SSGCID - MygeA.20157.a Putative pre-16S rRNA nuclease MG_505 Domain 1 Parse 1 Confidence: 0.96

Job ID	Status	Method	Username	Target	Length	Date (PST)	Expiration Date (PST)
10555	Complete	Structure prediction	ssgcid	SSGCID - MygeA.20157.a Pu...	138	4 Nov 2019	-

Domain ID	Domain	Parse	Confidence	Modeling Method	Model Span	Length	Date (PST)
10937	1	1	0.96	comparative modeling	1-138	138	10 Nov 2019

             1   .   10    .   20    .   30    .   40    .   50    .   60    .   70    .   80    .   90    .  100    .  110    .  120    .  130    .   
   sequence: MKYILAIDFGLKKIGTAIANTLDKYPSAFHVFEVKNNFKTAVNNLFLRIKNDGYELEKIVIGFPKFHYYSDIQKAIKSFKQLLEKRFNLPIILVDESNTTSAVKDKLITMDLKHKDFKKAKDTLAAVLILERFFQNYH
    spider3: --EEEEEE---EEEEEEEE-----E----EEEE----HHHHHHHHHHHHHH------EEEEE--------HHHHHHHHHHHHHHHHH---EEEEE----HHHHHHHHHH----HHHHHHHHHHHHHHHHHHHHHHH--
 deepconcnf: ---EEEEEE---EEEEEEE---------EEEEEE---HHHHHHHHHHHHHH----EEEEEEE-------HHHHHHHHHHHHHHHHHH---EEEE-----HHHHHHHHHH----HHHHHHHHHHHHHHHHHHHHHHH--
    psipred: ---EEEEE----EEEEEEE---------EEEEEE---HHHHHHHHHHHHHHH-----EEEE---------HHHHHHHHHHHHHHHHH---EEEEE----HHHHHHHHHH----HHHHHHHHHHHHHHHHHHHHHHH--

