SSGCID - MygeA.19059.a Probable transcriptional regulatory protein MG332 MG

SSGCID - MygeA.19059.a Probable transcriptional regulatory protein MG332 MG_332 Domain 1 Parse 1 Confidence: 0.75

Job ID	Status	Method	Username	Target	Length	Date (PST)	Expiration Date (PST)
10511	Complete	Structure prediction	ssgcid	SSGCID - MygeA.19059.a Pr...	239	4 Nov 2019	-

Domain ID	Domain	Parse	Confidence	Modeling Method	Model Span	Length	Date (PST)
10881	1	1	0.75	comparative modeling	1-239	239	10 Nov 2019

             1   .   10    .   20    .   30    .   40    .   50    .   60    .   70    .   80    .   90    .  100    .  110    .  120    .  130    .  140    .  150    .  160    .  170    .  180    .  190    .  200    .  210    .  220    .  230    .    
   sequence: MPRKHLIANQTNKKQQTSAKQLQKLAKRIASAVKKGGTNIQSNPHLKVAVDLALAKGLSMDSIKRNIHGSEKDTTKISEFCYEIFGPNGVGIIVFGLTDNPNRLLSSLNGYLAKLKGQLAKPNSVKINFQEEGIIFVNKNNYLKDDLIELLILDNINLIDVDYDEECFEISLHSNSYFHAKELLKKNNFSIVDSEIKLVPLLTVDLDRNQQTLLSRFLNACEEDDDIQFVVHNANPWEE
 deepconcnf: -----HHHHHHHHHHHHHHHHHHHHHHHHHHHHH---------HHHHHHHHHHHH----HHHHHHHHH---------EEEEEEEE---HHHHHHHHH-------HHHHHHHHHH---------EEEEEE---EEEEEE-----HHHHHHHHHHHH----EEEEE--EEEEEE----HHHHHHHHHH----EEEEEEEEEE-------HHHHHHHHHHHHHHH---HHHHHHHH------
    psipred: -----HHHHHHHHHHHHHHHHHHHHHHHHHHHHHH--------HHHHHHHHHHHH----HHHHHHHHH--------EEEEEEEEE----EEEEEEE--------HHHHHHHH-----------EEEEEE---EEEEE------HHHHHHHHHHH------------EEEEEE-HHHHHHHHHHHHH-----EEEEEEE----EEE--HHHHHHHHHHHHHHHHH--HHHHH--------
    spider3: -----HHHHHHHHHHHHHHHHHHHHHHHHHHHHHH----HHH-HHHHHHHHHHHH----HHHHHHHHHH--------EEEEEE------EEEEEEE--------HHHHHHHHHH---------HHHHHH--EEEEEE------HHHHHHHHHH--------------EEEEE-HHHHHHHHHHHHH----EEEEEEEEE---EEE--HHHHHHHHHHHHHHHH---HHHEE--------

View

GREMLIN (Neff(80%)/√Len: 130.3)

