SSGCID - MygeA.01545.a Ribosomal RNA small subunit methyltransferase H MG

SSGCID - MygeA.01545.a Ribosomal RNA small subunit methyltransferase H MG_222 Domain 1 Parse 1 Confidence: 0.93

Job ID	Status	Method	Username	Target	Length	Date (PST)	Expiration Date (PST)
10493	Complete	Structure prediction	ssgcid	SSGCID - MygeA.01545.a Ri...	309	4 Nov 2019	-

Domain ID	Domain	Parse	Confidence	Modeling Method	Model Span	Length	Date (PST)
10858	1	1	0.93	comparative modeling	1-309	309	10 Nov 2019

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   sequence: MLNNQQIHQSVLINEVIHNLNINPCGNYLDLTAGFAGHSQKILEKLTTGTLTINDVDKESINFCQKLFFKNNNVVIIHDNFANFPVHLKQLSITKFDGILMDLGVSSHQLNQPNRGFSFKNDGPIDMRMDQSNQKNTALTVLKNLTEQKLSLILKKYGDIKHPKPIAIGLKKAVQTEKNLTTTQLAKVVKECATGFEKYQSRNYLAKVFQAIRIYLNDEITNLKTALTFIPNLLKNNSRFLVIVFHSIEEKIVRNFIAKLTSFIQPEALPIKLTPAYQLITKKPILPSQKELELNPRSRSAKLFVIQKN
 deepconcnf: ----------HHHHHHHHH-------EEEEEE-----HHHHHHHH----EEEEEE--HHHHHHHHHH------EEEEE-----HHHHHHH-------EEEEE-----------------------------------HHHHHH---HHHHHHHHHHH------HHHHHHHHHHHH------HHHHHHHHHHH-----------HHHHHHHHHHHHHHHHHHHHHHHHHHHHHH-EE-EEEEEEE---HHHHHHHHHHHHH----------------EEEEE-------HHHHHH----HHHHHHHHH--
    psipred: ---------EEHHHHHHHHH------EEEE------HHHHHHHHH----EEEEEE--HHHHHHHHHHH-----EEEE---HHHHHHHHHH-------EEEEE----HHH----------------------------HHHHH----HHHHHHHHHHH--HHHHHHHHHHHHHHH-------HHHHHHHHHHH--HHH--------HHHHHHHHHHHHHHHHHHHHHHHHHHHHH-----EEEEEE--HHHHHHHHHHHHHH---------------EEEE--------HHHHHH---HHHHHHHHH---
    spider3: --------EE-HHHHHHHHH------EEEE------HHHHHHHHH----EEEEEE--HHHHHHHHHHHH----EEEE------HHHHHHH-------EEEEE----HHHH---------------------------HHHHHHH--HHHHHHHHHHH-----HHHHHHHHHHHHH------HHHHHHHHHHH--HHHH-----HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHEEEEEEEEEEEE--HHHHHHHHHHHHH----------------EEE---------HHHHHH-------EEEEEEE-

