T0953s2 Domain 2 Parse 1 Confidence: 0.41

Job ID	Status	Method	Username	Target	Length	Date (PST)	Expiration Date (PST)
141	Complete	Structure prediction	casp	T0953s2	249	4 May 2018	-

Domain ID	Domain	Parse	Confidence	Modeling Method	Model Span	Length	Date (PST)
212	2	1	0.41	comparative modeling	45-147	103	5 May 2018

                 50    .   60    .   70    .   80    .   90    .  100    .  110    .  120    .  130    .  140    .  
   sequence: KEEIWEWTGENHSFNKDWLIGELRNRGGTPVVINIRAHQVSYTPGAPLFEFPGDLPNAYITLNIYADIYGRGGTGGVAYLGGNPGGDCIHNWIGNRLRINNQG
 deepconcnf: --EEEEEE----EEEHHHHH----------EEEEE--EEEE-----------------EEEEEE--EEEE-----------------EEE-----EEEEE---
    psipred: --EEEEEE-----EEHHHHH---------EEEEEEEEEEEE-------EE--------EEEEEE--EEE------------------EEEE---EEEEE----
    spider3: --EEEEEE-----EEHHHHH----------EEEEE--EEEE-------EE--------EEEEEE--EEEE-----------------EEEEE--EEEEEE---

View

GREMLIN (Neff(80%)/√Len: 127.5)

Alignment

>212
KEEIWEWTGENHSFNKDWLIGELRNRGGTPVVINIRAHQVSYTPGAPLFEFPGDLPNAYITLNIYADIYGRGGTGGVAYLGGNPGGDCIHNWIGNRLRINNQG
>5hnnA_w043 weight: 0.2620 score: 0.00300 eval: n/a prob: n/a identity: 0.0777 startpos: 27
-----------YTYPAASDFSYFAGKGMNTIRLPFLWERVQPENGPLDIKLEAAKAKQYLILDLHNYATYSGKRIGTSDVPAGALADLWEFKDDKAVIFG---
>1vjzA_w043 weight: 0.2549 score: 0.00238 eval: n/a prob: n/a identity: 0.0874 startpos: 19
-----------GNF-KEEDFLWMAQWDFNFVRIPMCHLLWSGNPFIIRIDIFWGEKGIHICISLHRAPGYEKTNLWKDETAQEAFIHHWRYKGITHLSFN---
>3cuiA_w041 weight: 0.2547 score: 0.00159 eval: n/a prob: n/a identity: 0.0777 startpos: 172
-----------NVESLYDLVKDFKARGLDCVGFQS---HLIVGQVPGDFRLQRFALGVDVRIT-ELDIRMRTPSDATKLATQAADYKKVACQVTRCQGVT---
>1fhlA_w042 weight: 0.2285 score: 0.00168 eval: n/a prob: n/a identity: 0.0097 startpos: 185
-----------SWDQQNYFYETVLATDFDYFGVSY--YPFYSASATLSLKLANLQSTYPVVVVETNWFPSDLSSIPFSVAGQQEFLEKLVVEATTDGLGV---

Alignment cluster 1 [ RosettaCM constraints ]