Alignment

>10881
MPRKHLIANQTNKKQQTSAKQLQKLAKRIASAVKKGGTNIQSNPHLKVAVDLALAKGLSMDSIKRNIHGSEKDTTKISEFCYEIFGPNGVGIIVFGLTDNPNRLLSSLNGYLAKLKGQLAKPNSVKINFQEEGIIFVNKNNYLKDDLIELLILDNINLIDVDYDEECFEISLHSNSYFHAKELLKKNNFSIVDSEIKLVPLLTVDLDRNQQTLLSRFLNACEEDDDIQFVVHNANPWEE
>4f3qA_w086 weight: 0.1506 score: 0.90636 eval: n/a prob: n/a identity: 0.2552 startpos: 1
KWANIKHAKARQD--AKRGKVFTKLIREITVAARLGGEDIDSNPRLRAVVDKAFAANMPKDTITRAIKRGAD---NLVEVRYEGYGPSGVAVMVDCLTDNKNRTVAEVRHAFSKCDGNLGTEGSVAYLFKQRGLITFPP-NSDEEKIMEIAL--EVGAEDVTTDDGSIDVTTLPEDFEKIRNAMKAADLNPSHAEVTVLASTEVGLDKDSAEQMLRLTEMLEDLDDVQNVYSNADY---
>1lfpA_w087 weight: 0.1480 score: 0.91050 eval: n/a prob: n/a identity: 0.2762 startpos: 6
IKHKKAKVDAQR------GKLFSKLIREIIVATRLGGPNPEFNPRLRTAIEQAKKANMPWENIERAIKKGAGELEQFEEVIYEGYAPGGVAVMVLATTDNRNRTTSEVRHVFTKHGGNLGASGCVSYLFERKGYIEVPAKEVSEEELLEKAI--EVGAEDVQPGEEVHIIYTVPEELYEVKENLEKLGVPIEKAQITWKPISTVQIDEETAQKVIKLLNALEELDDVQQVIANFEI---
>4f3qA_201 weight: 0.1329 score: 617.64 eval: 1e-45 prob: 100 identity: 0.2594 startpos: 1
-----KWANIKHAkdAKRGKVFTKLIREITVAARLGGEDIDSNPRLRAVVDKAFAANMPKDTITRAIKRGAD---NLVEVRYEGYGPSGVAVMVDCLTDNKNRTVAEVRHAFSKCDGNLGTEGSVAYLFKQRGLITFPPNS-DEEKIMEIAL--EVGAEDVTTndGSIDVTTLPEDFEKIRNAMKAADLNPSHAEVTVLASTEVG-LddSAEQMLRLTEMLEDLDDVQNVYSNADYPEE
>1konA_w068 weight: 0.1313 score: 0.73400 eval: n/a prob: n/a identity: 0.2176 startpos: 2
HSKWANTRHRKAAQDAKRGKIFTKIIRELVT---A--AKLDANPRLRAAVDKALSNNMTRDTLNRAIA--RG--ANMETIIYEGYGPGGTAIMIECLSDNRNRTVAEVRHAFSKCGGNLGTDGSVAYLFSKKGVISFEK--GDEDTIMEAAL--EAGAEDVVTDDGAIDVYTAWEEMGKVRDALEAAGLKADSAEVSMIPSTKADMDAETAPKLMRLIDMLEDCDDVQEVYHNGEI---
>1lfpA_101 weight: 0.1308 score: 246.2 eval: 7.5e-09 prob: n/a identity: 0.2887 startpos: 1
----SHWAQIKHKKAkqRGKLFSKLIREIIVATRLGGPNPEFNPRLRTAIEQAKKANMPWENIERAIKKGalEGEQFEEVIYEGYAPGGVAVMVLATTDNRNRTTSEVRHVFTKHGGNLGASGCVSYLFERKGYIEVPAKEVSEEELLEKAIEV--GAEDVQPGEEVHIIYTVPEELYEVKENLEKLGVPIEKAQITWKPISTVQIneETAQKVIKLLNALEELDDVQQVIANFEIPEE
>1lfpA_301 weight: 0.1299 score: 34.8 eval: n/a prob: n/a identity: 0.2929 startpos: 1
----SHWAQIKHKkdAQRGKLFSKLIREIIVATRLGGPNPEFNPRLRTAIEQAKKANMPWENIERAIKKgeLEGEQFEEVIYEGYAPGGVAVMVLATTDNRNRTTSEVRHVFTKHGGNLGASGCVSYLFERKGYIEVPAKEVSEEELLEKAIEVG--AEDVQPGEEVHIIYTVPEELYEVKENLEKLGVPIEKAQITWKPISTVQIneETAQKVIKLLNALEELDDVQQVIANFEIPEE
