SSGCID - MygeA.19062.a tRNA pseudouridine synthase A MG_182 Domain 1 Parse 1 Confidence: 0.98 Download Results Archive Download Domain Models

             1   .   10    .   20    .   30    .   40    .   50    .   60    .   70    .   80    .   90    .  100    .  110    .  120    .  130    .  140    .  150    .  160    .  170    .  180    .  190    .  200    .  210    .  220    .  230    .  240    
   sequence: MARYLGIVSYDGSYFKGWAIQPNLATIQGLLEQSFSLIIGRKIKVIGSGRTDKGVHAINQTFHVDINGEINLNLLIRKINQLIKPHCIVKTLVLVNDSFHARFQVKTKVYEYLINCGNLNPLQFNYVWQLNQQLDLEKLKADATLFLGKKNFLSFSSSIHTDSIRTISKITIQKETNQLVRLTFFGSGFLRSQVRMIVACLVNLNTNKMALETVAKLFEHPKKGSCVVKAPSCGLYLKTVVYEK
 deepconcnf: --EEEEEEEE-------EEE------HHHHHHHHHHHHH---EEEEEEE----------EEEEEEE-----HHHHHHHHHHH----EEEEEEEE--------------EEEEEEE----------EEEE------HHHHHHHHHHHH----------------EEEEEEEEEEEEE--EEEEEEE---HHHHHHHHHHHHHHHH------HHHHHHHH----------------EEEEEEE---
    psipred: --EEEEEEEE------EEEE------HHHHHHHHHHHHH--EEEEEEE----HHHHH---EEEEE------HHHHHHHHHHH-----EEEEEEEE------------EEEEEEEE-----HHH--EEEE------HHHHHHHHHH-------HHH---------EEEEEEEEEE----EEEEEEEE-EEHHHHHHHHHHHHHHHH-----HHHHHHHHHH--HHH----------EEEEEE---
    spider3: --EEEEEEEE-------EEE------HHHHHHHHHHHHH---EEEEEE-----------EEEEEE------HHHHHHHHHH-----EEEEEEEEE----------EEEEEEEEEE-----HHH--EEEEE-----HHHHHHHHHHH--EEEHHHH--------EEEEEEEEEEEE---EEEEEEEE---HHHHHHHHHHHHHHHH-----HHHHHHHHH---HHH---------EEEEEEEE--

>14473
MARYLGIVSYDGSYFKGWAIQPNLATIQGLLEQSFSLIIGRKIKVIGSGRTDKGVHAINQTFHVDINGEINLNLLIRKINQLIKPHCIVKTLVLVNDSFHARFQVKTKVYEYLINCGNLNPLQFNYVWQLNQQLDLEKLKADATLFLGKKNFLSFSSSIHTDSIRTISKITIQKETNQLVRLTFFGSGFLRSQVRMIVACLVNLNTNKMALETVAKLFEHPKKGSCVVKAPSCGLYLKTVVYEK
>2nqpA_201 weight: 0.3543 score: 577 eval: 1e-45 prob: 100 identity: 0.2541 startpos: 3
VYKIALGIEYDGSKYYGWQRQNEVRSVQEKLE-ALSQVANEPITVFCAGRTDAGVHGTGQVVHFETTALRKDAAWTLGVNANLPGDIAVRWVKTVPDDFHARFSATARRYRYIIYNhlRPAVLSKGVTHFYEPLDAERMHRAAQCLLGENDFTSFRAVQcrTPWRNVMHINVTRH-GPYVVVDIKANAFVHHMVRNIVGSLMEVGAHNQPESWIAELLAAKDRTLAAATAKAEGLYLVAVDYPD
>2nqpA_101 weight: 0.3032 score: 257.3 eval: 3.7e-11 prob: n/a identity: 0.2541 startpos: 3
