SSGCID - MygeA.20141.a PTS system fructose-specific EIIABC component MG

SSGCID - MygeA.20141.a PTS system fructose-specific EIIABC component MG_062 Domain 1 Parse 1 Confidence: 0.52

Job ID	Status	Method	Username	Target	Length	Date (PST)	Expiration Date (PST)
10512	Domain complete	Structure prediction	ssgcid	SSGCID - MygeA.20141.a PT...	680	4 Nov 2019	-

Domain ID	Domain	Parse	Confidence	Modeling Method	Model Span	Length	Date (PST)
10882	1	1	0.52	comparative modeling	1-275	275	10 Nov 2019

             1   .   10    .   20    .   30    .   40    .   50    .   60    .   70    .   80    .   90    .  100    .  110    .  120    .  130    .  140    .  150    .  160    .  170    .  180    .  190    .  200    .  210    .  220    .  230    .  240    .  250    .  260    .  270    .
   sequence: MFKNLLRPSLFFNWSQKTFKNKFSFLKQAANALQKQAVINDNNVAFEALKKREEEITTGIITSLALPHLQSQSVIEPFVAVFKVKNLDWQSLDQKPVKLIFLIGVLVDKTNLHLDFISNFSKLMLNETFASKVLNVTSYNGLIKLIDLFNQQKVQDQPAVETKKEYDFVAVTACPTGIAHTFMAKEALEAFAKKHNLYVKVETQGTDGIQNQLTSDDINNAKGVILACDRLIDFSRFYANKNVIEVSTTKAIKKPDEVYELIKNQKGKQLANSAK
    psipred: -HHHH--HHHHHH--------HHHHHHHHHHHHHHH-----HHHHHHHHHHHHH---------EE------HHH----EEEEE---------------EEEEEE------HHHHHHHHHHHHHH--HHHHHHHHH---HHHHHHHHHHHH----------------EEEEEE----HHHHHHHHHHHHHHHHHH----EEEE------------HHHHHH--EEEEE------HHHH----EEEE--HHHH---HHHHHHHHHH-----------
    spider3: -HHHH--HHHEEE--------HHHHHHHHHHHHHH------HHHHHHHHHHHHHH----------------------EEEEEEE------------EEEEEEEEE-----HHHHHHHHHHHHHH--HHHHHHHHH---HHHHHHHHHHHHHH--------------EEEEEE-----HHHHHHHHHHHHHHHHH----EEEEE-----------HHHHHH--EEEEEE-----HHHH-----EEEE-HHHHHH-HHHHHHHHHH-----------
 deepconcnf: -HHHH----EEEEEE------HHHHHHHHHHHHHHH-----HHHHHHHHHHHHH---------EEEEEEE-------EEEEEEE--EE---------EEEEEEEE----HHHHHHHHHHHHHH---HHHHHHHH----HHHHHHHHHH-------------------EEEEE-----HHHHHHHHHHHHHHHHH---EEEEEE-----------HHHHH---EEEEE---------------EEEEEHHHHHH-HHHHHHHHH------------

View

GREMLIN (Neff(80%)/√Len: 69.7)

