SSGCID - MygeA.10014.d Oligopeptide transport ATP-binding protein OppD MG

SSGCID - MygeA.10014.d Oligopeptide transport ATP-binding protein OppD MG_079 Domain 1 Parse 1 Confidence: 0.77

Job ID	Status	Method	Username	Target	Length	Date (PST)	Expiration Date (PST)
10574	Complete	Structure prediction	ssgcid	SSGCID - MygeA.10014.d Ol...	402	4 Nov 2019	-

Domain ID	Domain	Parse	Confidence	Modeling Method	Model Span	Length	Date (PST)
10950	1	1	0.77	comparative modeling	1-402	402	10 Nov 2019

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   sequence: MALKRSNFFVDKDQQLKDNLILDITDLHVNFKVKDGILHAVRGIDLKVERGSIVGIVGESGSGKSVSVKSIIGFNDNAQTKAKLMNFKNVDITKLKKHQWKYYRGTYVSYISQDPLFSLNPTMTIGKQVKEAIYVASKRRYFQAKSDLKFALSNKEIDKKTYKSKLKEIKQTYQQKIKPINVEKKTLEILQFIGINDAKKRLKAFPSEFSGGMRQRIVIAIAVATEPDLIIADEPTTALDVTIQAKVLTLIKQLRDLLNITIIFISHNISLIANFCDFVYVMYAGKIVEQGLVEEIFTNPLHPYTWALISSIPEQKDKNKPLTSIPGVIPNMLTPPKGDAFASRNQYALAIDFEYHPPFFEVTKTHKAATWLLHPQAPKVEPPQAVIDNITLTKKALQFKDQ
 deepconcnf: ------------HHHH-----EEEEEEEEEEEE--EEEEEEEEEEEEEE---EEEEEE-----HHHHHHHHH-----------EEEE--EE-----HHHHHH-----EEEEE------------HHHHHHHHHHHHHHHHHHHHHHHHHHHH-------------HHHHHHHHH----HHHHHHHHHHHHHH-----HHHHHHH------HHHHHHHHHHHHHHH---EEEEE------HHHHHHHHHHHHHHHHHHH--EEEEEE--HHHHHH---EEEEEE--EEEEEE-HHHHHH----HHHHHHHH------------EE----------------------------------EEE-----EEEEEE-----------HHHHHHHHHHHHHH-----
    psipred: -----------HHHHH-----EEEE--EEEEE----EEEEEE--EEEE----EEEEE------HHHHHHHHH----------EEEEE--HHHHH--HHHHHHH---EEEEEE------------HHHHHHHHHHHHH-------------------------------HHHHH-----HHHHHHHHHHHHHH-----HHHHHHH--------HHHHHHHHHHHH----EEEE-----HHHHHHHHHHHHHHHHHHHHH--EEEEE---HHHHHHH--EEEE----EEEEE--HHHHH------HHHHHHHH---------EEE----------------------HHHHHH-HHH----EE----EEEE--------------HHHHHHHHHHHHHHHH---
    spider3: --------------------EEEEEEEEEEEE-----EEEE--EEEEE----EEEEEE-----HHHHHHHHH-----------EEEE--EE-----HHHHHHHHHHHHHHE----HHH-----EHHHHHHHHHHHHHHHHHHHHHHHHHHHH------HHHHHHHHHHHHHHHHH---HHHHHHHHHHHHHH-----HHHHHHH-------HHHHHHHHHHHHH----EEEE-----HHHHHHHHHHHHHHHHHHHHH---EEEEE--HHHHHH---EEEEEE--EEEEEEEHHHHHH----HHHHHHHHH----------------------------------HHHHHHHHH-----EEE---EEEEEEE-----------HHHHHHHHHHHHHH-----

View

GREMLIN (Neff(80%)/√Len: 132.0)