VYKIALGIEYDGSKYYGWQRQNEVRSVQEKLE-ALSQVANEPITVFCAGRTDAGVHGTGQVVHFETTALRKDAAWTLGVNANLPGDIAVRWVKTVPDDFHARFSATARRYRYIIYNhlRPAVLSKGVTHFYEPLDAERMHRAAQCLLGENDFTSFRAVQC-tPWRNVMHINVTRHG-PYVVVDIKANAFVHHMVRNIVGSLMEVGAHNQPESWIAELLAAKDRTLAAATAKAEGLYLVAVDYPD
>1vs3A_301 weight: 0.2883 score: 49.6 eval: n/a prob: n/a identity: 0.3156 startpos: 1
MRRLLLLCEYDGTLFAGLQRQGrlRTVQGELERALPGIGALP-KAVAAGRTDAGVHALAMPFHVDVESAIPVEKVPEALNRLLPEDLKVVGAREVAPDFHARKDALWRAYRYRILVRppSPLLRHRALWVRRPLDLEAMEEALSLLLGRHNFLGFAKEETRPGERELLEARLQVAEglEVRLYFRGKSFLRGQVRGMVGTLLEVGLGKRPPESLKAILKTADRRLAGPTAPAHGLYFVEAAYPE
>1vs3A_102 weight: 0.0084 score: 255.5 eval: 4.4e-11 prob: n/a identity: 0.3156 startpos: 1
MRRLLLLCEYDGTLFAGLQRQggLRTVQGELERALPGIGAL-PKAVAAGRTDAGVHALAMPFHVDVESAIPVEKVPEALNRLLPEDLKVVGAREVAPDFHARKDALWRAYRYRILVrhPSPLLRHRALWVRRPLDLEAMEEALSLLLGRHNFLGFAKEETRPGERELLEARLQVAegLEVRLYFRGKSFLRGQVRGMVGTLLEVGLGKRPPESLKAILKTADRRLAGPTAPAHGLYFVEAAYPE
>1vs3A_202 weight: 0.0069 score: 467.94 eval: 1e-45 prob: 100 identity: 0.3156 startpos: 1
MRRLLLLCEYDGTLFAGLQRQGrlRTVQGELERALPGIGALP-KAVAAGRTDAGVHALAMPFHVDVESAIPVEKVPEALNRLLPEDLKVVGAREVAPDFHARKDALWRAYRYRILVrhPSPLLRHRALWVRRPLDLEAMEEALSLLLGRHNFLGFAKEETRPGERELLEARLQVA-elEVRLYFRGKSFLRGQVRGMVGTLLEVGLGKRPPESLKAILKTADRRLAGPTAPAHGLYFVEAAYPE
>2nqpA_302 weight: 0.0068 score: 47.14 eval: n/a prob: n/a identity: 0.2541 startpos: 3
VYKIALGIEYDGSKYYGWQRQNEVRSVQEKLE-ALSQVANEPITVFCAGRTDAGVHGTGQVVHFETTALRKDAAWTLGVNANLPGDIAVRWVKTVPDDFHARFSATARRYRYIIYNHrrPAVLSKGVTHFYEPLDAERMHRAAQCLLGENDFTSFRAVqsRTPWRNVMHINVTRHG-PYVVVDIKANAFVHHMVRNIVGSLMEVGAHNQPESWIAELLAAKDRTLAAATAKAEGLYLVAVDYPD
>4nz6A_103 weight: 0.0051 score: 218.4 eval: 1.8e-09 prob: n/a identity: 0.2131 startpos: 1
KRKIVLLMAYSGKGYHGMQR--QFKTIEDDLVSALVRS-mRKMSFQRCARTDKGVSAAGQVVSLKVWL---IDDILEKINSHLPSHIRILGLKRVTGGFNSKNRCDARTYCYLLPTFAFAHkvQDETYRLS-AETLQQVNRLLACYKGTHNFHNFTSQkdPSACRYILEMYCEEPFveFAVIRVKGQSFMMHQIRKMVGLVVAIVKGYAPESVLERSWGTEKV--DVPKAPGLGLVLERVHFEK
>4iqmA_104 weight: 0.0035 score: 217 eval: 2.1e-09 prob: n/a identity: 0.2131 startpos: 3
KRKIVLLMAYSGKGYHGMQRN--FKTIEDDLVSALVRSG-rKMSFQRCARTDKGVSAAGQVVSLKVWL---IDDILEKINSHLPSHIRILGLKRVTGGFNSKNRCDARTYCYLLPTFAFAHkvQDETYRLS-AETLQQVNRLLACYKGTHNFHNFTSQkdPSACRYILEMYCEEP-lEFAVIRVKGQSFMMHQIRKMVGLVVAIVKGYAPESVLERSWGTEKV--DVPKAPGLGLVLERVHFEK