Alignment

>10882
MFKNLLRPSLFFNWSQKTFKNKFSFLKQAANALQKQAVINDNNVAFEALKKREEEITTGIITSLALPHLQSQSVIEPFVAVFKVKNLDWQSLDQKPVKLIFLIGVLVDKTNLHLDFISNFSKLMLNETFASKVLNVTSYNGLIKLIDLFNQQKVQDQPAVETKKEYDFVAVTACPTGIAHTFMAKEALEAFAKKHNLYVKVETQGTDGIQNQLTSDDINNAKGVILACDRLIDFSRFYANKNVIEVSTTKAIKKPDEVYELIKNQKGKQLANSAK
>3urrA_301 weight: 0.2525 score: 13.22 eval: n/a prob: n/a identity: 0.1018 startpos: 4
RLAKILPLENV-VIGLS-VTSKKRVFEQAGLIFENQNGI-ARSTVTDNLFARERLGSTGLGEGVAIPHGRIKGLKHPLAAFVRLapIPFEAPDGQPVSLLIFLLVPEQATQAHLEILSEIAQLLSDRDTRERLHTEPDRDELHRLLTQWQP----------------------------------------------------------------------------------------------------------------------------
>3urrA_101 weight: 0.2203 score: 149.3 eval: 4e-05 prob: n/a identity: 0.1018 startpos: 4
RLAKILPLENVVIGLS--VTSKKRVFEQAGLIFENQNGI-ARSTVTDNLFARERLGSTGLGEGVAIPHGRIKGLKHPLAAFVRLapIPFEAPDGQPVSLLIFLLVPEQATQAHLEILSEIAQLLSDRDTRERLHTEPDRDELHRLLTQW------------------------------------------------------------------------------------------------------------------------------
>2a0jA_201 weight: 0.2162 score: 219.26 eval: 7e-31 prob: 99.97 identity: 0.1127 startpos: 2
LIGEILPLSHI-VLDME-VGSKKRLFEEAGLLLERE-SSLSHADVFECLFAREKLGSTGLGQGVAIPHGRHAGVKQATGAFIRTrpVGFDAPDGKPVSLIFILLVPENATGEHLEVLSKLAGKFSQKSIRESLMTVSSAEEVRAILT--------------------------------------------------------------------------------------------------------------------------------
>4ky9P_w000 weight: 0.1108 score: 0.00211 eval: n/a prob: n/a identity: 0.0618 startpos: 54
ELRRVFTKGTV-LLDLQ-ETSLAGVANQLLDRFIFEDQIRDREELLRALLETQLFCEKIDSEATLVLVGRADFLEQPVLGFVRLQAAELAVELPVPIRFLFVLLGPEAPHIDYTQLGRAAATLMSERVFRIDAYMAQSRGELLHSLEGF----------------LDCSLVLPPTDAPSEQALLSLVPVQRELLRRRYQ----------------------------------------------------------------------------
>4ky9A_w000 weight: 0.0937 score: 0.00166 eval: n/a prob: n/a identity: 0.0618 startpos: 53
ELRRVFTKGTV-LLDLQ-ETSLAGVANQLLDRFIFEDQIRDREELLRALLLETQLFCEEDSEATLVLVGRADFLEQPVLGFVRLQEALEAVELPVPIRFLFVLLGPEAPHIDYTQLGRAAATLMSERVFRIDAYMAQSRGELLHSLEGF-----------------LDCSLVLPPTDAPSEQALLSLVPVQ-------------------RELLRRRYQSS------------------------------------------------------
>4gqxA_302 weight: 0.0105 score: 13.09 eval: n/a prob: n/a identity: 0.1018 startpos: 3
RLAKILPLENV-VIDLS-VTSKKRVFEQAGLIFENQNGI-ARSTVTDNLFARERLGSTGLGEGVAIPHGRIKGLKHPLAAFVRlePIPFEAPDGQPVSLLIFLLVPEQATQAHLEILSEIAQLLSDRDTRERLHTEPDRDELHRLLTQWQP----------------------------------------------------------------------------------------------------------------------------
>1a6jA_102 weight: 0.0096 score: 146.7 eval: 4.8e-05 prob: n/a identity: 0.1200 startpos: 2
QLSSVLNRECTRSRVH--CQSKKRALEIISELAAKQLSL-PPQVVFEAILTREKMGSTGIGNGIAIPHGKLedTLRAVGVFVQLepIAFDAIDNQPVDLLFALLVPADQTKTHLHTLSLVAKRLADKTICRRLRAAQSDEELYQIITDT------------------------------------------------------------------------------------------------------------------------------
