SSGCID - MygeA.19976.a Spermidine putrescine transport system permease protein PotC homolog MG_044 Domain 1 Parse 1 Confidence: 0.82
| Job ID | Status | Method | Username | Target | Length | Date (PST) | Expiration Date (PST) |
|---|
| 13998 | Complete | Structure prediction | ssgcid | SSGCID - MygeA.19976.a Sp... | 284 | 15 Jan 2020 | - |
| Domain ID | Domain | Parse | Confidence | Modeling Method | Model Span | Length | Date (PST) |
|---|
| 14211 | 1 | 1 | 0.82 | comparative modeling | 1-284 | 284 | 19 Jan 2020 |
1 . 10 . 20 . 30 . 40 . 50 . 60 . 70 . 80 . 90 . 100 . 110 . 120 . 130 . 140 . 150 . 160 . 170 . 180 . 190 . 200 . 210 . 220 . 230 . 240 . 250 . 260 . 270 . 280
sequence: MKKHFKNLIKNSYFFLLITLIYLPLLIVVLVSLNGSSSRGNIVLDFGNVLNPNPDSKSAYLRLGETDFATPLINSIIIGVITVLVSVPIAVISAFALLRTRNALKKTIFGITNFSLATPDIITAISLVLLFANTWLSFNQQLGFFTIITSHISFSVPYALILIYPKIQKLNPNLILASQDLGYSPLKTFFHITLPYLMPSIFSAVLVVFATSFDDYVITSLVQGSVKTIATELYSFRKGIKAWAIAFGSILILISVLGVCLITLQKYLREKRKEIIKIRQWKNS
psipred: -------HHHHHHHHHHHHHHHHHHHHHEEEE--------------EE----HHHHHHHH-----HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH-----HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH------HHHHHHHHHHH---HHEEEEHHHHH-----HHHHHHH----HHHHHHHHHHHHHHHHHHHHHHHHHHHHHH-EEEEEEE--------EEEEE------HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH---
spider3: ------HHHHHHHHHHHHHHHHHHHHHHHHHHH-------------------HHHHHHHHH----HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH---HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH------HHHHHHHHHHH-HHHHHHHHHHHHH-----HHHHHHH----HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH------HHHHHHH------HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH---
deepconcnf: ----HHHHHHHHHHHHHHHHHHHHHHHHHHHHH-------------------HHHHHHHHHH---HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH----HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH--------HHHHHHHHHHHHHHHHHHHHHHHHH----HHHHHHHHH----HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH-----HHHHHHHHH----HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH---
>14211
MKKHFKNLIKNSYFFLLITLIYLPLLIVVLVSLNGSSSRGNIVLDFGNVLNPNPDSKSAYLRLGETDFATPLINSIIIGVITVLVSVPIAVISAFALLRTRNALKKTIFGITNFSLATPDIITAISLVLLFANTWLSFNQQLGFFTIITSHISFSVPYALILIYPKIQKLNPNLILASQDLGYSPLKTFFHITLPYLMPSIFSAVLVVFATSFDDYVITSLVQGSVKTIATELYSFRKGIKAWAIAFGSILILISVLGVCLITLQKYLREKRKEIIKIRQWKNS