Alignment

>10950
MALKRSNFFVDKDQQLKDNLILDITDLHVNFKVKDGILHAVRGIDLKVERGSIVGIVGESGSGKSVSVKSIIGFNDNAQTKAKLMNFKNVDITKLKKHQWKYYRGTYVSYISQDPLFSLNPTMTIGKQVKEAIYVASKRRYFQAKSDLKFALSNKEIDKKTYKSKLKEIKQTYQQKIKPINVEKKTLEILQFIGINDAKKRLKAFPSEFSGGMRQRIVIAIAVATEPDLIIADEPTTALDVTIQAKVLTLIKQLRDLLNITIIFISHNISLIANFCDFVYVMYAGKIVEQGLVEEIFTNPLHPYTWALISSIPEQKDKNKPLTSIPGVIPNMLTPPKGDAFASRNQYALAIDFEYHPPFFEVTKTHKAATWLLHPQAPKVEPPQAVIDNITLTKKALQFKDQ
>4fwiB_201 weight: 0.1428 score: 565.34 eval: 1e-45 prob: 100 identity: 0.2587 startpos: 1
------------------SIIIRVEDLRAVYLVREGTIKAADGISLDILENSVTAIVGESASGKSTIIEAMTKTLPPNGrlSGRVLYKGKDLLTMREEELRKIRWKEIALVPQAAQQSLNPTMKVIEHFKDTVEAHGVR-------------------------------------WSHSELIEKASEKLRMVRL-NPEAVLNSYPLQLSGGMKQRVLIALALLLDPVVLILDEPTSALDVLTQAHIIQLLKELKKMLKITLIFVTHDIAVAAELADKVAVIYGGNLVEYNSTFQIFKNPLHPYTRGLINSIM----------PIPGDPPSLLNPPSGCRFHPRCEYAMEICKKEKPKWIRLDGEAHVACHLYEE---------------------------
>4fwiB_101 weight: 0.1416 score: 310 eval: 6.1e-11 prob: n/a identity: 0.2612 startpos: 1
------------------SIIIRVEDLRAVYLVREGTIKAADGISLDILENSVTAIVGESASGKSTIIEAMTKTLpnGRILSGRVLYKGKDLLTMREEELRKIRWKEIALVPQAAQQSLNPTMKVIEHFKDTVEAHGVR-------------------------------------WSHSELIEKASEKLRMVRL-NPEAVLNSYPLQLSGGMKQRVLIALALLLDPVVLILDEPTSALDVLTQAHIIQLLKELKKMLKITLIFVTHDIAVAAELADKVAVIYGGNLVEYNSTFQIFKNPLHPYTRGLINSIM----------PIPGDPPSLLNPPSGCRFHPRCEYAMEICKKEKPKWIRLDGEAHVACHLYEE---------------------------
>4fwiB_301 weight: 0.1392 score: 28.82 eval: n/a prob: n/a identity: 0.2587 startpos: 1
------------------SIIIRVEDLRAVYLVREGTIKAADGISLDILENSVTAIVGESASGKSTIIEAMTKTLPPnrILSGRVLYKGKDLLTMREEELRKIRWKEIALVPQAAQQSLNPTMKVIEHFKDTVEAHGV-------------------------------------RWSHSELIEKASEKLRMVRLN-PEAVLNSYPLQLSGGMKQRVLIALALLLDPVVLILDEPTSALDVLTQAHIIQLLKELKKMLKITLIFVTHDIAVAAELADKVAVIYGGNLVEYNSTFQIFKNPLHPYTRGLINSIM----------PIPGDPPSLLNPPSGCRFHPRCEYAMEICKKEKPKWIRLDGEAHVACHLYEE---------------------------
>4fwiB_w031 weight: 0.1151 score: 0.40989 eval: n/a prob: n/a identity: 0.2388 startpos: 1
------------------SIIIRVEDLRAVYLVREGTIKAADGISLDILENSVTAIVGESASGKSTIIEAMTKTLPNGRILSGRVLYKGKDLLTMREEELRKIRWKEIALVPQAAQQSLNPTMKVIEHFKDTVEA-HG------------------------------------VRWSHSELIEKASEKLRMVRL-NPEAVLNSYPLQLSGGMKQRVLIALALLLDPVVLILDEPTSALDVLTQAHIIQLLKELKKMLKITLIFVTHDIAVAAELADKVAVIYGGNLVEYNSTFQIFKNPLHPYTR----GLINS-----IMPIPGDPP-SLLNPPSGCRFHPRCEYAMEICKKEKPKWIRLDGEAHVACHLYE----------------------------
>3tuiC_w008 weight: 0.0615 score: 0.10153 eval: n/a prob: n/a identity: 0.1642 startpos: 1
-------------------HMIKLSNITKVFHQGTRTIQALNNVSLHVPAGQIYGVIGASGAGKSTLIRCVNLLE---RPTEGSVLVDGQELTTLSESELTKAR-RQIGMI--FQHFNLLSSRTVFGNVALPLEL-DN--------------------------------------TPKDEVKRRVTELLSLVGL---GDKHDSYPSNLSGGQKQRVAIARALASNPKVLLCDQATSALDPATTRSILELLKDINRRLGLTILLITHEMDVVKRICDCVAVISNGELIEQDTVSEVFSHPKTPLAQKFIQSTLHLDIPEDYQERLRLEFTGQSVDAPLLSETARRFNVNNNI--ISAQMDYAGGVKFGIMLHGTQQDT------------------------
>1z47A_w003 weight: 0.0502 score: 0.04269 eval: n/a prob: n/a identity: 0.1567 startpos: 2