>1mw7A_w060 weight: 0.1129 score: 0.66951 eval: n/a prob: n/a identity: 0.2385 startpos: 1
-------------------KVFPKLAKAITLAAKDGGSEPDTNAKLRTAILNAKAQNMPKDNIDAAIKRASSKEGNLSEITYEGKANFGVLIIMECMTDNPTRTIANLKSYFNKTGASIVPNGSLEFMFNRKSVFECLKLKLSLEDLEFALI--DYGLEELEEVEDKIIIRGDYNSFKLLNEGFESLKLPILKASLQRIATTPIELNDEQMELTEKLLDRIEDDDDVVALYTNIE----
>4f3qA_302 weight: 0.0062 score: 32.91 eval: n/a prob: n/a identity: 0.2636 startpos: 1
--KWANIKHAKARQDAKRGKVFTKLIREITVAARLGGEDIDSNPRLRAVVDKAFAANMPKDTITRAIKRGADN---LVEVRYEGYGPSGVAVMVDCLTDNKNRTVAEVRHAFSKCDGNLGTEGSVAYLFKQRGLITFPPN-SDEEKIMEIALEVG--AEDVtnDDGSIDVTTLPEDFEKIRNAMKAADLNPSHAEVTVLASTEVGLDKDSAEQMLRLTEMLEDLDDVQNVYSNADYPEE
>4f3qA_102 weight: 0.0061 score: 241.2 eval: 1.1e-08 prob: n/a identity: 0.2594 startpos: 3
----ANIKHAKARQDAKRGKVFTKLIREITVAARLGGEDIDSNPRLRAVVDKAFAANMPKDTITRAIKRGA---DNLVEVRYEGYGPSGVAVMVDCLTDNKNRTVAEVRHAFSKCDGNLGTEGSVAYLFKQRGLITFPPN-SDEEKIMEIALEVG--AEDVTTndGSIDVTTLPEDFEKIRNAMKAADLNPSHAEVTVLASTEVGLDKDSAEQMLRLTEMLEDLDDVQNVYSNADYPEE
>1lfpA_202 weight: 0.0059 score: 329.37 eval: 1e-45 prob: 100 identity: 0.2929 startpos: 5
-QIKHKKAKVD----AQRGKLFSKLIREIIVATRLGGPNPEFNPRLRTAIEQAKKANMPWENIERAIKKgeLEGEQFEEVIYEGYAPGGVAVMVLATTDNRNRTTSEVRHVFTKHGGNLGASGCVSYLFERKGYIEVPAKEVSEEELLEKAI--EVGAEDVQPGEEVHIIYTVPEELYEVKENLEKLGVPIEKAQITWKPISTVQINdeTAQKVIKLLNALEELDDVQQVIANFEIPEE
>1konA_103 weight: 0.0055 score: 231.5 eval: 2.5e-08 prob: n/a identity: 0.2385 startpos: 1
--GHSKWANTRHRKaaKRGKIFTKIIRELVTAAKLD-----ANPRLRAAVDKALSNNMTRDTLNRAIARG----ANMETIIYEGYGPGGTAIMIECLSDNRNRTVAEVRHAFSKCGGNLGTDGSVAYLFSKKGVISFEK--GDEDTIMEAALEAG--AEDVVTydGAIDVYTAWEEMGKVRDALEAAGLKADSAEVSMIPSTKADMDAETAPKLMRLIDMLEDCDDVQEVYHNGEISDE
>1konA_203 weight: 0.0054 score: 622.32 eval: 1e-45 prob: 100 identity: 0.2385 startpos: 1
--GHSKWANTRHRkdAKRGKIFTKIIRELVTAAKL-----DANPRLRAAVDKALSNNMTRDTLNRAIARG----ANMETIIYEGYGPGGTAIMIECLSDNRNRTVAEVRHAFSKCGGNLGTDGSVAYLFSKKGVISFEKG--DEDTIMEAAL--EAGAEDVVTydGAIDVYTAWEEMGKVRDALEAAGLKADSAEVSMIPSTKADMDAETAPKLMRLIDMLEDCDDVQEVYHNGEISDE
>1konA_303 weight: 0.0053 score: 31.62 eval: n/a prob: n/a identity: 0.2427 startpos: 1
