFLRE---------------SGLKVLTKKPLVPSEKEAAQNPRARSAKLRAAEKE
>3eeyA_305 weight: 0.0019 score: 4.92 eval: n/a prob: n/a identity: 0.0712 startpos: 1
------LTIKNSLGQSHDYIkvKEGDTVVDATCGNGNDTAFLASLveNGRVFGFDIQDKAIANTTKKLTDLnrVTLIKDGHQNMDKYID----CPVKAVMFNLG------------------------YLPSGD------------------------------------------HSISTR-------------------------------------PETTIQALSKAMELLVTGGIITVVIYYgdTGFEEKEKVLEFLK-GVDQKK----FIVQRTDFINQANCPPILVCIEKISEGHHHHHH---
>3lbyA_306 weight: 0.0016 score: 4.76 eval: n/a prob: n/a identity: 0.0874 startpos: 1
-------MIKRPIELSHDFLslDKNSIAIDATMGNGNDTVFLSHLAK--KVYAFDVQEQALIKTREKLEQlkNVQLILDGHQTINKYVT----EPIRAAIFNLG-----------------------YLPSASVITQ----------------------------------------------------------------------------------PATTLTAIKKILERLEIGGRLAIMVYydKEKDAVLNFVKELDQ----QHFTVmtPPFLVMIEKL--------------------------
>1sqgA_310 weight: 0.0013 score: 4.17 eval: n/a prob: n/a identity: 0.0874 startpos: 219
FEDGWVTVQDASAQGCMTWLAPQNGEHILDLCAAPGGKTTHILEVAPEAQVVAVDIDEQRLSRVYDNLKRlmKATVKQGDGRYPSQWCGE---QQFDRILLDAPCSAT-------GVIRRHPD-----------------IKWLRRDRD------------------------------------------------------------------IPELAQLQSEILDAIWPHLKTGGTLVYasVLPEENSLQIKAFLQRT-----ADAELCETGtgKQNL--PGAEEGDGFFYAKLIK----------
>10858
MLNNQQIHQSVLINEVIHNLNINPCGNYLDLTAGFAGHSQKILEKLTTGTLTINDVDKESINFCQKLFFKNNNVVIIHDNFANFPVHLKQLSITKFDGILMDLGVSSHQLNQPNRGFSFKNDGPIDMRMDQSNQKNTALTVLKNLTEQKLSLILKKYGDIKHPKPIAIGLKKAVQTEKNLTTTQLAKVVKECATGFEKYQSRNYLAKVFQAIRIYLNDEITNLKTALTFIPNLLKNNSRFLVIVFHSIEEKIVRNFIAKLTSFIQPEALPIKLTPAYQLITKKPILPSQKELELNPRSRSAKLFVIQKN
>5wp4A_104 weight: 0.6290 score: 128.2 eval: 0.0013 prob: n/a identity: 0.0971 startpos: 263
----------ETTKEFVEKMNLKPGQKVLDVGCGIGGGDFYMAEKF-DVHVVGIDLSVNMISFALERAilSCSVEFEVADCTTKHY-----PDNSFDVIYSRDTIL--HIQDKPALFR-kPGGKVLISDYCRS----------kTPSAEFSEYIKQryDLHDVQAYGQMLKDAG--iAEDRTDQFMQVLKRELD--------RVEKEKEKFISDFSKEDYDDIVGGWKSKLERCAseQKWGLFIANK--------------------------------------------------------------
>2fk8A_307 weight: 0.2325 score: 4.41 eval: n/a prob: n/a identity: 0.0550 startpos: 30
PELTLEEAQYAKVDLNLDKLDLKPGMTLLDIGCGWGTTMRRAVERFD-VNVIGLTLSKNQHARCEQVLASirSRQVLLQGWEDFA--------EPVDRIVSIE-------------------------------------AFEHFGHENYDDFFKRCfyhfETARFIKFIVTEipGGRLPSTEMMVEHGEKA---GFTVPEPlhYIKTLRIWGDTLQsvYNRYMKYLRGCEHYFTDEmdCSLVTYLKPGAAA---------------------------------------------------------
>4ineA_105 weight: 0.0243 score: 127.8 eval: 0.0013 prob: n/a identity: 0.0874 startpos: 204
-------GYDENLKIIKRFGDFKPGQTMLDIGVGIGGGARQVADEF-GVHVHGIDLSSNMLAIALERLhkDSRVKYSITDALVYQFE-----DNSFDYVFSRDCIQ--HIPDTEKLFS-kPGGKVLITMYGKG-----------eQSDKFKTYVAQryFLKNLKEIADIANKTGF-qTENMTPRFKEILLEERG---------HLEQNEAEFMSKfqRERDSLISGWTDKLGYIEKDNHNWNFFLAQ--------------------------------------------------------------