------------------SMTIEFVGVEK--IYPGGAR-SVRGVSFQIREGEMVGLLGPSGSGKTTILRLIAGLE---RPTKGDVWIGGKRVTDLPPQKR------NVGLV--FQNYALFQHMTVYDNVSFGLREKRV---------------------------------------PKDEMDARVRELLRFMRL---ESYANRFPHELSGGQQQRVALARALAPRPQVLLFDEPFAAIDTQIRRELRTFVRQVHDEMGVTSVFVTHDQEEALEVADRVLVLHEGNVEQFGTPEEVYEKPGTLFVASFISNVWTRAVQNGRIEVAGAALPVDPAVSEVAVVVRPKVELQPAEREAHAQVVRSYSACWIRWVHMNVTRW------------------------
>2yyzA_w002 weight: 0.0452 score: 0.02650 eval: n/a prob: n/a identity: 0.1493 startpos: 1
-------------------PSIRVVNLKKYF----GKVKAVDGVSFEVKDGEFVALLGPSGCGKTTTLLMLAGI---YKPTSGEIYFDDVLVNDIPPKYR------EG-MV--FQNYALYPHMTVFENIAFPLR-ARR--------------------------------------ISKDEVEKRVVEIARKLLI---DNLLDRKPTQLSGGQQ-RVALARALVKQPKVLLFDE--PLSLANLRMIMRAEIKHLQQELGITSVYVTHDQAEAMTMASRIAVFNQGKLVQYGTPDEVYDSPKNMFVASFIG-NPPTNFLRDFSVSVENKQTILKRDDVIIKGIRPEHCRISRSIPGVVVNVKTEKGEIIKFVFLVPDLR------------------------
>2it1A_w002 weight: 0.0449 score: 0.03236 eval: n/a prob: n/a identity: 0.1642 startpos: 1
------------------MVEIKLEN--IVKKFGNFT--ALNNINLKIKDGEFMALLGPSGSGKSTLLYTIAGI-YK--PTSGKIYFDEKDVTELPPKDR------NVGLV--FQNWALYPHMTVYKNIAFPLEL-RK--------------------------------------APREEIDKKVREVAKMLHI---DKLLNRYPWQLSGGQQQRVAIARALVKEPEVLLLDEPLSNLDALLRLEVRAELKRLQKELGITTVYVTHDQAEALAMADRIAVIREGEILQVGTPDEVYYKPKYKFVGGFLVEDGKLVITEKSKLIPKQYVEIVKETGIGFPHDAEIIVFEPLGREQI-VTVSVNDS-IVKVFTIKVKEE------------------------
>2d62A_w002 weight: 0.0445 score: 0.02516 eval: n/a prob: n/a identity: 0.1418 startpos: 4
------------------MAEVKLIN--IWKRFGDVT--AVKDLSLEIKDGEFLVLLGPSGCGKTTTLRMIAGL---EEPTRGQIYIEDNLVADPEKGVFVPPKERDVAMVFQSY--ALYPHMTVYDNIAFPLKLRKV---------------------------------------PKQEIDKRVREVAEMLGL---TELLNRKPRELSGGQRQRVALGRAIIRRPKVFLMDEPLSNLDAKLRVKMRAELKKLQRQLGVTTIYVTHDQVEAMTMGDRIAVMNKGELQQVGTPDEVYYKPVNTFVAGFIGFL----DFGEFKLLLQDQFEVLEEENMHIDVPEENTVKATVDIIEKIVHLRRGNISFTAKFVSVVFDM------------------------
>1g291_w002 weight: 0.0437 score: 0.03158 eval: n/a prob: n/a identity: 0.1393 startpos: 1
------------------MAGVRLVD--VWKVFGEVT--AVREMSLEVKDGEFMILLGPSGCGKTTTLRMIAGLE---EPSRGQIYIGDKLVADF--VPPKDR---DIAMVFQS--YALYPHMTVYDNIAFPLKLRKV---------------------------------------PRQEIDQRVREVAELLGL---TELLNRKPRELSGGQRQRVALGRAIVRKPQVFLMDEPLSNLDAKLRVRMRAELKKLQRQLGVTTIYVTHDQVEAMTMGDRIAVMNRGVLQQVGSPDEVYDKPANTFVAGFIDGF--VDFGEFRLKLLPDQFEVLGELGYVGREVIFGIRPEDLYVRAVVEIVELGSERIVRLRFVGSF--------------------------
>1oxsC_w002 weight: 0.0417 score: 0.03239 eval: n/a prob: n/a identity: 0.1517 startpos: 1
------------------MVRIIVKNVSKV--FKKGKVVALDNVNINIENGERFGILGPSGAGKTTFMRIIAGLD---VPSTGELYFDDRLVASLIV-PPEDR---KIGMV--FQTWALYPNLTAFENIAFPLTNMKM---------------------------------------SKEEIRKRVEEVAKILDI---HHVLNHFPRELSGGQQQRVALARALVKDPSLLLLDEPFSNLDARMRDSARALVKEVQSRLGVTLLVVSHDPADIFAIADRVGVLVKGKLVQVGKPEDLYDNPVSIQVASLIGE-----------INELEGKVTNEGVVIGSLRFIGIRPDVKLVGKGKVKVIGYQGGLFRITITYIHSGE------------------------
>4yerB_w002 weight: 0.0408 score: 0.03317 eval: n/a prob: n/a identity: 0.1443 startpos: 2
------------------EDIIVVENLVKKF----GDFEAVKGVSFSVKKGEIFAFLGPNGAGKTTTIHMLTTL---LKPTSGKAWVAGHDVLKE-PREVRR----KIGIV--FQDQSLDRELTAYENMYIHGKYGYG----------------------------------------GEKLKKRILELLEFVEL---LEFKDKPVKTFSGGMARRLEIARSLIHEPEVLFLDEPTIGLDPHTRAHMWEYISKMKKEHNMTIFLTTHYMDEAEQLADRVAIIDHGKIIALGTPTELKR---------------------------------MVGKEIIYVRCRKLPDGR--LELKIPTLNDV--FLHLTGRELREEGP------------------------