View

>10937
MKYILAIDFGLKKIGTAIANTLDKYPSAFHVFEVKNNFKTAVNNLFLRIKNDGYELEKIVIGFPKFHYYSDIQKAIKSFKQLLEKRFNLPIILVDESNTTSAVKDKLITMDLKHKDFKKAKDTLAAVLILERFFQNYH
>1vhxA_201 weight: 0.3518 score: 254.23 eval: 5.9e-42 prob: 100 identity: 0.2899 startpos: 1
SLRILGLDLGTKTLGVALSDEMGWTAQGIETIKIN-egDYGLSRLSELIKDYT--IDKIVLGFPKNMNGtpRGEASQTFAKVLETTYNVPVVLWDERLTTMAAEKMLIAADVSRQKRKKVIDKMAAVMILQGYLDSLN
>1vhxA_101 weight: 0.3010 score: 139.3 eval: 5.9e-05 prob: n/a identity: 0.2971 startpos: 1
SLRILGLDLGTKTLGVALSDEMGWTAQGIETIKINeeGDYGLSRLSELIKD--YTIDKIVLGFPKNmtVGPRGEASQTFAKVLETTYNVPVVLWDERLTTMAAEKMLIAADVSRQKRKKVIDKMAAVMILQGYLDSLN
>1vhxA_301 weight: 0.2862 score: 26.49 eval: n/a prob: n/a identity: 0.2899 startpos: 1
SLRILGLDLGTKTLGVALSDEMGWTAQGIETIKInaEGDYGLSRLSELIKDY--TIDKIVLGFPKNMNGtpRGEASQTFAKVLETTYNVPVVLWDERLTTMAAEKMLIAADVSRQKRKKVIDKMAAVMILQGYLDSLN
>1nu0A_102 weight: 0.0083 score: 117 eval: 0.00037 prob: n/a identity: 0.1957 startpos: 2
SGTLMAFDFGTKSIGVAVGQRITGTARPLPAIKAQ-DGTPDWNIIERLLKEW--QPDEIIVGLPLNmtEQPLTARARKFANRIHGRFGVEVKLHDERLSTVEA-------GGYRALNKGKVDSASAVIILESYMEQGY
>1nu0A_202 weight: 0.0069 score: 248.25 eval: 2.9e-44 prob: 100 identity: 0.1957 startpos: 2
SGTLMAFDFGTKSIGVAVGQRITGTARPLPAIKAQ-DGTPDWNIIERLLKEWQ--PDEIIVGLPLNMDGTelTARARKFANRIHGRFGVEVKLHDERLSTVEAGGYR-------ALNKGKVDSASAVIILESYMEQGY
>1nu0A_302 weight: 0.0067 score: 22.37 eval: n/a prob: n/a identity: 0.1957 startpos: 2
SGTLMAFDFGTKSIGVAVGQRITGTARPLPAIKAQD-GTPDWNIIERLLKEWQ--PDEIIVGLPLNMDGtpLTARARKFANRIHGRFGVEVKLHDERLSTV-------EAGGYRALNKGKVDSASAVIILESYMEQGY
>1nmnA_103 weight: 0.0050 score: 111.7 eval: 0.00058 prob: n/a identity: 0.2029 startpos: 1
SGTLLAFDFGTKSIGVAVGQRITGTARPLPAIKAQ-DGTPDWNIIERLLKEW--QPDEIIVGLPLNMDGTelTARARKFANRIHGRFGVEVKLHDERLSTV-----------------GKVDSASAVIILESYFEQGY
>1nmnA_303 weight: 0.0035 score: 20.68 eval: n/a prob: n/a identity: 0.2029 startpos: 1
SGTLLAFDFGTKSIGVAVGQRITGTARPLPAIKAQD-GTPDWNIIERLLKEWQ--PDEIIVGLPLNMDGtpLTARARKFANRIHGRFGVEVKLHDERLSTV-----------------GKVDSASAVIILESYFEQGY
>3bzcA_104 weight: 0.0034 score: 92.44 eval: 0.0028 prob: n/a identity: 0.1377 startpos: 328
PRATLGLDPGltGVKVAVVDATGKL-LDTATVYPhnQWDQTLAVLAALCAKH--QVELIAIGNGT------ASRETDKLAGELIKKykLTKIMVSEAG-sELAAKEFPEL------DVSLRGAVSIARRLQDPLAELV
>1nmnA_203 weight: 0.0028 score: 250.77 eval: 1.1e-41 prob: 100 identity: 0.2029 startpos: 1
SGTLLAFDFGTKSIGVAVGQRITGTARPLPAIKAQ-DGTPDWNIIERLLKEWQ--PDEIIVGLPLNMDGtpLTARARKFANRIHGRFGVEVKLHDERLSTV-----------------GKVDSASAVIILESYFEQGY
>2oceA_105 weight: 0.0027 score: 91.96 eval: 0.003 prob: n/a identity: 0.1522 startpos: 327
PRATLGLDPGltGVKVAVVDATGKL-LDTATVYPhnQWDQTLAVLAALCAKH--QVELIAIGNGT------ASRETDKLAGELIKKykLTKIMVSEAG-sELAAKEFPEL----------DVSLRGAVSIARRLQDPL
>4ep4A_106 weight: 0.0023 score: 88.15 eval: 0.004 prob: n/a identity: 0.0942 startpos: 1
-MVVAGIDPGITHLGLGVVAVekARLLHGEVVKTS-rVGRIHARVLEVLHRF--RPEAVAVEEQFF-eLAYKVGWALGAVLVAAFEAGVPVYAYGP-aAKEEVALMVRGilKEAPRPSHLADALAIALTHAFYARMGT
>1iv0A_304 weight: 0.0022 score: 12.32 eval: n/a prob: n/a identity: 0.1667 startpos: 1
-MRVGALDVGEARIGLAVGEEGVPLASGRGYLVRKTL-EEDVEALLDFVRREG--LGKLVVGLPLRTDLkaQAGKVLPLVEALRAR-GVEVELWDERFTTK-------------------------------------
>4ld0A_107 weight: 0.0021 score: 86.69 eval: 0.0046 prob: n/a identity: 0.1014 startpos: 1