>1a6jA_304 weight: 0.0089 score: 12.29 eval: n/a prob: n/a identity: 0.1200 startpos: 2
QLSSVLNRECT-RSRVH-CQSKKRALEIISELAAKQLSL-PPQVVFEAILTREKMGSTGIGNGIAIPHGKLEetLRAVGVFVQLepIAFDAIDNQPVDLLFALLVPADQTKTHLHTLSLVAKRLADKTICRRLRAAQSDEELYQIITDTE-----------------------------------------------------------------------------------------------------------------------------
>2a0jA_303 weight: 0.0081 score: 12.78 eval: n/a prob: n/a identity: 0.1127 startpos: 2
LIGEILPLSHI-VLDME-VGSKKRLFEEAGLLLERESSL-SHADVFECLFAREKLGSTGLGQGVAIPHGRHAGVKQATGAFIRTrpVGFDAPDGKPVSLIFILLVPENATGEHLEVLSKLAGKFSQKSIRESLMTVSSAEEVRAILT--------------------------------------------------------------------------------------------------------------------------------
>4gqxA_103 weight: 0.0079 score: 145.3 eval: 5.4e-05 prob: n/a identity: 0.1018 startpos: 3
RLAKILPLENVVIDLS--VTSKKRVFEQAGLIFENQNGI-ARSTVTDNLFARERLGSTGLGEGVAIPHGRIKGLKHPLAAFVRLapIPFEAPDGQPVSLLIFLLVPEQATQAHLEILSEIAQLLSDRDTRERLHTEPDRDELHRLLTQW------------------------------------------------------------------------------------------------------------------------------
>1a6jA_204 weight: 0.0068 score: 305.55 eval: 1e-45 prob: 100 identity: 0.1164 startpos: 2
QLSSVLNRECT-RSRVH-CQSKKRALEIISELAAK-QLSLPPQVVFEAILTREKMGSTGIGNGIAIPHGKLEetLRAVGVFVQltPIAFDAIDNQPVDLLFALLVPADQTKTHLHTLSLVAKRLADKTICRRLRAAQSDEELYQIITDTE-----------------------------------------------------------------------------------------------------------------------------
>4gqxA_203 weight: 0.0068 score: 306.19 eval: 1e-45 prob: 100 identity: 0.0945 startpos: 3
RLAKILPLENV-VIDLS-VTSKKRVFEQAGLIFE-NQNGIARSTVTDNLFARERLGSTGLGEGVAIPHGRIKGLKHPLAAFVRlePIPFEAPDGQPVSLLIFLLVPEQATQAHLEILSEIAQLLSDRDTRERLHTEPDRDELHRLLTQWQP----------------------------------------------------------------------------------------------------------------------------
>2fewA_308 weight: 0.0065 score: 10.43 eval: n/a prob: n/a identity: 0.0873 startpos: 1
--LFKLGAENI-FLGRK-AATKEEAIRFAGEQLVKGGYVE--PEYVQAMLDREKLTPTYLGESIAVPQGTvdRVLKTGVVFCQYpgVRFGEEEDDIARLVIGIAA---RNNEHIQVITSLTNALDDESVIERLAHTTSVDEVLELLAGR------------------------------------------------------------------------------------------------------------------------------
>1a3aA_307 weight: 0.0064 score: 10.5 eval: n/a prob: n/a identity: 0.0909 startpos: 1
--LFKLGAENI-FLGRK-AATKEEAIRFAGEQLVKGGYVEPE--YVQAMLDREKLTPTYLGESIAVPHGTVEavLKTGVVFCQYpgVRFGEEEDDIARLVIGIAARN---NEHIQVITSLTNALDDESVIERLAHTTSVDEVLELLAGRK-----------------------------------------------------------------------------------------------------------------------------
>2a0jA_104 weight: 0.0063 score: 140.1 eval: 8.2e-05 prob: n/a identity: 0.1127 startpos: 2