>1oxxK_w002 weight: 0.0404 score: 0.03160 eval: n/a prob: n/a identity: 0.1493 startpos: 1
------------------MVRIIVKNVSKV--FKKGKVVALDNVNINIENGERFGILGPSGAGKTTFMRIIAGL---DVPSTGELYFDDRLVASLIV-PPEDR---KIGMV--FQTWALYPNLTAFENIAFPLTNMKM---------------------------------------SKEEIRKRVEEVAKILDI---HHVLNHFPRELSGAQQQRVALARALVKDPSLLLLDEPFSNLDARMRDSARALVKEVQSRLGVTLLVVSHDPADIFAIADRVGVLVKGKLVQVGKPEDLYDNPVSIQVASLIG-----------EINELEGKVTNEGVVIGSLRFIGIRPEVKLVGKGKVKVIGYQGGLFRITITYIHSGE------------------------
>6cvlD_102 weight: 0.0038 score: 237.6 eval: 2.2e-08 prob: n/a identity: 0.1766 startpos: 1
-------------------HMIKLSNITKVFHQGTRTIQALNNVSLHVPAGQIYGVIGASGAGKSTLIRCVNLLER---PTEGSVLVDGQELTTLSESELTKAR-RQIGMIFQHF--NLLSSRTVFGNVALPLELDN---------------------------------------TPKDEVKRRVTELLSLVGLGD---KHDSYPSNLSGGQKQRVAIARALASNPKVLLCDQATSALDPATTRSILELLKDINRRLGLTILLITHEMDVVKRICDCVAVISNGELIEQDTVSEVFSHPKTPLAQKFIQSTLHLDIPEDYQERLQAEPFTDCVPMLRLEFTGqaPLLSETARRFNVNNAIIS-gVKFGIMLTEM-----gTQQDTQAAIAWLQ-hH-----
>3tuiC_302 weight: 0.0036 score: 14.52 eval: n/a prob: n/a identity: 0.1741 startpos: 1
-------------------HMIKLSNITKVFHQGTRTIQALNNVSLHVPAGQIYGVIGASGAGKSTLIRCVNLL---ERPTEGSVLVDGQELTTLSESELTKARRQ-IGMIFQH--FNLLSSRTVFGNVALPLELD---------------------------------------NTPKDEVKRRVTELLSLVGL---GDKHDSYPSNLSGGQKQRVAIARALASNPKVLLCDQATSALDPATTRSILELLKDINRRLGLTILLITHEMDVVKRICDCVAVISNGELIEQDTVSEVFSHPKTPLAQKFIQSTLHLDIPEdrLQA---------EPFTDCVPMLraPLLSETARRFNVnmDYAGGVKFGIMLTetQ--------QDTQAAIAWLQEHHVKVEV
>3tuiC_103 weight: 0.0034 score: 235.1 eval: 2.7e-08 prob: n/a identity: 0.1741 startpos: 1
-------------------HMIKLSNITKVFHQGTRTIQALNNVSLHVPAGQIYGVIGASGAGKSTLIRCVNLLER---PTEGSVLVDGQELTTLSESELTKAR-RQIGMIFQHF--NLLSSRTVFGNVALPLELDN---------------------------------------TPKDEVKRRVTELLSLVGLG---DKHDSYPSNLSGGQKQRVAIARALASNPKVLLCDQATSALDPATTRSILELLKDINRRLGLTILLITHEMDVVKRICDCVAVISNGELIEQDTVSEVFSHPKTPLAQKFIQSTLHLDIPEDYQERLQAEPFTDCVPMLRLEFTGQspLLSETARRFNVNNNIIS-gVKFGIMLTEM-----gTQQDTQAAIAWLQ-hH-----
>6cvlD_303 weight: 0.0029 score: 14.48 eval: n/a prob: n/a identity: 0.1667 startpos: 1
-------------------HMIKLSNITKVFHQGTRTIQALNNVSLHVPAGQIYGVIGASGAGKSTLIRCVNLLERPTE---GSVLVDGQELTTLSESELTKARRQ-IGMIFQ----HFNLlrTVFGNVALPLELD---------------------------------------NTPKDEVKRRVTELLSLVGL---GDKHDSYPSNLSGGQKQRVAIARALASNPKVLLCDQATSALDPATTRSILELLKDINRRLGLTILLITHEMDVVKRICDCVAVISNGELIEQDTVSEVFSHPKTPLAQKFIQSTLHLdqAEPfcVPmvDAP--LL------------SETARRfaIISAQMDYAGGVKFGIMLTEMHG-----TQQDTQAAIAWLQEHHVKVEV
>6cvlC_304 weight: 0.0026 score: 14.41 eval: n/a prob: n/a identity: 0.1692 startpos: 1
-------------------HMIKLSNITKVFHQGTRTIQALNNVSLHVPAGQIYGVIGASGAGKSTLIRCVNLLERPTE---GSVLVDGQELTTLSESELTKARRQ-IGMIFQ----HFNLlrTVFGNVALPLELD---------------------------------------NTPKDEVKRRVTELLSLVGL---GDKHDSYPSNLSGGQKQRVAIARALASNPKVLLC-QATSALDPATTRSILELLKDINRRLGLTILLITHEMDVVKRICDCVAVISNGELIEQDTVSEVFSHPKTPLAQKFIQSTLHLDIPEDYQERLQ------AEPFTDCvfaPLLSETARRfaIISAQMDYAGGVKFGIMLTEMHG-----TQQDTQAAIAWLQEHHVKVEV