>2onkC_301 weight: 0.1116 score: 16.75 eval: n/a prob: n/a identity: 0.1479 startpos: 1
-MRLLFSALLALLSSIILLFVLLPVAATVTLQL-----------------FNFDEFLKAASD---PAVWKVVLTTYYAALISTLIAVIFGTPLAYILARKSFPGKSVVEGIVDLPVVIPHTVAGIALLVVFglIGSFSPLKfaLPGIVVAMLFVSVPIYINQAKEGFASVDVRLEHVARTLGSSPLRVFFTVSLPLSVRHIVAGAIMSWARGISEFGAVVVIAYYPMIAPTLIYErlSEGLSAAMPVAAILILLSLAVFVALRIIVG-----------------
>3d31C_201 weight: 0.1077 score: 237.78 eval: 4.6e-31 prob: 100 identity: 0.1373 startpos: 1
----PLTFVFSFLLLVLFLFIFLTLSNMIFEQITE----------------DFSGLVKAAG---NRSVISSIFLSLYAGFLATLLALLLGAPTGYILARFDFPGKRLVESIIDVPVVVPHTVAGIALLTVFGSRGLiiQFRDALPGIVVAMLFVSMPYLANSAREGFKSVDPRLENAARSLGAPLWKAFFFVTLPLSARYLLIGSVMTWARAISEFGAVVILAYYPMVGPTLIYDRFiyGLSASRPIAVLLILVTLSIFLVIR---------------------
>2onkC_w053 weight: 0.1066 score: 0.61605 eval: n/a prob: n/a identity: 0.1585 startpos: 1
----MRLLFSALLALLSSIILLFVLLPVAATVT--------------LQLFNFDEFLKAAS---DPAVWKVVLTTYYAALISTLIAVIFGTPLAYILARKSFPGKSVVEGIVDLPVVIPHTVAGIALLVVFLIGSFSPLKFVALPGIVVAMLFVSVPIYINQAKEGFASVDVRLEHVARTLGSSPLRVFFTVSLPLSVRHIVAGAIMSWARGISEFGAVVVIAYYPMIAPTLIYRYLSEGLSAAMPVAAILILLSLAVFVALRIIV------------------
>3d31C_w049 weight: 0.0974 score: 0.58266 eval: n/a prob: n/a identity: 0.1444 startpos: 1
----PLTFVFSFLLLVLFLFIFLTLSNMIFEQ----------------ITEDFSGLVKAAG---NRSVISSIFLSLYAGFLATLLALLLGAPTGYILARFDFPGKRLVESIIDVPVVVPHTVAGIALLTVFGEPLESYIQFRALPGIVVAMLFVSMPYLANSAREGFKSVDPRLENAARSLGAPLWKAFFFVTLPLSARYLLIGSVMTWARAISEFGAVVILAYYPMVGPTLIYDRFISYGSASRPIAVLLILV-TLSIFLVIR--------------------
>2r6gG_w050 weight: 0.0862 score: 0.53838 eval: n/a prob: n/a identity: 0.1620 startpos: 5
----ARLFITHLLLLLFIAAIMFPLLMVVAIS--LRQGNFA-TGSLIPEQISWDHWKLALGITPPPFVLLWLWNSVKVAGISAIGIVALSTTCAYAFARMRFPGKATLLKGMLIFQMFPAVLSLVALYALFDRLYIPFIGLNTHGGVIFAYL-GGIALHVWTIKGYFETIDSSLEEAAALDGATPWQAFRLVLLPLSVPILAVVFILSFIAAITEVPVASLLLRDSYTLAVGMQQYLQNYLGDFAAAAVMSALPITIVFLLAQRWLVNGL--------------
>4jbwF_w029 weight: 0.0712 score: 0.31507 eval: n/a prob: n/a identity: 0.1725 startpos: 4
----GLLGLLVGYLVVLMYALFAITTLILSAFNNQIGFYQSITADGNWVTTGWKNFTRVFTDEGIQPFLAIFVWTVVFSLITVFLTVAVGMVLACLVQWEALRGKAVYRVLLILPYAVPSFISILIFKGLFMLSALFGVKTTARTMLIIVNTWLGYPYMMILCMGLLKAIPDDLYEASAMDGAGPFQNFFKITLPLLIKPLTPLMIASFAFNFNNFVLIQLLTNYTDLLVNYTYRIAFEDFGLAAAIA---TLI-FLLVGALAIVNLKAT--------------