--GHSKWANTRHRkdAKRGKIFTKIIRELVTAAKL-----DANPRLRAAVDKALSNNMTRDTLNRAIAR----GANMETIIYEGYGPGGTAIMIECLSDNRNRTVAEVRHAFSKCGGNLGTDGSVAYLFSKKGVISFEKGD--EDTIMEAALEAG--AEDVVtdDGAIDVYTAWEEMGKVRDALEAAGLKADSAEVSMIPSTKADMDAETAPKLMRLIDMLEDCDDVQEVYHNGEISDE
>1mw7A_105 weight: 0.0050 score: 225.3 eval: 4.2e-08 prob: n/a identity: 0.2427 startpos: 1
-------------------KVFPKLAKAITLAAKDGGSEPDTNAKLRTAILNAKAQNMPKDNIDAAIKRASSKEGNLSEITYEGKANFGVLIIMECMTDNPTRTIANLKSYFNKtgASIVPNGSLEFMFNRKSVFECLKNEvsLEDLEFALID--YGLEELEEVEDKIIIRGDYNSFKLLNEGFESLKLPILKASLQRIATTPIELNDEQMELTEKLLDRIEDDDDVVALYTNIE----
>5ekzA_104 weight: 0.0049 score: 225.4 eval: 4.2e-08 prob: n/a identity: 0.1883 startpos: 1
-----------------RSRIFSKLTLSIRLAVKEGGPNPENNSSLANILELCRSKNMPKSTIESALKTEK---NKGIYLLYEGRGPGGSSLLIEALSNSGPKCHLDIKYILNKNGGMMAE--GARHFFDKKGVVVVGVeaVNLERALELAIEA--GAEDVKEAenLFKFICDASSLHQVRKKLDSLGLCPVSCSMEFIPHSKVQLAEPELEQAAHLIQALNNYEDVIHVYDNIE----
>5ekzA_205 weight: 0.0049 score: 527.07 eval: 1e-45 prob: 100 identity: 0.1925 startpos: 1
-----------------RSRIFSKLTLSIRLAVKEGGPNPENNSSLANILELCRSKNMPKSTIESALKTE-KN--KGIYLLYEGRGPGGSSLLIEALSNSGPKCHLDIKYILNKNGGMMAE--GARHFFDKKGVVVVGVEdvNLERALELAI--EAGAEDVKEAenLFKFICDASSLHQVRKKLDSLGLCPVSCSMEFIPHSKVQLAEPELEQAAHLIQALNNYEDVIHVYDNIE----
>1mw7A_204 weight: 0.0048 score: 610.57 eval: 1e-45 prob: 100 identity: 0.2427 startpos: 1
-------------------KVFPKLAKAITLAAKDGGSEPDTNAKLRTAILNAKAQNMPKDNIDAAIKRASSKEGNLSEITYEGKANFGVLIIMECMTDNPTRTIANLKSYFNKtgASIVPNGSLEFMFNRKSVFECLKNelSLEDLEFALI--DYGLEELEEVEDKIIIRGDYNSFKLLNEGFESLKLPILKASLQRIATTPIELNDEQMELTEKLLDRIEDDDDVVALYTNIE----
>1mw7A_304 weight: 0.0048 score: 30.7 eval: n/a prob: n/a identity: 0.2427 startpos: 1
-------------------KVFPKLAKAITLAAKDGGSEPDTNAKLRTAILNAKAQNMPKDNIDAAIKRASSKEGNLSEITYEGKANFGVLIIMECMTDNPTRTIANLKSYFNKtgASIVPNGSLEFMFNRKSVFECLKNelSLEDLEFALIDYG--LEELEEVEDKIIIRGDYNSFKLLNEGFESLKLPILKASLQRIATTPIELNDEQMELTEKLLDRIEDDDDVVALYTNIE----
>5ekzA_305 weight: 0.0048 score: 28.68 eval: n/a prob: n/a identity: 0.1841 startpos: 1
-----------------RSRIFSKLTLSIRLAVKEGGPNPENNSSLANILELCRSKNMPKSTIESALKTE---KNKGIYLLYEGRGPGGSSLLIEALSNSGPKCHLDIKYILNKNGGMMAE--GARHFFDKKGVVVVGvkAVNLERALELAIEAG--AEDVKeeKNLFKFICDASSLHQVRKKLDSLGLCPVSCSMEFIPHSKVQLAEPELEQAAHLIQALNNYEDVIHVYDNIE----