>6cvlC_107 weight: 0.0025 score: 229.2 eval: 4.3e-08 prob: n/a identity: 0.1741 startpos: 1
-------------------HMIKLSNITKVFHQGTRTIQALNNVSLHVPAGQIYGVIGASGAGKSTLIRCVNLLER---PTEGSVLVDGQELTTLSESELTKAR-RQIGMIFQHF--NLLSSRTVFGNVALPLELDN---------------------------------------TPKDEVKRRVTELLSLVGLGDKHDS---YPSNLSGGQKQRVAIARALASNPKVLLCQ-ATSALDPATTRSILELLKDINRRLGLTILLITHEMDVVKRICDCVAVISNGELIEQDTVSEVFSHPKTPLAQKFIQSTLHLDIPEDYQERLQAEPFTDCVPMLRLEFTGqaPLLSETARRFNVNNAIIS-gVKFGIMLTEM-----gTQQDTQAAIAWLQ-hH-----
>3tifA_202 weight: 0.0023 score: 477.77 eval: 1e-45 prob: 100 identity: 0.1368 startpos: 1
--------------------MVKLKNVTKTYKMGEEIIYALKNVNLNIKEGEFVSIMGPSGSGKSTMLNIIGCLDKPT---EGEVYIDNIKTNDLDDDELTKIRRDKIGFVFQQF--NLIPLLTALENVELPLIfrGAM------------------SG--------------------EERRKRALECLKMAELE--ERFANHKPNQLSGGQQQRVAIARALANNPPIILADQPTWALDSKTGEKIMQLLKKLNEEDGKTVVVVTHDINVAR-FGERIIYLKDGEVEREEKLR------------------------------------------------------------------------------------------------------------
>4mkiA_106 weight: 0.0023 score: 230.4 eval: 3.9e-08 prob: n/a identity: 0.1567 startpos: 1
-----------------RPMPIKVENVSFIYNEgpYATVALKDINFSIDDEEFVGIIGHTGSGKSTLIQQLNGLLK---PSKGKIYINGIDITdvSLKDIRK----QVGLVFQYPEYQLF-EETVFKDIAFGPSNLG---------------------------------------LSEEEVKERVYEAMEIVGISKE--LADKSPFELSGGQKRRVAIAGILAMRPKILILDEPTAGLDPKGKQEILNKIKEIHDKYKMITILVSHNMEDIARIADKIIVMNRGKIELIGTPREVFREasVPQITSLARELR-----------------------------------------------------------------------------------------
>1b0uA_203 weight: 0.0021 score: 455.35 eval: 1e-45 prob: 100 identity: 0.1766 startpos: 1
-------------------NKLHVIDLHKRY----GGHEVLKGVSLQARAGDVISIIGSSGSGKSTFLRCINFLEKP---SEGAIIVNGQNINLVrkNQLRLLR-TRLTMVFQHFN--LWSHMTVLENVMEAPIQVLGL------------------SK--------------------HDARERALKYLAKVGID--ERAQGKYPVHLSGGQQQRVSIARALAMEPDVLLFDEPTSALDPELVGEVLRIMQQLAE-EGKTMVVVTHEMGFARHVSSHVIFLHQGKIEEEGDPEQVFGNPQSPRLQQFLKGSLKKLE-------------------------------------------------------------------------------------
>4u02A_109 weight: 0.0020 score: 228.3 eval: 4.6e-08 prob: n/a identity: 0.1940 startpos: 1
-----------------MEPIIRIRNLHKWFG----PLHVLKGIHLEVAPGEKLVIIGPSGSGKSTLIRTINRLEDF---QEGEVVVDGLSVK--DDRALREIR-REVGMVFQQF--NLFPHMTVLENVTLAPMRVRR--------------------------------------WPREKAEKKALELLERVGIL---DQARKYPAQLSGGQQQRVAIARALAMEPKIMLFDEPTSALDPEMVGEVLDVMRDLAQG-GMTMVVVTHEMGFAREVADRVVFMDGGQIVEEGRPEEIFTRPKEERTRSFLQRVLH----------------------------------------------------------------------------------------
>1b0uA_308 weight: 0.0019 score: 13.54 eval: n/a prob: n/a identity: 0.1692 startpos: 1
-------------------NKLHVIDLHKRyh------EVLKGVSLQARAGDVISIIGSSGSGKSTFLRCINFLEKPS---EGAIIVNGQNilKVADKNQLRLLRTRLTMVFQH--FNLWSHMTVLENVMEAPIQVL--------------------------------------GLSKHDARERALKYLAKVGID--ERAQGKYPVHLSGGQQQRVSIARALAMEPDVLLFDEPTSALDPELVGEVLRIMQQLAEE-GKTMVVVTHEMGFARHVSSHVIFLHQGKIEEEGDPEQVFGNPQSPRLQQFLKGSLKKLE-------------------------------------------------------------------------------------
>2d62A_108 weight: 0.0019 score: 229 eval: 4.4e-08 prob: n/a identity: 0.1368 startpos: 1