-MVVAGIDPGITHLGLGVVAVekARLLHGEVVKTS-rVGRIHARVLEVLHRF--RPEAVAVQEQFF-eLAYKVGWALGAVLVAAFEAGVPVYAYGP-eVALMVRGILGLK--EAPRPSHLADALAIALTHAFYARMGT
>3thxB_110 weight: 0.0020 score: 84.12 eval: 0.0056 prob: n/a identity: 0.0942 startpos: 138
TSYLLCISENkiFIGIVGVQPAT-GEVVFDSFQDS----ASRSELETRMSSL--QPVELLLPSAL---SEQTEALIHRATSVSVQDDRIRVERMDnyFEYSHAFQAVTEFYA---IVNLEKPVICSLAAIIKYLKEFN
>4ep5A_109 weight: 0.0020 score: 84.9 eval: 0.0053 prob: n/a identity: 0.0797 startpos: 1
-MVVAGIDPGITHLGLGVVAVekARLLHGEVVKTS-rVGRIHARVLEVLHRF--RPEAVAVEE------AYKVGWALGAVLVAAFEAGVPVYAYGP-aAKEEVALMVRGilKEAPRPSHLANALAIALTHAFYARMGT
>4ld0B_108 weight: 0.0020 score: 85 eval: 0.0052 prob: n/a identity: 0.1377 startpos: 1
HMVVAGIDPGITHLGLGVVAVLKARLLHGEVVKTSppAKERVGRIHARVLEvrFRPEAVAVQEQFF-eLAYKVGWALGAVLVAAFEAGVPVYAYGP--aKEEVALMVRGigLKEarPSHLADALAIALTHAFYARMGT
>6s16B_305 weight: 0.0016 score: 8.37 eval: n/a prob: n/a identity: 0.1014 startpos: 1
HMVVAGIDPGITHLGLGVVaaLKARLLHGEVVKTSPqvGRIHARVLEVLHRFRP--EAVAVEEQFFYRqaYKVGWALGAVLVAAFEAGVPVYAYG----PMQVKQALAGHgaAKEEVALMVRGIlaLAIALTHAFYAR
>6s16A_306 weight: 0.0014 score: 8.31 eval: n/a prob: n/a identity: 0.0797 startpos: 1
HMVVAGIDPGITHLGLGVVaeLKARLLHGEVVKTSPQegRIHARVLEVLHRFRPEA-VAVEEQFFYRqlAYKVGWALGAVLVAAFEAGVPVYAYG--------PMQVKQALAGKEEVALMVRGIlaLAIALTHAFYAR
>4ep5A_307 weight: 0.0013 score: 7.33 eval: n/a prob: n/a identity: 0.0870 startpos: 1
-MVVAGIDPGITHLGLGVVaaLKARLLHGEVVKTSPqvGRIHARVLEVLHRFR--PEAVAVEE------AYKVGWALGAVLVAAFEAGVPVYAYG----PMQVKQALahGHAAKEEVALMVRGIllANALAIALTHAF
>1iv0A_204 weight: 0.0012 score: 193.26 eval: 2.1e-32 prob: 99.98 identity: 0.1594 startpos: 1
-MRVGALDVGEARIGLAVGEEGVPLASGRGYLVRK-TLEEDVEALLDFVRREG--LGKLVVGLPLRTDLkaQAGKVLPLVEAL-RARGVEVELWDERFTTK-------------------------------------
>4ep4A_309 weight: 0.0012 score: 6.98 eval: n/a prob: n/a identity: 0.1014 startpos: 1
-MVVAGIDPGITHLGLGVVaaLKARLLHGEVVKTSPQegRIHARVLEVLHRFR--PEAVAVEEQFFYRQnyKVGWALGAVLVAAFEAGVPVYAYG----PMQVKQALahGHAAKEEVALMVRGilAIALTHAFYARMG
>4ld0A_308 weight: 0.0012 score: 7.19 eval: n/a prob: n/a identity: 0.1087 startpos: 1
-MVVAGIDPGITHLGLGVVaaLKARLLHGEVVKTSPQegRIHARVLEVLHRFR--PEAVAVQEQFFYRqaYKVGWALGAVLVAAFEAGVPVYAYG---vALMVRGIllKEAPRPS---HLADALAIALTHAFYARMGT
>4ld0B_310 weight: 0.0012 score: 6.94 eval: n/a prob: n/a identity: 0.1087 startpos: 1
HMVVAGIDPGITHLGLGVVAVLKARLLHGEVVKTSPQegRIHARVLEVLHRFR--PEAVAVQeyRQNELAYKVGWALGAVLVAAFEAGVPVYAY------eEVALMVRGigLKEarPSHLADALAIALTHAFYARMGT

Alignment cluster 1 [ RosettaCM constraints ]

IDLabel

.2.4.6.8.10.12.14.16.18.20.22.24.26.28.30.32.34.36.38.40.42.44.46.48.50.52.54.56.58.60.62.64.66.68.70.72.74.76.78.80.82.84.86.88.90.92.94.96.98.100.102.104.106.108.110.112.114.116.118.120.122.124.126.128.130.132.134.136.138

110937

21vhxA_201

31vhxA_101

41vhxA_301

51nu0A_102

61nu0A_202

71nu0A_302

81nmnA_103

91nmnA_303

103bzcA_104

111nmnA_203

122oceA_105

134ep4A_106

141iv0A_304

154ld0A_107

163thxB_110

174ep5A_109

184ld0B_108

196s16B_305

206s16A_306

214ep5A_307

221iv0A_204

234ep4A_309

244ld0A_308

254ld0B_310

SSGCID - MygeA.20157.a Putative pre-16S rRNA nuclease MG_505 Domain 1 Parse 1 Confidence: 0.96 Download Results Archive Download Domain Models

SSGCID - MygeA.20157.a Putative pre-16S rRNA nuclease MG_505 Domain 1 Parse 1 Confidence: 0.96