>4khzF_w032 weight: 0.0702 score: 0.34776 eval: n/a prob: n/a identity: 0.1338 startpos: 4
----GLLGLLVGYLVVLMYALFAITTLILSAGLYIFANRKAYAWRYVYPGMAGWKNFTRVFEGIQKPFLAIFVWTVVFSLITVFLTVAVGMVLACLVQWEALRGKAVYRVLLILPYFISILIFKGLFEINMMLSALFGVKTTARTMLIIVNTWLGYPYMMILCMGLLKAIPDDLYEASAMDGAGPFQNFFKITLPLLIKPLTPLMIASFAFNFNNFVLIQLLTNYTDLLVNYTYRI--AFEGGGGQDFGLAAAI-ATLIFLLVGALAIVN--------------
>3rlfF_w026 weight: 0.0659 score: 0.28565 eval: n/a prob: n/a identity: 0.1444 startpos: 12
----GLLGLLVGYLVVLMYAGEYLFAITTLILSYIFANRKA----YAWRYVYPGMANFTRVFTDEGIQLAIFVWTVVFSLITVFLTVAVGMVLACLVQWEALRGKAVYRVLLILPYFISILIFKGLFGEINMMLSALFGVTTARTMLIIVNTWLGYPYMMILCMGLLKAIPDDLYEASAMDGAGPFQNFFKITLPLLIKPLTPLMIASFAFNFNNFVLIQLLTNGTDLLVNYTY-R--IAF--EGGGGQDFGLAAAIATLIFLLVGALAI--------------
>4tqvB_w025 weight: 0.0659 score: 0.27804 eval: n/a prob: n/a identity: 0.1338 startpos: 10
----IFGIVNAVLLGIFALCALYPIIYIFSMSI-SSGAAVTQGRVFLLPVDIDFSAYGRVL--HDKLFWTSYANTIFYTVFGVVTSLIFIVPGAYALSKPRIRGRRVFGFIIAFTMWF--NAGMIPF---FLNMRDLGLLDN-RFGILIGFA--CNAFNIILMRNYFESISASFEEAARMDGANDLQILWKVYIPLAKPALATITLLCAISRWNGYFWAMVLLEEKIPLQVYLKKTLLTNSYSVGAIIVMSIIP-VIIVYPVVQKYFTKG--------------
>4ki0F_w023 weight: 0.0630 score: 0.26094 eval: n/a prob: n/a identity: 0.1373 startpos: 5
----KWSVLGLLGLLVGYVVLMITTLILSSAGLYIFANRKA----YAWRYVYWKNFTRVFTDEGIQPFLAIFVWTVVFSLITVFLTVAVGMVLACLVQWEALRGKAVYRVLLILPYFISILIFKGLFEINMMLSALFGVKTTARTMLIIVNTWLGYPYMMILCMGLLKAIPDDLYEASAMDGAGPFQNFFKITLPLLIKPLTPLMIASFAFNFNNFVLIQLLTNYTDLLVNYTY-RIAFEGGLAAAIATLI-----FLLVGALAIV------------------
>2r6gF_w019 weight: 0.0609 score: 0.21500 eval: n/a prob: n/a identity: 0.1303 startpos: 9
----GLLGLLVGYLVVLMYALFAITTLILSSAGYIFANRKA----YAWRYVYWKNFTRVFT---DEGIQAIFVWTVVFSLITVFLTVAVGMVLACLVQWEALRGKAVYRVLLILPYFISILIFKGLFPAWFS------DPTTARTMLIIVNTWLGYPYMMILCMGLLKAIPDDLYEASAMDGAGPFQNFFKITLPLLIKPLTPLMIASFAFNFNNFVLIQLLTGYTDLLVNYTY-RIAFEGGQDFGLAAAIATLIFLLVGALAIV-------------------
>4jbwH_w023 weight: 0.0602 score: 0.25029 eval: n/a prob: n/a identity: 0.1338 startpos: 4
----GLLGLLVGYLVVLMYAGEYLFAITTLILSSAGLYIFANRKAYAWRYVYPGMAGMNFRVFIQKPFLAIFVWTVVFSLITVFLTVAVGMVLACLVQWEALRGKAVYRVLLILPYFISILIFKGLFEINMMLSALFGVKTTARTMLIIVNTWLGYPYMMILCMGLLKAIPDDLYEASAMDGAGPFQNFFKITLPLLIKPLTPLMIASFAFNFNNFVLIQLLTNYTDLLVNYTYRIAFEGGGGQDGLAAAIATLIFLLVGALAIVNLKAT--------------