LIGEILPLSHIVLDME--VGSKKRLFEEAGLLLERESSL-SHADVFECLFAREKLGSTGLGQGVAIPHGRHAGVKQATGAFIRTrpVGFDAPDGKPVSLIFILLVPENATGEHLEVLSKLAGKFSQKSIRESLMTVSSAEEVRAILT--------------------------------------------------------------------------------------------------------------------------------
>1a3aA_106 weight: 0.0060 score: 131.2 eval: 0.00016 prob: n/a identity: 0.0909 startpos: 1
--LFKLGAENIFLGRK--AATKEEAIRFAGEQLVKGGYVE--PEYVQAMLDREKLTPTYLGESIAVPHGTVEavLKTGVVFCQYpgVRFGEEEDDIARLVIGIAARN---NEHIQVITSLTNALDDESVIERLAHTTSVDEVLELLAGR------------------------------------------------------------------------------------------------------------------------------
>2fewA_107 weight: 0.0058 score: 130.1 eval: 0.00018 prob: n/a identity: 0.0836 startpos: 1
--LFKLGAENIFLGRK--AATKEEAIRFAGEQLVKGGYVE--PEYVQAMLDREKLTPTYLGESIAVPQGTVEavLKTGVVFCQYpgVRFGEEEDDIARLVIGIAARNN---EHIQVITSLTNALDDESVIERLAHTTSVDEVLELLAGR------------------------------------------------------------------------------------------------------------------------------
>3oxpA_105 weight: 0.0058 score: 133.5 eval: 0.00014 prob: n/a identity: 0.1055 startpos: 2
MLKTLLTSDVIQVVSQ--AKDWRDAIAISCQPLIDNGAVE--ARYVEAIYRSHEAIGpvVGPGIAMPHARPegVNRLSLALTVItgVTFNAEGNDPVKLLIVLAATD--SNSHIEAISQLAQLFDTASDVQALLNAKTPQDILSVIARY------------------------------------------------------------------------------------------------------------------------------
>2oq3A_108 weight: 0.0045 score: 129.7 eval: 0.00019 prob: n/a identity: 0.0727 startpos: 2
RLSDYFPESSISVIH--SAKDWQEAIDFSMVSLLDKNY--ISENYIQAIKDSTINNGpiLAPGVAMPHARPegALKTGMSLTLLegVYFPGN-DEPIKLLIGLSAAD--ADSHIGAIQALSELLCEEEILEQLLTASSEKQLADIISRG------------------------------------------------------------------------------------------------------------------------------
>5t6lG_109 weight: 0.0034 score: 129.4 eval: 0.00019 prob: n/a identity: 0.0764 startpos: 3
MQGIHFRRHYVRHLPK--EVSQNDIIKALASPLINDGMV--VSDFADHVITREQNFPTGLpvGVAIPHTDSKYVRQNAISVGILapVNFEDAGGepVPVRVVFMLALGNWFDITNVLWWIKAVIQDEDFMQQLLVM-NDDEIYQSIYTR------------------------------------------------------------------------------------------------------------------------------
>5sy8O_110 weight: 0.0030 score: 128.3 eval: 0.00021 prob: n/a identity: 0.0727 startpos: 1
--GIHFRRHYVRHLPK--EVSQNDIIKALASPLINDGMV--VSDFADHVITREQNFPTGLpvGVAIPHTDSKYVRQNAISVGILapVNFEDAGGepVPVRVVFMLALGNWFDITNVLWWIKAVIQDEDFMQQLLVM-NDDEIYQSIYTR------------------------------------------------------------------------------------------------------------------------------
>3t43A_205 weight: 0.0002 score: 215.67 eval: 2.1e-32 prob: 99.91 identity: 0.0655 startpos: 1
-------------------VSQNDIIKALASPLINDGMVV--SDFADHVITREQNAPTGlpVGVAIPHTDSKYVRQNAISVGILapVNFEDAGGepVRVVFMLALGNW--FDITNVLWWIMDVIQDADFMQQLLVMNDDEIYQSIYTRISEAAGMA-----------------------------------------------------------------------------------------------------------------------