>4nz6A_303 weight: 0.0035 score: 31.47 eval: n/a prob: n/a identity: 0.2172 startpos: 1
KRKIVLLMAYSGKGYHGMQRQF--KTIEDDLVSALVRsdMRKMSFQRCARTDKGVSAAGQVVSLKVWLI---DDILEKINSHLPSHIRILGLKRVTGGFNSKNRCDARTYCYLLPT-FAFAHKDRDVQDETYRLslQQVNRLLACYKGTHNFHNFTspQDPSACRYILEMYcfVREgeFAVIRVKGQSFMMHQIRKMVGLVVAIVKGYAPESVLERSW--GTEKVDVPKAPGLGLVLERVHFEK
>4nz6B_105 weight: 0.0027 score: 217 eval: 2.1e-09 prob: n/a identity: 0.2131 startpos: 2
KRKIVLLMAYSGKGYHGMQRN-QFKTIEDDLVSALVRSG-rKMSFQRCARTDKGVSAAGQVVSLKVWL---IDDILEKINSHLPSHIRILGLKRVTGGFNSKNRCDARTYCYLLPTFAFAHkvQDETYRLSAE-TLQQVNRLLACYKGTHNFHNFTSQkdPSACRYILEMYCEEPFveFAVIRVKGQSFMMHQIRKMVGLVVAIVKGYAPESVLERSWGTEKV--DVPKAPGLGLVLERVHFEK
>4nz7A_106 weight: 0.0023 score: 210.7 eval: 4e-09 prob: n/a identity: 0.2131 startpos: 1
KRKIVLLMAYSGKGYHGMQ---QFKTIEDDLVSALVRS-mRKMSFQRCARTAKGVSAAGQVVSLKVWL---IDDILEKINSHLPSHIRILGLKRVTGGFNSKNRCDARTYCYLLPTF-AFAHKDRDVQDETYRltLQQVNRLLACYKGTHNFHNFTSQkdPSACRYILEMYCEEPFveFAVIRVKGQSFMMHQIRKMVGLVVAIVKGYAPESVLERSWGTEKV--DVPKAPGLGLVLERVHFEK
>4j37A_304 weight: 0.0022 score: 31.19 eval: n/a prob: n/a identity: 0.2049 startpos: 3
KRKIVLLMAYSGKGYHGMQRNQFK-TIEDDLVSALVRsdMRKMSFQRCARTDKGVSAAGQVVSLKVWL---IDDILEKINSHLPSHIRILGLKRVTGGFN---RCDARTYCYLLPtdRD---VQDETYRLS-AETLQQVNRLLACYKGTHNFHNFTSQKgpSACRYILEMYCefVREgfAVIRVKGQSFMMHQIRKMVGLVVAIVKGYAPESVLERSW--GTEKVDVPKAPGLGLVLERVHFEP
>4j37A_107 weight: 0.0021 score: 209.8 eval: 4.4e-09 prob: n/a identity: 0.2049 startpos: 3
KRKIVLLMAYSGKGYHGMQRN-QFKTIEDDLVSALVRSG-rKMSFQRCARTDKGVSAAGQVVSLKVWL---IDDILEKINSHLPSHIRILGLKRVTGGFN---RCDARTYCYLLPTFAFAHkvQDETYRLS-AETLQQVNRLLACYKGTHNFHNFTSqqDPSACRYILEMYCEEPFveFAVIRVKGQSFMMHQIRKMVGLVVAIVKGYAPESVLERSWGTE--KVDVPKAPGLGLVLERVHFE-
>2v9kA_109 weight: 0.0020 score: 105.1 eval: 0.00016 prob: n/a identity: 0.1352 startpos: 224
HGAVFVAGRYNKYSRNLPQTPwlESSVEELISDHLLAVFKasFNFSSSGREDVDVRTlgRPFAIELVNP-eIKELQQKINNS-SNKIQVRDLQLVTREAIGHMKekTKTYSALIWTN--------------KAIQKKDIEFLNDIKDLKIDQKTPLRVllAVRARVIHFMETQYVDEHHFRLHLKTQAG------TYIKEFVHGDFGRTKP-NIGSLMNV--------TADILELDVESVDVDW