>3d31C_302 weight: 0.0051 score: 14.92 eval: n/a prob: n/a identity: 0.1338 startpos: 1
----PLTFVFSFLLLVLFLFIFLTLSNMIFEQITED----------------FSGLVKAAGN---RSVISSIFLSLYAGFLATLLALLLGAPTGYILARFDFPGKRLVESIIDVPVVVPHTVAGIALLTVFGsiGEPLefRDALPGIVVAMLFVSMPYLANSAREGFKSVDPRLENAARSLGAPLWKAFFFVTLPLSARYLLIGSVMTWARAISEFGAVVILAYYPMVGPTLIYDriSYGLSASRPIAVLLILVTLSIFLVIR---------------------
>2onkC_203 weight: 0.0044 score: 300.6 eval: 4e-43 prob: 100 identity: 0.1479 startpos: 1
-MRLLFSALLALLSSIILLFVLLPVAATVTLQ----L-------------FNFDEFLKAAS---DPAVWKVVLTTYYAALISTLIAVIFGTPLAYILARKSFPGKSVVEGIVDLPVVIPHTVAGIALLVVFGSSGlpLKFVDALPGIVVAMLFVSVPIYINQAKEGFASVDVRLEHVARTLGSSPLRVFFTVSLPLSVRHIVAGAIMSWARGISEFGAVVVIAYYPMIAPTLIYERYLsgLSAAMPVAAILILLSLAVFVALRIIVG-----------------
>2r6gG_202 weight: 0.0039 score: 224.88 eval: 3.7e-31 prob: 99.88 identity: 0.1620 startpos: 1
KSQKARLFITHLLLLLFIAAIMFPLLMVVAISLRQGNFA--T-GSLIPEQISWDHWKLALGFspPFPVLLWLWNSVKVAGISAIGIVALSTTCAYAFARMRFPGKATLLKGMLIFQMFPAVLSLVALYALFDRL----GelNTHGGVIFAYLG-GIALHVWTIKGYFETIDSSLEEAAALDGATPWQAFRLVLLPLSVPILAVVFILSFIAAITEVPVASLLLrnSYTLAVGMQQYLNPQNYLWGDFAAAAVMSALPITIVFLLAQRWLVNGL---TAGGVK--
>4tquN_204 weight: 0.0034 score: 284.4 eval: 2.4e-40 prob: 100 identity: 0.1162 startpos: 8
RSDRIFGIVNAVLLGIFALCALYPIIYIFSMSISSGAAVTQGRVFLLPVDIDFSAYGRVLH---DKLFWTSYANTIFYTVFGVVTSLIFIVPGAYALSKPRIRGRRVFGFIIAFTMWFNA--GMIPFFLNMRDL----GLLDNRFGILIGFAC--NAFNIILMRNYFESISASFEEAARMDGANDLQILWKVYIPLAKPALATITLLCAISRWNGYFWAMVLLreKIPLQVYLKKTIVdmETVVGAIIVMSIIPVIIVYPVVQKYFTK----------------
>2r6gG_307 weight: 0.0027 score: 12.11 eval: n/a prob: n/a identity: 0.1655 startpos: 1
KSQKARLFITHLLLLLFIAAIMFPLLMVVAISLRQGNFATGSLIPEQI---SWDHWKLALGFSvpFPVLLWLWNSVKVAGISAIGIVALSTTCAYAFARMRFPGKATLLKGMLIFQMFPAVLSLVALYALFDRLGEYIpiGLNTHGGVIFAYLGGIALHVWTIKGYFETIDSSLEEAAALDGATPWQAFRLVLLPLSVPILAVVFILSFIAAITevASLLLRDVNSYTLAVGmyLNPQNYlgDFAAAAVMspITIVFLLAQRWLVNGLTAGGVKG---------
>4tquN_308 weight: 0.0027 score: 11.43 eval: n/a prob: n/a identity: 0.1162 startpos: 8
RSDRIFGIVNAVLLGIFALCALYPIIYIFSMSISSGAAVTQGRVFLLPVDIDFSAYGRVLH---DKLFWTSYANTIFYTVFGVVTSLIFIVPGAYALSKPRIRGRRVFGFIIAFTMWFN------AGMIPFFLNMRDLGLLDNRFGILIGFAC--NAFNIILMRNYFESISASFEEAARMDGANDLQILWKVYIPLAKPALATITLLCAISRWNgwAMVLLRAEEKIPLQVYltIVDLNVnsMETVVGAIIVMSIIPVIIVYPVVQKYFTK-------------