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>10858
MLNNQQIHQSVLINEVIHNLNINPCGNYLDLTAGFAGHSQKILEKLTTGTLTINDVDKESINFCQKLFFKNNNVVIIHDNFANFPVHLKQLSITKFDGILMDLGVSSHQLNQPNRGFSFKNDGPIDMRMDQSNQKNTALTVLKNLTEQKLSLILKKYGDIKHPKPIAIGLKKAVQTEKNLTTTQLAKVVKECATGFEKYQSRNYLAKVFQAIRIYLNDEITNLKTALTFIPNLLKNNSRFLVIVFHSIEEKIVRNFIAKLTSFIQPEALPIKLTPAYQLITKKPILPSQKELELNPRSRSAKLFVIQKN
>1m6yA_201 weight: 0.3445 score: 609.01 eval: 1e-45 prob: 100 identity: 0.3463 startpos: 1
-RKYSQRHIPVMVREVIEFLKPEDEKIILDCTVGEGGHSRAILEHCPGCRIIGIDVDSEVLRIAEEKLKEfdRVSLFKVSYREADFLLKTLGIEKVDGILMDLGVSTYQLKGENRGFTFEREEPLDMRMDLES-EVTAQKVLNELPEEELARIIFEYGEerFARRIARKIVENR---PLNTTLDLVKAVREALPSYEirRKRHFATKTFQAIRIYVNRELENLKEFLKKAEDLLNPGGRIVVISFHSLEDRIVKETFRNS--------------KKLRILTEKPVRPSEEEIRENPRARSGRLRAAERI
>1m6yA_101 weight: 0.3100 score: 311.3 eval: 9.4e-09 prob: n/a identity: 0.3495 startpos: 4
----SQRHIPVMVREVIEFLKPEDEKIILDCTVGEGGHSRAILEHCPGCRIIGIDVDSEVLRIAEEKLkfSDRVSLFKVSYREADFLLKTLGIEKVDGILMDLGVSTYQLKGENRGFTFEREEPLDMRMDLES-EVTAQKVLNELPEEELARIIFEYGEEkfARRIARKIVENR---PLNTTLDLVKAVREALPSYEIRrkRHFATKTFQAIRIYVNRELENLKEFLKKAEDLLNPGGRIVVISFHSLEDRIVKETFRNS--------------KKLRILTEKPVRPSEEEIRENPRARSGRLRAAERI
>1m6yA_301 weight: 0.3029 score: 33.9 eval: n/a prob: n/a identity: 0.3463 startpos: 1
-RKYSQRHIPVMVREVIEFLKPEDEKIILDCTVGEGGHSRAILEHCPGCRIIGIDVDSEVLRIAEEKLKesDRVSLFKVSYREADFLLKTLGIEKVDGILMDLGVSTYQLKGENRGFTFEREEPLDMRMDLESE-VTAQKVLNELPEEELARIIFEYGEerFARRIARKIVENR---PLNTTLDLVKAVREALPSYEIRrkRHFATKTFQAIRIYVNRELENLKEFLKKAEDLLNPGGRIVVISFHSLEDRIVKETFRNS--------------KKLRILTEKPVRPSEEEIRENPRARSGRLRAAERI
>3tkaA_102 weight: 0.0089 score: 303.5 eval: 1.5e-08 prob: n/a identity: 0.3107 startpos: 1
--------TTVLLDEAVNGLNIRPDGIYIDGTFGRGGHSRLILSQLgeGRLLAIDRDPQAIAVAKTID--DPRFSIIHGPFSALGEYVAERDLikIDGILLDLGVSSPQLDDAERGFSFMRDGPLDMRMDPTR-GQSAAEWLQTAEEADIAWVLKTYGEERFAKRIARAIVERNREQPMTRTKELAEVVAAATPV------KHPATRTFQAVRIWVNSELEEIEQALKSSLNVLAPGGRLSIISFHSLEDRIVKRFMRENS-----------RGRQLRALG--KLMPGEEEVAENPRARSSVLRIAERT
>1wg8A_302 weight: 0.0076 score: 32.03 eval: n/a prob: n/a identity: 0.3430 startpos: 1
-----MTHVPVLYQEALDLLAVRPGGVYVDATLGGAGHARGILER--GGRVIGLDQDPEAVARAKGL--HLPGLTVVQGNFRHLKRHLAALGVERVDGILADLGVSSFHLDDPSRGFSYQKEGPLDMRMGLEGP--TAKEVVNRLPLEALARLLRELGEEPQAYRIARAIVAAREKAPIETTTQLAEIVRKAVG---FRRAGHPARKTFQALRIYVNDELNALKEFLEQAAEVLAPGGRLVVIAFHSLEDRVVKRFLRESG---------------LKVLTKKPLVPSEKEAAQNPRARSAKLRAAEKE
>3tkaA_202 weight: 0.0065 score: 394.77 eval: 1e-45 prob: 100 identity: 0.3139 startpos: 1
--------TTVLLDEAVNGLNIRPDGIYIDGTFGRGGHSRLILSQLgeGRLLAIDRDPQAIAVAKTI--DDPRFSIIHGPFSALGEYVAERDlgKIDGILLDLGVSSPQLDDAERGFSFMRDGPLDMRMDPTRG-QSAAEWLQTAEEADIAWVLKTYGEERFAKRIARAIVERNREQPMTRTKELAEVVAAATP------VKHPATRTFQAVRIWVNSELEEIEQALKSSLNVLAPGGRLSIISFHSLEDRIVKRFMRENSRG-----------RQLRALGK-L-MPGEEEVAENPRARSSVLRIAERT