Alignment cluster 1 [ RosettaCM constraints ]

IDLabel

.2.4.6.8.10.12.14.16.18.20.22.24.26.28.30.32.34.36.38.40.42.44.46.48.50.52.54.56.58.60.62.64.66.68.70.72.74.76.78.80.82.84.86.88.90.92.94.96.98.100.102.104.106.108.110.112.114.116.118.120.122.124.126.128.130.132.134.136.138.140.142.144.146.148.150.152.154.156.158.160.162.164.166.168.170.172.174.176.178.180.182.184.186.188.190.192.194.196.198.200.202.204.206.208.210.212.214.216.218.220.222.224.226.228.230.232.234.236.238.240.242.244.246.248.250.252.254.256.258.260.262.264.266.268.270.272.274.

110882

23urrA_301

33urrA_101

42a0jA_201

54ky9P_w000

64ky9A_w000

74gqxA_302

81a6jA_102

91a6jA_304

102a0jA_303

114gqxA_103

121a6jA_204

134gqxA_203

142fewA_308

151a3aA_307

162a0jA_104

171a3aA_106

182fewA_107

193oxpA_105

202oq3A_108

215t6lG_109

225sy8O_110

233t43A_205

>10882
MFKNLLRPSLFFNWSQKTFKNKFSFLKQAANALQKQAVINDNNVAFEALKKREEEITTGIITSLALPHLQSQSVIEPFVAVFKVKNLDWQSLDQKPVKLIFLIGVLVDKTNLHLDFISNFSKLMLNETFASKVLNVTSYNGLIKLIDLFNQQKVQDQPAVETKKEYDFVAVTACPTGIAHTFMAKEALEAFAKKHNLYVKVETQGTDGIQNQLTSDDINNAKGVILACDRLIDFSRFYANKNVIEVSTTKAIKKPDEVYELIKNQKGKQLANSAK
>6e59A_w000 weight: 0.2251 score: 0.00129 eval: n/a prob: n/a identity: 0.0618 startpos: 15
IVVTSVVGNVVVMWIIKRMRTVTNYFLVNLAFAEAS-MA--AFNTVVNFTYAVHN--EWYYGLFYCKFHNFFPIAAVFASYIHPLQPRLSAATKVVIVIWVLALLLAFPQGYYSTTERVVCMIKVYHICVTVLIYPLLVIGYAYTVVGITLRKKSLLSKFGMDEGVTFMFFDRGQKGVDVLLKAIEILSSKKEFQEMRFIIIGKGNVKVITEFVRELYGSVDFVIIPSYFELVALAMCLGAIPIASAVLVDPGELANAILKALELSRSDL-----
>2r48A_202 weight: 0.1718 score: 230.86 eval: 5e-34 prob: 100 identity: 0.1418 startpos: 1
--------------------------------------------------------------------------------------------------------------------------------------------------------------------NAKLLAITSCPNGIAHTYMAAENLQKAADRLGVSIKVETQGGIGVENKLTEEEIREADAIIIAADRSVNKDRFI-GKKLLSVGVQDGIRKPEELIQKALNGDIPVY-----
>2r48A_305 weight: 0.1638 score: 11.42 eval: n/a prob: n/a identity: 0.1418 startpos: 1
--------------------------------------------------------------------------------------------------------------------------------------------------------------------NAKLLAITSCPNGIAHTYMAAENLQKAADRLGVSIKVETQGGIGVENKLTEEEIREADAIIIAADRSVNKDRFI-GKKLLSVGVQDGIRKPEELIQKALNGDIPVY-----
>5xraA_w000 weight: 0.1524 score: 0.00084 eval: n/a prob: n/a identity: 0.0982 startpos: 1
---------DIECFMVLNPSQQLAIAVLSLTLGTFT-VLENLLVLCVILHSRSLRCRP-----SYHFIGSLAVADLGSVIFVFHVFHRKDSRNVFLFKLGGVTASFTASVVAFCLMWTIAIVIAVLPGWNCKLQSVCSDIFPHKTYLMFWYAYMYILWKAHSHAVAKALIVYGSTTGN-TEYTAETIARELADAG-YEVDSRDA-----ASVEAGGLFEGFDLVLLGCDFIPLFDSLEETGAVACFGCGDSSWFCGAVDAIEEKLKNLGA-----
>5du2B_w000 weight: 0.1477 score: 0.00053 eval: n/a prob: n/a identity: 0.0473 startpos: 10