---------------MIGMAEVKLINIWKRFG----DVTAVKDLSLEIKDGEFLVLLGPSGCGKTTTLRMIAGLEE---PTRGQIYIEDNLVADPEKGVFVPPKERDVAMVFQSY--ALYPHMTVYDNIAFPLKLR---------------------------------------KVPKQEIDKRVREVAEMLGLT---ELLNRKPRELSGGQRQRVALGRAIIRRPKVFLMDEPLSNLDAKLRVKMRAELKKLQRQLGVTTIYVTHDQVEAMTMGDRIAVMNKGELQQVGTPDEVYYKPVNTFVAGFIGS-------------------------------------------------------------------------------------------
>3dhwC_110 weight: 0.0019 score: 227.9 eval: 4.8e-08 prob: n/a identity: 0.1617 startpos: 1
--------------------MIKLSNITKVFHQGTRTIQALNNVSLHVPAGQIYGVIGASGAGKSTLIRCVNLLERP---TEGSVLVDGQELTTLSESELTKAR-RQIGMIFQHF--NLLSSRTVFGNVALPLELDNTPK---------------------------------------DEVKRRVTELLSLVGLG---DKHDSYPSNLSGGQKQRVAIARALASNPKVLLCDEATSALDPATTRSILELLKDINRRLGLTILLITHEMDVVKRICDCVAVISNGELIEQDTVSEVFSHPKTPLAQKFIQSTL-----------------------------------------------------------------------------------------
>1z47A_105 weight: 0.0018 score: 231.1 eval: 3.7e-08 prob: n/a identity: 0.1468 startpos: 3
-------------------MTIEFVGVEKIYP---GGARSVRGVSFQIREGEMVGLLGPSGSGKTTILRLIAGLER---PTKGDVWIGGKRVTDLPPQK------RNVGLVFQNY--ALFQHMTVYDNVSFGLREKR---------------------------------------VPKDEMDARVRELLRFMRLE---SYANRFPHELSGGQQQRVALARALAPRPQVLLFDEPFAAIDTQIRRELRTFVRQVHDEMGVTSVFVTHDQEEALEVADRVLVLHEGNVEQFGTPEEVYEKPGTLFVASFIG--------------------------------------------------------------------------------------------
>2it1A_104 weight: 0.0017 score: 233.6 eval: 3e-08 prob: n/a identity: 0.1542 startpos: 1
------------------MVEIKLENIVKKFG----NFTALNNINLKIKDGEFMALLGPSGSGKSTLLYTIAGIYK---PTSGKIYFDEKDVTELPPKD------RNVGLVFQNW--ALYPHMTVYKNIAFPLELRK---------------------------------------APREEIDKKVREVAKMLHID---KLLNRYPWQLSGGQQQRVAIARALVKEPEVLLLDEPLSNLDALLRLEVRAELKRLQKELGITTVYVTHDQAEALAMADRIAVIREGEILQVGTPDEVYYKPKYKFVGGFLG--------------------------------------------------------------------------------------------
>3tifA_305 weight: 0.0017 score: 13.7 eval: n/a prob: n/a identity: 0.1418 startpos: 1
--------------------MVKLKNVTKTYKMGEEIIYALKNVNLNIKEGEFVSIMGPSGSGKSTMLNIIGCLDKP---TEGEVYIDNIKTNDLDDDELTKIRRDKIGFVFQ--QFNLIPLLTALENVELPLIFKYR------------------------------------GAMSGEERRKRALECLKMAELE--ERFANHKPNQLSGGQQQRVAIARALANNPPIILADQPTWALDSKTGEKIMQLLKKLNEEDGKTVVVVTHDI-NVARFGERIIYLKDGEVEREEKLR------------------------------------------------------------------------------------------------------------
>1f3oA_307 weight: 0.0016 score: 13.57 eval: n/a prob: n/a identity: 0.1443 startpos: 1
--------------------MIKLKNVTKTYKMGEEIIYALKNVNLNIKEGEFVSIMGPSGSGKSTMLNIIGCLDKPTE---GEVYIDNIKTNDLDDDELTKIRRDKIGFVFQ--QFNLIPLLTALENVELPLIFKYR------------------------------------GAMSGEERRKRALECLKMAELE--ERFANHKPNQLSGGQQQRVAIARALANNPPIILADEPTGALDSKTGEKIMQLLKKLNEEDGKTVVVVTHDI-NVARFGERIIYLKDGEVEREEKLRGF----------------------------------------------------------------------------------------------------------
>1l2tA_309 weight: 0.0015 score: 13.49 eval: n/a prob: n/a identity: 0.1443 startpos: 1
--------------------MIKLKNVTKTYKMGEEIIYALKNVNLNIKEGEFVSIMGPSGSGKSTMLNIIGCLDKP---TEGEVYIDNIKTNDLDDDELTKIRRDKIGFVFQ--QFNLIPLLTALENVELPLIF------------------------------------KYRGAMSGEERRKRALECLKMAELE--ERFANHKPNQLSGGQQQRVAIARALANNPPIILADQPTGALDSKTGEKIMQLLKKLNEEDGKTVVVVTHDI-NVARFGERIIYLKDGEVEREEKLR------------------------------------------------------------------------------------------------------------