>1wg8A_103 weight: 0.0055 score: 292.5 eval: 3.2e-08 prob: n/a identity: 0.3430 startpos: 1
-----MTHVPVLYQEALDLLAVRPGGVYVDATLGGAGHARGILER--GGRVIGLDQDPEAVARAKGLH--LPGLTVVQGNFRHLKRHLAALGVERVDGILADLGVSSFHLDDPSRGFSYQKEGPLDMRMGLE--GPTAKEVVNRLPLEALARLLRELGEEPQAYRIARAIVAAREKAPIETTTQLAEIVRKAVGF---RRAGHPARKTFQALRIYVNDELNALKEFLEQAAEVLAPGGRLVVIAFHSLEDRVVKRFLRES---------------GLKVLTKKPLVPSEKEAAQNPRARSAKLRAAEKE
>3tkaA_303 weight: 0.0042 score: 31.16 eval: n/a prob: n/a identity: 0.3139 startpos: 1
--------TTVLLDEAVNGLNIRPDGIYIDGTFGRGGHSRLILSQleEGRLLAIDRDPQAIAVAKTI--DDPRFSIIHGPFSALGEYVAERDlgKIDGILLDLGVSSPQLDDAERGFSFMRDGPLDMRMDP-TRGQSAAEWLQTAEEADIAWVLKTYGEERFAKRIARAIVERNREQPMTRTKELAEVVAAATP------VKHPATRTFQAVRIWVNSELEEIEQALKSSLNVLAPGGRLSIISFHSLEDRIVKRFMRENSR-----------GRQLRALGKLM--PGEEEVAENPRARSSVLRIAERT
>4pooA_304 weight: 0.0026 score: 5 eval: n/a prob: n/a identity: 0.0712 startpos: 1
--------ILPYSKELLKMAA-GEGDIVIDATMGNGHDTQFLAELveNGHVYAFDIQESAVANTKERLGEaaRTTLFHKSHDKIAKSLPPETHGKVAAAVFNLG------------------------YLPGGDITT---------------------------------------N------------------------------------------GSSTIKAIEQLLSIMKDEGLIVLVVYHE--GKAEKNDVLDFCRNLDQQAARVLTYGFINQQNDPPFIVAIEKKA----------------
>1wg8A_203 weight: 0.0025 score: 829.68 eval: 1e-45 prob: 100 identity: 0.3430 startpos: 1
-----MTHVPVLYQEALDLLAVRPGGVYVDATLGGAGHARGILER--GGRVIGLDQDPEAVARAKGLHLP--GLTVVQGNFRHLKRHLAALGVERVDGILADLGVSSFHLDDPSRGFSYQKEGPLDMRMGLE--GPTAKEVVNRLPLEALARLLRELGEEPQAYRIARAIVAAREKAPIETTTQLAEIVRKAVGF---RRAGHPARKTFQALRIYVNDELNALKEFLEQAAEVLAPGGRLVVIAFHSLEDRVVKRFLRE---------------SGLKVLTKKPLVPSEKEAAQNPRARSAKLRAAEKE
>3eeyA_305 weight: 0.0019 score: 4.92 eval: n/a prob: n/a identity: 0.0712 startpos: 1
------LTIKNSLGQSHDYIkvKEGDTVVDATCGNGNDTAFLASLveNGRVFGFDIQDKAIANTTKKLTDLnrVTLIKDGHQNMDKYID----CPVKAVMFNLG------------------------YLPSGD------------------------------------------HSISTR-------------------------------------PETTIQALSKAMELLVTGGIITVVIYYgdTGFEEKEKVLEFLK-GVDQKK----FIVQRTDFINQANCPPILVCIEKISEGHHHHHH---
>3lbyA_306 weight: 0.0016 score: 4.76 eval: n/a prob: n/a identity: 0.0874 startpos: 1
-------MIKRPIELSHDFLslDKNSIAIDATMGNGNDTVFLSHLAK--KVYAFDVQEQALIKTREKLEQlkNVQLILDGHQTINKYVT----EPIRAAIFNLG-----------------------YLPSASVITQ----------------------------------------------------------------------------------PATTLTAIKKILERLEIGGRLAIMVYydKEKDAVLNFVKELDQ----QHFTVmtPPFLVMIEKL--------------------------
>1sqgA_310 weight: 0.0013 score: 4.17 eval: n/a prob: n/a identity: 0.0874 startpos: 219
FEDGWVTVQDASAQGCMTWLAPQNGEHILDLCAAPGGKTTHILEVAPEAQVVAVDIDEQRLSRVYDNLKRlmKATVKQGDGRYPSQWCGE---QQFDRILLDAPCSAT-------GVIRRHPD-----------------IKWLRRDRD------------------------------------------------------------------IPELAQLQSEILDAIWPHLKTGGTLVYasVLPEENSLQIKAFLQRT-----ADAELCETGtgKQNL--PGAEEGDGFFYAKLIK----------