-NVANHGSVLPTLPVVSELARRGHDVGYVTGMVERAGAAIARPHLLYVLYGEVPIIAGQA---LAAWKRPACRINPGFASNVYSYSREMIEETGGVDERTVDARLADLLAGYGLRDRAGEFAVEDLNLVLIPREFQIAQDTFDERF--AF-VGRSGTWRPPEDGSPVVLISL--------GTTFYRQCAEAFAGTPWHVVMALGPLEAHRWVSLPAVLEHARLLVTHGGIGAVMDALTAGRPMVVVPFVVPAAEGARLREAVEDLAGALE-----
>4o9uB_w000 weight: 0.1048 score: 0.00108 eval: n/a prob: n/a identity: 0.0764 startpos: 1
------------MDLIQAAYFVVAILFIVGLKRMAHTTAKSGIVWAGWGLATFFWPGMILIAFAKLSRPILFQKAVNALVLALTVVIGLSLLWNDLFFLLALLFGVLMTLPIGGGDMPVAISFYNAFTGMAVGFEGGNPALMVAGTLVGMNRSVWSVLVGGKGSLKKVVFVPGYGMALSQAQHKLKELADLLEARGVEVKFAIAGRMPGHMNDLEEINPEFDVAVVIG-ANDVVILDVDKANVIVIKRGQGKGFAGVENELFYAENTRML-----
>2r4qA_309 weight: 0.0076 score: 10.34 eval: n/a prob: n/a identity: 0.1564 startpos: 1
---------------------------------------------------------------------------------------------------------------------------------------------------------------------AKILAVTACPTG--HTFMAADALKEKAKELGVEIKVETNGSSGIKHKLTAQEIEDAPAIIVAADKQVEMERFK-GKRVLQVPVTAGIRRPQELIEKAMNQDAPIY-----
>5dleA_306 weight: 0.0073 score: 10.64 eval: n/a prob: n/a identity: 0.1709 startpos: 1
-------------------------------------------------------------------------------------------------------------------------------------------------------------------KAEKIVAVTACPVGVAHTYIAAKKIENEAKKQGYSIRVETQGSIGIENALTEEEIKNASVVILAVDKDIDEKRFE-GKRVYKVSTVKAINNTENIIKESF--NAPVF-----
>2kyrA_310 weight: 0.0068 score: 10 eval: n/a prob: n/a identity: 0.1455 startpos: 1
-------------------------------------------------------------------------------------------------------------------------------------------------------------------MSKKLIALCACPMGLAHTFMAAQALEEAAVEAGYEVKIETQGADGIQNRLTAQDIAEATIIIHSVAVTPenERFE-SRDVYEITLQDAIKNAAGIIKEIEEMIASEQQ----
>2r4qA_206 weight: 0.0068 score: 219.84 eval: 2.6e-32 prob: 100 identity: 0.1564 startpos: 1
---------------------------------------------------------------------------------------------------------------------------------------------------------------------AKILAVTACPTG--HTFMAADALKEKAKELGVEIKVETNGSSGIKHKLTAQEIEDAPAIIVAADKQVEMERFK-GKRVLQVPVTAGIRRPQELIEKAMNQDAPIY-----
>5dleA_207 weight: 0.0059 score: 293.54 eval: 1e-45 prob: 100 identity: 0.1745 startpos: 1
-------------------------------------------------------------------------------------------------------------------------------------------------------------------KAEKIVAVTACPVGVAHTYIAAKKIENEAKKQGYSIRVETQGSIGIENALTEEEIKNASVVILAVDKDIDEKRFE-GKRVYKVSTVKAINNTENIIKESFNAP--VF-----

Alignment cluster 2 [ RosettaCM constraints ]

IDLabel

110882

26e59A_w000

32r48A_202

42r48A_305

55xraA_w000

65du2B_w000

74o9uB_w000

82r4qA_309

95dleA_306

102kyrA_310

112r4qA_206

125dleA_207

SSGCID - MygeA.20141.a PTS system fructose-specific EIIABC component MG_062 Domain 1 Parse 1 Confidence: 0.52 Download Results Archive Download Domain Models

SSGCID - MygeA.20141.a PTS system fructose-specific EIIABC component MG_062 Domain 1 Parse 1 Confidence: 0.52