>4u02A_306 weight: 0.0015 score: 13.65 eval: n/a prob: n/a identity: 0.1891 startpos: 1
-----------------MEPIIRIRNLHKWfl------HVLKGIHLEVAPGEKLVIIGPSGSGKSTLIRTINRLED---FQEGEVVVDGLSVK--DDRALREIRREV-GMVFQQ--FNLFPHMTV---LENVTLAPMRVR-----------------------------------RWPREKAEKKALELLERVGI---LDQARKYPAQLSGGQQQRVAIARALAMEPKIMLFDEPTSALDPEMVGEVLDVMRDLAQG-GMTMVVVTHEMGFAREVADRVVFMDGGQIVEEGRPEEIFTRPKEERTRSFLQRVLH----------------------------------------------------------------------------------------
>1f3oA_206 weight: 0.0014 score: 434.5 eval: 1e-45 prob: 100 identity: 0.1418 startpos: 1
--------------------MIKLKNVTKTYKMGEEIIYALKNVNLNIKEGEFVSIMGPSGSGKSTMLNIIGCLDKPT---EGEVYIDNIKTNDLDDDELTKIRRDKIGFVFQQF--NLIPLLTALENVELPLIFKYRG----------------AM--------------------SGEERRKRALECLKMAELEE--RFANHKPNQLSGGQQQRVAIARALANNPPIILADEPTGALDSKTGEKIMQLLKKLNEEDGKTVVVVTHDIN-VARFGERIIYLKDGEVEREEKLRGF----------------------------------------------------------------------------------------------------------
>2oljA_310 weight: 0.0014 score: 13.31 eval: n/a prob: n/a identity: 0.1741 startpos: 1
------------------LQMIDVHQLKKSfl------EVLKGINVHIREGEVVVVIGPSGSGKSTFLRCLNLL---EDFDEGEIIIDGINLKatNLNKVREEV----GMVFQ--RFNLFPHMTV---LNNITLAPMKVR-----------------------------------KWPREKAEAKAMELLDKVGL---KDKAHAYPDSLSGGQAQRVAIARALAMEPKIMLFDEPTSALDPEMVGEVLSVMKQLANE-GMTMVVVTHEMGFAREVGDRVLFMDGGYIIEEGKPEDLFDRPQHERTKAFLSKVF-----------------------------------------------------------------------------------------
>1l2tA_205 weight: 0.0013 score: 404.41 eval: 1e-45 prob: 100 identity: 0.1343 startpos: 1
--------------------MIKLKNVTKTYKMGEEIIYALKNVNLNIKEGEFVSIMGPSGSGKSTMLNIIGCLDK-PT--EGEVYIDNIKTNDLDDDELTKIRRDKIGFVFQQF--NLIPLLTALENVELPLIFKYR----------------GAMSG--------------------EERRKRALECLKMAELE--ERFANHKPNQLSGGQQQRVAIARALANNPPIILADQPTGALDSKTGEKIMQLLKKLNEEDGKTVVVVTHDINVARF-GERIIYLKDGEVEREEKLR------------------------------------------------------------------------------------------------------------
>5lj9A_207 weight: 0.0013 score: 373.68 eval: 1e-45 prob: 100 identity: 0.1542 startpos: 1
-----------------MTPLLELKDIRRSYPAGDEQVEVLKGISLDIYAGEMVAIVGASGSGKSTLMNILGCLDKA---TSGTYRVAGQDVATLDADALAQLRREHFGFIFQRY--HLLSHLTAEQNVEVPAVYA-GL------------------ER--------------------KQRLLRAQELLQRLGLE---DRTEYYPAQLSGGQQQRVSIARALMNGGQVILADEPTGALDSHSGEEVMAILHQLRDR-GHTVIIVTHDPQV-AAQAERVIEIRDGEIVRLEHHH------------------------------------------------------------------------------------------------------------
>2zu0C_204 weight: 0.0001 score: 343.22 eval: 1e-45 prob: 100 identity: 0.1542 startpos: 1
--------------------MLSIKDLHVSVED----KAILRGLSLDVHPGEVHAIMGPNGSGKSTLSATLAGREDYE-VTGGTVEFKGKDLLALSPED---RAGEGIFMAFQYPVE--IPGVSNQFFLQTALNAVRSYRG--------------------------------QETLDRFDFQDLMEEKIALLKMPE-DLLTRSVNVGFSGGEKKRNDILQMAVLEPELCILDESDSGLDIDALKVVADGVNSLRDG-KRSFIIVTHYQRILDykPDYVHVLYQGRIVKSGDFTLVKQLEEQGYGWLTEQ--------------------------------------------------------------------------------------------