>4itsA_108 weight: 0.0020 score: 206.3 eval: 6.2e-09 prob: n/a identity: 0.2008 startpos: 3
KRKIVLLMAYSGKGYHGMQR--QFKTIEDDLVSALVRSG-rKMSFQRCARTDKGVSAAGQVVSLKVWL---IDDILEKINSHLPSHIRILGLKRVTGGFN----CDARTYCYLLPTFAFAHkvQDETYRLSA-ETLQQVNRLLACYKGTHNFHNFTSqqDPSACRYILEMYCEEPFveFAVIRVKGQSFMMHQIRKMVGLVVAIVKGYAPESVLERSWGTE--KVDVPKAPGLGLVLERVHFPL
>4nz6B_305 weight: 0.0016 score: 31.13 eval: n/a prob: n/a identity: 0.2131 startpos: 2
KRKIVLLMAYSGKGYHGMQRNQFK-TIEDDLVSALVRsdMRKMSFQRCARTDKGVSAAGQVVSLKVW---LIDDILEKINSHLPSHIRILGLKRVTGGFNSKNRCDARTYCYLLPT-FAFAHKDRDVQDETYRLslQQVNRLLACYKGTHNFHNFTspQDPSACRYILEMYCefVREgfAVIRVKGQSFMMHQIRKMVGLVVAIVKGYAPESVLERSW--GTEKVDVPKAPGLGLVLERVHFEK
>4nz7A_306 weight: 0.0014 score: 30.78 eval: n/a prob: n/a identity: 0.2090 startpos: 1
KRKIVLLMAYSGKGYHGMQQFK---TIEDDLVSALVRsdMRKMSFQRCARTAKGVSAAGQVVSLKVW---LIDDILEKINSHLPSHIRILGLKRVTGGFNSKNRCDARTYCYLLPT-FAFAHKDRDVQDETYRLslQQVNRLLACYKGTHNFHNFTspQDPSACRYILEMYCefVREgfAVIRVKGQSFMMHQIRKMVGLVVAIVKGYAPESVLERSW--GTEKVDVPKAPGLGLVLERVHFEK
>4itsA_307 weight: 0.0013 score: 30.61 eval: n/a prob: n/a identity: 0.2049 startpos: 3
KRKIVLLMAYSGKGYHGMQRQF--KTIEDDLVSALVRsdMRKMSFQRCARTDKGVSAAGQVVSLKVWL---IDDILEKINSHLPSHIRILGLKRVTGGFNC----DARTYCYLLPtdRD---VQDETYRLS-AETLQQVNRLLACYKGTHNFHNFTSQKgpSACRYILEMYCefVREgfAVIRVKGQSFMMHQIRKMVGLVVAIVKGYAPESVLERSW--GTEKVDVPKAPGLGLVLERVHFPL
>2v9kA_309 weight: 0.0012 score: 5.58 eval: n/a prob: n/a identity: 0.1066 startpos: 224
HGAVFVAGRYNKYSRNLPQTpkLESSVEELISDHLLAVFkeSFNFSSSGREDVDVRTLgfAIELVNPHRVHfkELQQKINN----------------------SSNKIQVRDLQLVTRekTKTYSALIWTNKAIQKKDIEFLNDIKDLkkTPLRVLHRRPLarARVIHFMETQYVDEHHFRLHLKTQAGTY------IKEFVHGDFGRTKP-NIGSLMNVT--------ADILELDVESVDVDW
>4iqmA_308 weight: 0.0012 score: 30.24 eval: n/a prob: n/a identity: 0.2131 startpos: 3
KRKIVLLMAYSGKGYHGMQR--NFKTIEDDLVSALVRsdMRKMSFQRCARTDKGVSAAGQVVSLKVWL---IDDILEKINSHLPSHIRILGLKRVTGGFNSKNRCDARTYCYLLPtdRD---VQDETYRLS-AETLQQVNRLLACYKGTHNFHNFTspQDPSACRYILEMYcfVREGlfAVIRVKGQSFMMHQIRKMVGLVVAIVKGYAPESVLERSW--GTEKVDVPKAPGLGLVLERVHFEK

Powered by MSAViewer

Baker Lab | Rosetta@home | Contact | Terms of Service
©2025 University of Washington