>3ujcA_106 weight: 0.0207 score: 127.4 eval: 0.0013 prob: n/a identity: 0.0809 startpos: 34
----------EATKKILSDIELNENSKVLDIGSGLGGGCMYINEKY-GAHTHGIDICSNIVNMANERVSGNNKIIFEANDILTKEF-----PENNFDLIYSRDAILALSLENKN-yKWLKPTGTLLITDYCATEKE--------NWDDEFKEYVKQryTLITVEEYADILTACN--vSKDLSDYWNQLLEVEHKY--------LHENKEEFLKLFSEKKFISLDDGWSRKIKDSKRKMQRWGYFKATKN------------------------------------------------------------
>4ineB_107 weight: 0.0189 score: 126.6 eval: 0.0014 prob: n/a identity: 0.0809 startpos: 201
-------GYDENLKIIKRFGDFKPGQTMLDIGVGIGGGARQVADEF-GVHVHGIDLSSNMLAIALERLhkDSRVKYSITDALVYQFE-----DNSFDYVFSRDCIQ--HIPDTE-yKALKPGGKVLITMYGKG-----------eQSDKFKTYVAQryFLKNLKEIADIANKTGF-qTENMTPRFKEILLEERG---------HLEQNEAEFMSKfqRERDSLISGWTDKLGYIEKDNHNWNFFLAQK-------------------------------------------------------------
>4kriC_108 weight: 0.0180 score: 126.6 eval: 0.0014 prob: n/a identity: 0.0647 startpos: 200
-------GWNQNLAILKRFGPMKTGQRMLDIGVGIGGGARQAASEF-GLQVHGVDLSTNMLAVALERVhkDARVTYAVCDACEYEFE-----PNSFDYVFSRDCIQ--HIKDTD-yRALKPGGKVLITMYGVG-----------tLSESFKEYVSQryYLKNLEQIEEIAKKTGfiEVENMTPRFKEILLEERE---------RIEQDKETFLAKfqNAYDGLVSGWKSKLQYIADDNHNWNFFAAVK-------------------------------------------------------------
>4iv0A_109 weight: 0.0175 score: 126.1 eval: 0.0014 prob: n/a identity: 0.0777 startpos: 40
------------TTKILSDIQLDANSKVLDIGSGLGGGCKYINEKY-GAHVHGVDICEKMVTIAKLRNQDKAKIEFEAKDILKKD-----FPESTFDMIYSRDSILHLSYADKK-yKWLKPNGILLITDYCAD-----------nWDEEFKAYIKKryTLMPIQEYGDLIKSCKfvEAKDISDYWLELLQLELSK--------LEEKKEEFLKVYSIKEYNSLKDGWTRKIKDTKrlQKWGYFKAQKMI------------------------------------------------------------
>3ujdA_110 weight: 0.0172 score: 126.1 eval: 0.0014 prob: n/a identity: 0.0809 startpos: 33
----------EATKKILSDIELNENSKVLDIGSGLGGGCMYINEKY-GAHTHGIDICSNIVNMANERVSGNNKIIFEANDILTKEF-----PENNFDLIYSRDAILHLSLENKN-yKWLKPTGTLLITDYCATEKE--------NWDDEFKEYVKQryTLITVEEYADILTACN--vSKDLSDYWNQLLEVEHKY--------LHENKEEFLKLFSEKKFISLDDGWSRKIKDSKRKMQRWGYFKATKN------------------------------------------------------------
>4iv8A_308 weight: 0.0111 score: 4.36 eval: n/a prob: n/a identity: 0.0939 startpos: 10
GEDYISSGGIVATTKILSDIYLEPNSKVLDIGSGLGGGCKYINEKYD-AHVYGVDICEKMIAIAKLRNKDKSKVEFEAMD-------ILKKDFptFDMIYSRDA-------------------------------------ILHLPYADKKKLFEKCykIENWDE---EFKAYINKRKYtpIQDYGDLIKSC-NFQNVQAKDIswLELLQMELNKLEeeYNSLKDGWTRKIKDTKRhqKWGYFKAQKMV------------------------------------------------------------
>3hemA_309 weight: 0.0108 score: 4.35 eval: n/a prob: n/a identity: 0.0809 startpos: 38
PDMTLEEAQYAKRKLALDKLNLEPGMTLLDIGCGWGSTMRHAVAEYD-VNVIGLTLSENQYAHDKAMFDEvrRKEVRIQGWEEFD--------EPVDRIVSLGAFEHFADGAGDAGflTPDDGRmiTIPdlGLTSpfIKFILTepRISQVDYYSSNAgiGANYVPTLNAWADALQAH------------KDEAIALKGQ------------------ETCDIYMHYLRGCSDLFRDKydVCQFTLVK--------------------------------------------------------------
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