Alignment cluster 1 [ RosettaCM constraints ]

IDLabel

.2.4.6.8.10.12.14.16.18.20.22.24.26.28.30.32.34.36.38.40.42.44.46.48.50.52.54.56.58.60.62.64.66.68.70.72.74.76.78.80.82.84.86.88.90.92.94.96.98.100.102.104.106.108.110.112.114.116.118.120.122.124.126.128.130.132.134.136.138.140.142.144.146.148.150.152.154.156.158.160.162.164.166.168.170.172.174.176.178.180.182.184.186.188.190.192.194.196.198.200.202.204.206.208.210.212.214.216.218.220.222.224.226.228.230.232.234.236.238.240.242.244.246.248.250.252.254.256.258.260.262.264.266.268.270.272.274.276.278.280.282.284.286.288.290.292.294.296.298.300.302.304.306.308.

110858

21m6yA_201

31m6yA_101

41m6yA_301

53tkaA_102

61wg8A_302

73tkaA_202

81wg8A_103

93tkaA_303

104pooA_304

111wg8A_203

123eeyA_305

133lbyA_306

141sqgA_310

>10858
MLNNQQIHQSVLINEVIHNLNINPCGNYLDLTAGFAGHSQKILEKLTTGTLTINDVDKESINFCQKLFFKNNNVVIIHDNFANFPVHLKQLSITKFDGILMDLGVSSHQLNQPNRGFSFKNDGPIDMRMDQSNQKNTALTVLKNLTEQKLSLILKKYGDIKHPKPIAIGLKKAVQTEKNLTTTQLAKVVKECATGFEKYQSRNYLAKVFQAIRIYLNDEITNLKTALTFIPNLLKNNSRFLVIVFHSIEEKIVRNFIAKLTSFIQPEALPIKLTPAYQLITKKPILPSQKELELNPRSRSAKLFVIQKN
>5wp4A_104 weight: 0.6290 score: 128.2 eval: 0.0013 prob: n/a identity: 0.0971 startpos: 263
----------ETTKEFVEKMNLKPGQKVLDVGCGIGGGDFYMAEKF-DVHVVGIDLSVNMISFALERAilSCSVEFEVADCTTKHY-----PDNSFDVIYSRDTIL--HIQDKPALFR-kPGGKVLISDYCRS----------kTPSAEFSEYIKQryDLHDVQAYGQMLKDAG--iAEDRTDQFMQVLKRELD--------RVEKEKEKFISDFSKEDYDDIVGGWKSKLERCAseQKWGLFIANK--------------------------------------------------------------
>2fk8A_307 weight: 0.2325 score: 4.41 eval: n/a prob: n/a identity: 0.0550 startpos: 30
PELTLEEAQYAKVDLNLDKLDLKPGMTLLDIGCGWGTTMRRAVERFD-VNVIGLTLSKNQHARCEQVLASirSRQVLLQGWEDFA--------EPVDRIVSIE-------------------------------------AFEHFGHENYDDFFKRCfyhfETARFIKFIVTEipGGRLPSTEMMVEHGEKA---GFTVPEPlhYIKTLRIWGDTLQsvYNRYMKYLRGCEHYFTDEmdCSLVTYLKPGAAA---------------------------------------------------------
>4ineA_105 weight: 0.0243 score: 127.8 eval: 0.0013 prob: n/a identity: 0.0874 startpos: 204
-------GYDENLKIIKRFGDFKPGQTMLDIGVGIGGGARQVADEF-GVHVHGIDLSSNMLAIALERLhkDSRVKYSITDALVYQFE-----DNSFDYVFSRDCIQ--HIPDTEKLFS-kPGGKVLITMYGKG-----------eQSDKFKTYVAQryFLKNLKEIADIANKTGF-qTENMTPRFKEILLEERG---------HLEQNEAEFMSKfqRERDSLISGWTDKLGYIEKDNHNWNFFLAQ--------------------------------------------------------------
>3ujcA_106 weight: 0.0207 score: 127.4 eval: 0.0013 prob: n/a identity: 0.0809 startpos: 34
----------EATKKILSDIELNENSKVLDIGSGLGGGCMYINEKY-GAHTHGIDICSNIVNMANERVSGNNKIIFEANDILTKEF-----PENNFDLIYSRDAILALSLENKN-yKWLKPTGTLLITDYCATEKE--------NWDDEFKEYVKQryTLITVEEYADILTACN--vSKDLSDYWNQLLEVEHKY--------LHENKEEFLKLFSEKKFISLDDGWSRKIKDSKRKMQRWGYFKATKN------------------------------------------------------------
>4ineB_107 weight: 0.0189 score: 126.6 eval: 0.0014 prob: n/a identity: 0.0809 startpos: 201