Alignment cluster 1 [ RosettaCM constraints ]

IDLabel

.2.4.6.8.10.12.14.16.18.20.22.24.26.28.30.32.34.36.38.40.42.44.46.48.50.52.54.56.58.60.62.64.66.68.70.72.74.76.78.80.82.84.86.88.90.92.94.96.98.100.102.104.106.108.110.112.114.116.118.120.122.124.126.128.130.132.134.136.138.140.142.144.146.148.150.152.154.156.158.160.162.164.166.168.170.172.174.176.178.180.182.184.186.188.190.192.194.196.198.200.202.204.206.208.210.212.214.216.218.220.222.224.226.228.230.232.234.236.238.240.242.244.246.248.250.252.254.256.258.260.262.264.266.268.270.272.274.276.278.280.282.284.286.288.290.292.294.296.298.300.302.304.306.308.310.312.314.316.318.320.322.324.326.328.330.332.334.336.338.340.342.344.346.348.350.352.354.356.358.360.362.364.366.368.370.372.374.376.378.380.382.384.386.388.390.392.394.396.398.400.402

110950

24fwiB_201

34fwiB_101

44fwiB_301

54fwiB_w031

63tuiC_w008

71z47A_w003

82yyzA_w002

92it1A_w002

102d62A_w002

111g291_w002

121oxsC_w002

134yerB_w002

141oxxK_w002

156cvlD_102

163tuiC_302

173tuiC_103

186cvlD_303

196cvlC_304

206cvlC_107

213tifA_202

224mkiA_106

231b0uA_203

244u02A_109

251b0uA_308

262d62A_108

273dhwC_110

281z47A_105

292it1A_104

303tifA_305

311f3oA_307

321l2tA_309

334u02A_306

341f3oA_206

352oljA_310

361l2tA_205

375lj9A_207

382zu0C_204

SSGCID - MygeA.10014.d Oligopeptide transport ATP-binding protein OppD MG_079 Domain 1 Parse 1 Confidence: 0.77 Download Results Archive Download Domain Models

SSGCID - MygeA.10014.d Oligopeptide transport ATP-binding protein OppD MG_079 Domain 1 Parse 1 Confidence: 0.77