T1048 Domain 1 Parse 1 Confidence: 0.40

Job ID	Status	Method	Username	Target	Length	Date (PST)	Expiration Date (PST)
28827	Complete	Structure prediction	casp	T1048	109	9 Jun 2020	-

Domain ID	Domain	Parse	Confidence	Modeling Method	Model Span	Length	Date (PST)
28214	1	1	0.40	comparative modeling	9-109	101	9 Jun 2020

             10    .   20    .   30    .   40    .   50    .   60    .   70    .   80    .   90    .  100    .    
   sequence: SHMKGNIQQQIQLKSELASAEAKMEEQKQQLERHFEQSANLLENMAEDYKKLYTHFAQNSEQLLPESNQVEFFKRLKNHANGDEDNQPRDYSDGSSGLLKS
    psipred: ----HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH--------------------------------------
    spider3: ------HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH---HHHHHHHHHHHH------------------------
 deepconcnf: ------HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH------HHHHHHHH------------------------

View

GREMLIN (Neff(80%)/√Len: 42.0)

Alignment

>28214
SHMKGNIQQQIQLKSELASAEAKMEEQKQQLERHFEQSANLLENMAEDYKKLYTHFAQNSEQLLPESNQVEFFKRLKNHANGDEDNQPRDYSDGSSGLLKS
>2pmsD_302 weight: 0.3249 score: 6.29 eval: n/a prob: n/a identity: 0.1287 startpos: 6
AEEVAPQAKIAELENQVHRLEQELKEilQSKLDAKKAKLSKLEELSDKIDELDAEIAKLEDQLKaeDYFKEGLEKTIAAKKAELEKTEADLKKAVNE----
>4ut1A_201 weight: 0.3022 score: 22.73 eval: 830 prob: 33.26 identity: 0.1188 startpos: 61
----TAMSNAQTLASQLVAAGQQYSQLRQSVNSQLTDTVTQINSYTSQIAQLNEQIASapNQLLDQRD--LAVSKLSQLAGVQVVQ---------------
>4aurA_101 weight: 0.2615 score: 62.36 eval: 0.023 prob: n/a identity: 0.0693 startpos: 267
--------GMDVVKDIVIQRVTLASRHLDELNTFVEKNDEDMHRFSNDIKQSRIEVKRLAGELFEE-----------------------------------
>4l8iA_304 weight: 0.0167 score: 6.12 eval: n/a prob: n/a identity: 0.0891 startpos: 8
DLEERFDKLVEALKNKVDKMKAAfqFHEERMKDWFKDLRKEVEQMRRAVRNYASEALSKINDLPItkLASNDVLKLVAEVWKKLEAILADVEAWFTHHHH-
>2pmsC_305 weight: 0.0143 score: 6.09 eval: n/a prob: n/a identity: 0.1287 startpos: 1
--GSHMDAEEVAPQAKIAELENQVHRLEQEllDAKKAKLSKLEELSDKIDELDAEIAKLEDQLKAAEEEDYFKEGLEKTIAAKKAELEKTEADLKKAVNE-
>2nrjA_102 weight: 0.0112 score: 62.24 eval: 0.023 prob: n/a identity: 0.0594 startpos: 116
--------DGETLKEGITDLRGEIQQNQKYAQQLIEELTKLRDSIGHDVRAFGSNKELLQSILK-------------------------------------
>3mxzA_309 weight: 0.0094 score: 5.88 eval: n/a prob: n/a identity: 0.1188 startpos: 13
STCKRIVKELHSYEKEVEREAAKTADMKdqQENVLGESRMMIPDCHKRLESALADLKSTLAELEETEKEGPEIEDAKKTVADVEKQ---------------
>4k1pD_103 weight: 0.0089 score: 61.85 eval: 0.024 prob: n/a identity: 0.0495 startpos: 105
-------QSKADFTNAYGKLQLQVQSIQENMEQDLLELNRFKTVLDKDSNNLSIKADEAIKTLQ-------------------------------------
>4tqlA_104 weight: 0.0078 score: 61.83 eval: 0.024 prob: n/a identity: 0.0792 startpos: 74
--------DKQKMEELLKRAKEEMKKVKDKMEKLLEKLKQIMQEAKQKMEKLLKQLKEEMKKMKE------------------------------------
>6h2fE_105 weight: 0.0071 score: 61.77 eval: 0.024 prob: n/a identity: 0.0693 startpos: 98
--------TKAQWLRQLSVIKEQATEYQRLSSDTRLVIVNLNNNLITDSSNFQGIVVNLNSKVQ-------------------------------------
>6grjE_107 weight: 0.0068 score: 61.68 eval: 0.024 prob: n/a identity: 0.0693 startpos: 98
--------TKAQWLRQLSVIKEQATEYQRLSSDTRLVIVNLNNNLITDSSNFQGIVVNLNSKVQ-------------------------------------
>6h2fA_106 weight: 0.0068 score: 61.73 eval: 0.024 prob: n/a identity: 0.0693 startpos: 98
--------TKAQWLRQLSVIKEQATEYQRLSSDTRLVIVNLNNNLITDSSNFQGIVVNLNSKVQ-------------------------------------
>6grjA_109 weight: 0.0065 score: 61.34 eval: 0.025 prob: n/a identity: 0.0693 startpos: 98
--------TKAQWLRQLSVIKEQATEYQRLSSDTRLVIVNLNNNLITDSSNFQGIVVNLNSKVQ-------------------------------------
>6grkA_110 weight: 0.0061 score: 61.3 eval: 0.025 prob: n/a identity: 0.0693 startpos: 93
--------TKAQWLRQLSVIKEQATEYQRLSSDTRLVIVNLNNNLITDSSNFQGIVVNLNSKVQ-------------------------------------
>4k1pC_108 weight: 0.0060 score: 61.49 eval: 0.025 prob: n/a identity: 0.0396 startpos: 89
---------KADFTNAYGKLQLQVQSIQENMEQDLLELNRFKTVLDKDSNNLSIKADEAIKTLQG------------------------------------
>4wy4B_203 weight: 0.0039 score: 22.49 eval: 16 prob: 84.87 identity: 0.0297 startpos: 3
-------------WETLEADLIELSQLVTDFSLLVNSQQEKIDSIADHVNSAAVNVEEGTKNLGKAAK---------------------------------