-------GYDENLKIIKRFGDFKPGQTMLDIGVGIGGGARQVADEF-GVHVHGIDLSSNMLAIALERLhkDSRVKYSITDALVYQFE-----DNSFDYVFSRDCIQ--HIPDTE-yKALKPGGKVLITMYGKG-----------eQSDKFKTYVAQryFLKNLKEIADIANKTGF-qTENMTPRFKEILLEERG---------HLEQNEAEFMSKfqRERDSLISGWTDKLGYIEKDNHNWNFFLAQK-------------------------------------------------------------
>4kriC_108 weight: 0.0180 score: 126.6 eval: 0.0014 prob: n/a identity: 0.0647 startpos: 200
-------GWNQNLAILKRFGPMKTGQRMLDIGVGIGGGARQAASEF-GLQVHGVDLSTNMLAVALERVhkDARVTYAVCDACEYEFE-----PNSFDYVFSRDCIQ--HIKDTD-yRALKPGGKVLITMYGVG-----------tLSESFKEYVSQryYLKNLEQIEEIAKKTGfiEVENMTPRFKEILLEERE---------RIEQDKETFLAKfqNAYDGLVSGWKSKLQYIADDNHNWNFFAAVK-------------------------------------------------------------
>4iv0A_109 weight: 0.0175 score: 126.1 eval: 0.0014 prob: n/a identity: 0.0777 startpos: 40
------------TTKILSDIQLDANSKVLDIGSGLGGGCKYINEKY-GAHVHGVDICEKMVTIAKLRNQDKAKIEFEAKDILKKD-----FPESTFDMIYSRDSILHLSYADKK-yKWLKPNGILLITDYCAD-----------nWDEEFKAYIKKryTLMPIQEYGDLIKSCKfvEAKDISDYWLELLQLELSK--------LEEKKEEFLKVYSIKEYNSLKDGWTRKIKDTKrlQKWGYFKAQKMI------------------------------------------------------------
>3ujdA_110 weight: 0.0172 score: 126.1 eval: 0.0014 prob: n/a identity: 0.0809 startpos: 33
----------EATKKILSDIELNENSKVLDIGSGLGGGCMYINEKY-GAHTHGIDICSNIVNMANERVSGNNKIIFEANDILTKEF-----PENNFDLIYSRDAILHLSLENKN-yKWLKPTGTLLITDYCATEKE--------NWDDEFKEYVKQryTLITVEEYADILTACN--vSKDLSDYWNQLLEVEHKY--------LHENKEEFLKLFSEKKFISLDDGWSRKIKDSKRKMQRWGYFKATKN------------------------------------------------------------
>4iv8A_308 weight: 0.0111 score: 4.36 eval: n/a prob: n/a identity: 0.0939 startpos: 10
GEDYISSGGIVATTKILSDIYLEPNSKVLDIGSGLGGGCKYINEKYD-AHVYGVDICEKMIAIAKLRNKDKSKVEFEAMD-------ILKKDFptFDMIYSRDA-------------------------------------ILHLPYADKKKLFEKCykIENWDE---EFKAYINKRKYtpIQDYGDLIKSC-NFQNVQAKDIswLELLQMELNKLEeeYNSLKDGWTRKIKDTKRhqKWGYFKAQKMV------------------------------------------------------------
>3hemA_309 weight: 0.0108 score: 4.35 eval: n/a prob: n/a identity: 0.0809 startpos: 38
PDMTLEEAQYAKRKLALDKLNLEPGMTLLDIGCGWGSTMRHAVAEYD-VNVIGLTLSENQYAHDKAMFDEvrRKEVRIQGWEEFD--------EPVDRIVSLGAFEHFADGAGDAGflTPDDGRmiTIPdlGLTSpfIKFILTepRISQVDYYSSNAgiGANYVPTLNAWADALQAH------------KDEAIALKGQ------------------ETCDIYMHYLRGCSDLFRDKydVCQFTLVK--------------------------------------------------------------

Alignment cluster 2 [ RosettaCM constraints ]

IDLabel

110858

25wp4A_104

32fk8A_307

44ineA_105

53ujcA_106

64ineB_107

74kriC_108

84iv0A_109

93ujdA_110

104iv8A_308

113hemA_309

SSGCID - MygeA.01545.a Ribosomal RNA small subunit methyltransferase H MG_222 Domain 1 Parse 1 Confidence: 0.93 Download Results Archive Download Domain Models

SSGCID - MygeA.01545.a Ribosomal RNA small subunit methyltransferase H MG_222 Domain 1 Parse 1 Confidence: 0.93