>4tqvB_309 weight: 0.0026 score: 11.23 eval: n/a prob: n/a identity: 0.1162 startpos: 6
RSDRIFGIVNAVLLGIFALCALYPIIYIFSMSISSGAAVTQGRVFLLPVDIDFSAYGRVLH---DKLFWTSYANTIFYTVFGVVTSLIFIVPGAYALSKPRIRGRRVFGFIIAFTMWFN------AGMIPFFLNMRDLGLLDNRFGILIGF--ACNAFNIILMRNYFESISASFEEAARMDGANDLQILWKVYIPLAKPALATITLLCAISRWNgwAMVLLRAEEKIPLQVYltIVDLNVnsMETVVGAIIVMSIIPVIIVYPVVQKYFTKGVM----------
>4ymsD_303 weight: 0.0020 score: 12.77 eval: n/a prob: n/a identity: 0.1232 startpos: 1
-----------------------------------------------------MTVDFLSMVKYTPLFISGLIMTLKLTFLAVTIGVLMGLFIALMKMSSIKPIKLVASSYIEVIRGTPL----LVQLLLIYNGLMQFGMNIpfTAGVSALAINSSAYVAEIIRAGIQAVDPGQNEAARSLGMTHAMAMRYVIIPQAIKNILPALGNEFIVMLKESAIVSVIGFalTRQADIIQSVTYRYFEPYIIIAAIYFVMTLTFSKLLSLFERRLR--------------
>4ymtB_305 weight: 0.0017 score: 12.75 eval: n/a prob: n/a identity: 0.1127 startpos: 1
------------------------------------------------MTVDFLSM-----VKYTPLFISGLIMTLKLTFLAVTIGVLMGLFIALMKMSSIKPIKLVASSYIEVIRGTPLLVQLLLIYNGL----MQFGMNIpfTAGVSALAINSSAYVAEIIRAGIQAVDPGQNEAARSLGMTHAMAMRYVIIPQAIKNILPALGNEFIVMLKESAIVSVIGFalTRQADIIQSVTYRYFEPYIIIAAIYFVMTLTFSKLLSLFERRLR--------------
>4ymwC_306 weight: 0.0017 score: 12.73 eval: n/a prob: n/a identity: 0.1127 startpos: 1
-----------------------------------------------------MTVDFLSMVKYTPLFISGLIMTLKLTFLAVTIGVLMGLFIALMKMSSIKPIKLVASSYIEVIRGTPLLVQLLLIYNGL----MQFGMNIpfTAGVSALAINSSAYVAEIIRAGIQAVDPGQNEAARSLGMTHAMAMRYVIIPQAIKNILPALGNEFIVMLKESAIVSVIGFalTRQADIIQSVTYRYFEPYIIIAAIYFVMTLTFSKLLSLFERRL---------------
>4ymwD_304 weight: 0.0017 score: 12.75 eval: n/a prob: n/a identity: 0.1232 startpos: 1
-----------------------------------------------------MTVDFLSMVKYTPLFISGLIMTLKLTFLAVTIGVLMGLFIALMKMSSIKPIKLVASSYIEVIRGTP----LLVQLLLIYNGLMQFGMNIpfTAGVSALAINSSAYVAEIIRAGIQAVDPGQNEAARSLGMTHAMAMRYVIIPQAIKNILPALGNEFIVMLKESAIVSVIGFalTRQADIIQSVTYRYFEPYIIIAAIYFVMTLTFSKLLSLFERRLR--------------
>4ymsC_310 weight: 0.0014 score: 10.86 eval: n/a prob: n/a identity: 0.1232 startpos: 1
-----------------------------------------------------MTVDFLSMVKYTPLFISGLIMTLKLTFLAVTIGVLMGLFIALMKMSSIKPIKLVASSYIEVIRGTP----LLVQLLLIYNGLMQFGMNIpfTAGVSALAINSSAYVAEIIRAGIQAVDPGQNEAARSLGMTHAMAMRYVIIPQAIKNILPALGNEFIVMLKESAIVSVIGFalTRQADIIQSVTYRYFEPYIIIAAIYFVMTLTFSKLLSLFERRL---------------
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