Alignment cluster 1 [ RosettaCM constraints ]

IDLabel

.2.4.6.8.10.12.14.16.18.20.22.24.26.28.30.32.34.36.38.40.42.44.46.48.50.52.54.56.58.60.62.64.66.68.70.72.74.76.78.80.82.84.86.88.90.92.94.96.98.100.102.104.106.108.110.112.114.116.118.120.122.124.126.128.130.132.134.136.138.140.142.144.146.148.150.152.154.156.158.160.162.164.166.168.170.172.174.176.178.180.182.184.186.188.190.192.194.196.198.200.202.204.206.208.210.212.214.216.218.220.222.224.226.228.230.232.234.236.238.

110881

24f3qA_w086

31lfpA_w087

44f3qA_201

51konA_w068

61lfpA_101

71lfpA_301

81mw7A_w060

94f3qA_302

104f3qA_102

111lfpA_202

121konA_103

131konA_203

141konA_303

151mw7A_105

165ekzA_104

175ekzA_205

181mw7A_204

191mw7A_304

205ekzA_305

>10881
MPRKHLIANQTNKKQQTSAKQLQKLAKRIASAVKKGGTNIQSNPHLKVAVDLALAKGLSMDSIKRNIHGSEKDTTKISEFCYEIFGPNGVGIIVFGLTDNPNRLLSSLNGYLAKLKGQLAKPNSVKINFQEEGIIFVNKNNYLKDDLIELLILDNINLIDVDYDEECFEISLHSNSYFHAKELLKKNNFSIVDSEIKLVPLLTVDLDRNQQTLLSRFLNACEEDDDIQFVVHNANPWEE
>6hr7A_w001 weight: 0.5132 score: 0.00880 eval: n/a prob: n/a identity: 0.0795 startpos: 3
ILEKLLKKEIKPYQLDDLV-GEKEAIELRRKYI---EKISQVETKHIGHYTIDEKEAMKKNIM-----I---GAVQIPLGFAPLKIYANGEFYVPLAT--TEALVASVNRGCS-I---VTKCGGVTVRVIMTRAPVIKTSVIDAVKLKEWIKFQRIDINPILIVGRYVYPRFVTIATEKACNFIEEENIHTVALSGNACSIIAEFLKEEEIYLFNAHYANIIGALFLAVEGSLGIT---
>6hr8A_w001 weight: 0.4868 score: 0.00798 eval: n/a prob: n/a identity: 0.0795 startpos: 4
ILEKLLKKEIKPYQLDDLV-GEKEAIELRR----KYIEKISQVETKHIGYTIDEKEAMKKNIM-----I---GAVQIPLGFAPLKIYANGEFYVPLAT--TEALVASVNRGCSIV----TKCGGVTVRVIMTRAPVIKTSVIDAVKLKEWIKFQRIDINPILIVGRYVYPRFVTIATEKACNFIEEENIHTVALSGNACSIIAEVLKEEEIMGFNAHYANIIGALFLAGSLGITFS---

Alignment cluster 2 [ RosettaCM constraints ]

IDLabel

110881

26hr7A_w001

36hr8A_w001

SSGCID - MygeA.19059.a Probable transcriptional regulatory protein MG332 MG_332 Domain 1 Parse 1 Confidence: 0.75 Download Results Archive Download Domain Models

SSGCID - MygeA.19059.a Probable transcriptional regulatory protein MG332 MG_332 Domain 1 Parse 1 Confidence: 0.75