>212
KEEIWEWTGENHSFNKDWLIGELRNRGGTPVVINIRAHQVSYTPGAPLFEFPGDLPNAYITLNIYADIYGRGGTGGVAYLGGNPGGDCIHNWIGNRLRINNQG
>5nxkC_301 weight: 0.4189 score: 5.35 eval: n/a prob: n/a identity: 0.1262 startpos: 39
GNRNITIIGDGHYINALngIILNNRGGSAKIDLTIENATLYNTSKYGFVNMSS---NGVDTVTYkvTAYGGTLVWSKTG----AGVKTLNLVGNTTLNSVKSY
>5ny0A_102 weight: 0.4089 score: 44.74 eval: 0.0006 prob: n/a identity: 0.0874 startpos: 44
VSRDVTIYGNGKYINATdgGIFIHNTKSYTVNLTIEKATLYNQSQYGFVHMND---EGTDNITYK-NITAYG-------------GTLVWSqgTKTLSLEGTV
>1idjA_306 weight: 0.0262 score: 4.84 eval: n/a prob: n/a identity: 0.0874 startpos: 132
AENIIIQNIAVTDINPKYVWGGDAITLDDCDLVWIDHVTTARIG-RQHYVLGTSA--DNRVSLTNNYIDGVSDYSATCDGYHYWGIYLDGDADLVTMKGNYIY
>5gkqA_106 weight: 0.0261 score: 42.32 eval: 0.00095 prob: n/a identity: 0.0874 startpos: 481
KTLTIRAQ-gSAVIFPQrtLIEINN----KGNLTLDGVYVDAT-gNTLIRTTRlmQRNYRLAIKNSTFENLD---------INHSYHFFDasFADYIEVQDSQ
>5nxkA_104 weight: 0.0208 score: 42.92 eval: 0.00084 prob: n/a identity: 0.1165 startpos: 39
GNRNITIIGDGHYINAlgGIILNNRGGSAKIDLTIENATLYNTSKYGFVNMSS-NGVDTVTYKDV-TAYGGTLVWS-----tGAGVKTLNLVGNTTLNSVKSY
>1rmgA_103 weight: 0.0205 score: 43 eval: 0.00083 prob: n/a identity: 0.0777 startpos: 51
--GLVYIP--SGNYALN---TWVTLTGGSATAIQLDGIIYRTGTagNMIAVT---DTTDFELFskGAVQGFGYVYH---AEGTYGARILRLTDVTHFSVHDII
>5nxkC_105 weight: 0.0190 score: 42.69 eval: 0.00088 prob: n/a identity: 0.1165 startpos: 39
GNRNITIIGDGHYINAlgGIILNNRGGSAKIDLTIENATLYNTSKYGFVNMSS--gVDTVTYKDV-TAYGGTLVWSKTG----AGVKTLNLVGNTTLNSVKSY
>3vmvA_107 weight: 0.0169 score: 42.22 eval: 0.00096 prob: n/a identity: 0.0971 startpos: 77
KNISIIGVGTNGEFDGIGIRLS------NAHNIIIQNVSIHHVreGTAIEVTD---DSKNVWIDHNEFYSEF--PGNGDSDYYDGLVDMKR-NAEYITVSWNK
>3wwgC_109 weight: 0.0144 score: 41.68 eval: 0.0011 prob: n/a identity: 0.0971 startpos: 284
-----------------------------SQTFVLNGVTVSAPP-FNSMDWSGnlDLITCRVDDY-KQVGAFYG----------QTDGLEMYPGTILQDVFYH
>3wwgB_110 weight: 0.0142 score: 41.43 eval: 0.0011 prob: n/a identity: 0.0971 startpos: 289
------------------------------QTFVLNGVTVSAPP-FNSMDWSGnlDLITCRVDDYKQVGAFYG-----------QTDGLEMYPGTILQDVFYH
>3wwgD_108 weight: 0.0142 score: 41.74 eval: 0.0011 prob: n/a identity: 0.0971 startpos: 288
------------------------------QTFVLNGVTVSAPP-FNSMDWSGnlDLITCRVDDYKQVGAFYG-----------QTDGLEMYPGTILQDVFYH

Alignment cluster 2 [ RosettaCM constraints ]

>212
KEEIWEWTGENHSFNKDWLIGELRNRGGTPVVINIRAHQVSYTPGAPLFEFPGDLPNAYITLNIYADIYGRGGTGGVAYLGGNPGGDCIHNWIGNRLRINNQG
>3zgiB_309 weight: 1.0000 score: 4.64 eval: n/a prob: n/a identity: 0.0971 startpos: 8
KVYTGEGVDSVYRVPIYYKLKVTNDGSKLTFTYTVtsIYNSGTSTQTMLTLggKPSGVKNYITDkgYTWGNGAqnGFFAKKGY--GLTSSWTVPisFTFTPYA

Alignment cluster 3 [ RosettaCM constraints ]

T0953s2 Domain 2 Parse 1 Confidence: 0.41 Download Results Archive Download Domain Models

T0953s2 Domain 2 Parse 1 Confidence: 0.41