Alignment cluster 1 [ RosettaCM constraints ]

>28214
SHMKGNIQQQIQLKSELASAEAKMEEQKQQLERHFEQSANLLENMAEDYKKLYTHFAQNSEQLLPESNQVEFFKRLKNHANGDEDNQPRDYSDGSSGLLKS
>3pq5A_w000 weight: 1.0000 score: 0.00000 eval: n/a prob: n/a identity: 0.0495 startpos: 491
------FEQRHIVDGFSFELSVRPYIRERVVDQLAHIDLTLAQAVAKNLG-IE--LTDDQLNISADLLAILKALKAKGVHAKLLYSRMGEVTADDGTVLPI

Alignment cluster 2 [ RosettaCM constraints ]

>28214
SHMKGNIQQQIQLKSELASAEAKMEEQKQQLERHFEQSANLLENMAEDYKKLYTHFAQNSEQLLPESNQVEFFKRLKNHANGDEDNQPRDYSDGSSGLLKS
>1i08A_w000 weight: 1.0000 score: 0.00000 eval: n/a prob: n/a identity: 0.1386 startpos: 21
------QTMEIHHTKAHQTYVNNANAALESLPEFANLPVELITKLDQLPADKKTVLRNN---AGGHANHSLFWKGLKKGTTLQGDLKAAIERDFGSVKLAV

Alignment cluster 3 [ RosettaCM constraints ]

>28214
SHMKGNIQQQIQLKSELASAEAKMEEQKQQLERHFEQSANLLENMAEDYKKLYTHFAQNSEQLLPESNQVEFFKRLKNHANGDEDNQPRDYSDGSSGLLKS
>4otoB_w000 weight: 1.0000 score: 0.00000 eval: n/a prob: n/a identity: 0.1089 startpos: 194
------LTPQQVVAIASNGGGKQALETVQRLLPVLCQAHGLVVAIAGGKQALETVQRLLPVLCTPQQVVAIASNWGGKQALETVQRLLPVLCQAHGLTPQQ

Alignment cluster 4 [ RosettaCM constraints ]

>28214
SHMKGNIQQQIQLKSELASAEAKMEEQKQQLERHFEQSANLLENMAEDYKKLYTHFAQNSEQLLPESNQVEFFKRLKNHANGDEDNQPRDYSDGSSGLLKS
>101mA_w000 weight: 1.0000 score: 0.00000 eval: n/a prob: n/a identity: 0.0693 startpos: 5
------EGEWQLVLHVWAKVEADVAGHG--QDILIRLFKTLVKHLEAEMKASEDLKKHGVTVLPLAQSHATKHKIPIKYLEFISEAIIHVLFGADAQAMNK

Alignment cluster 5 [ RosettaCM constraints ]

T1048 Domain 1 Parse 1 Confidence: 0.40 Download Results Archive Download Domain Models

T1048 Domain 1 Parse 1 Confidence: 0.40