SSGCID - LpinA.00107.a Heavy metal efflux pump Domain 2 Parse 1 Confidence: 0.89
| Job ID | Status | Method | Username | Target | Length | Date (PST) | Expiration Date (PST) |
|---|
| 2677 | Complete | Structure prediction | ssgcid | SSGCID - LpinA.00107.a He... | 333 | 9 Apr 2019 | - |
| Domain ID | Domain | Parse | Confidence | Modeling Method | Model Span | Length | Date (PST) |
|---|
| 2859 | 2 | 1 | 0.89 | comparative modeling | 41-333 | 293 | 11 Apr 2019 |
. 50 . 60 . 70 . 80 . 90 . 100 . 110 . 120 . 130 . 140 . 150 . 160 . 170 . 180 . 190 . 200 . 210 . 220 . 230 . 240 . 250 . 260 . 270 . 280 . 290 . 300 . 310 . 320 . 330
sequence: PSKPIISENGEKIEFKENSPGLEIIQTKEIGKDGEFINVDAPARLIASTSPSVSGGERIILFESAELNDLYVGYVHSRNSLVRSIKNFERITDMFKHRVATEKDLIEAETQRNNDQAELAEFEGKLRAVGLNPALLGKSGAQSAWIISDVPESQLSKLKKGKRVKVRFSSFPNEEWSGTAEALGDNVDPMTRTVKVRIVISNAGYKLKPGMFANVKFPEDTANDTVVVPFNAIVTVEGQNYVFVEEAPHEFVRREVTLGISTTDRVNVIEGLTKGDRVVVQGSILLKGLSFGF
deepconcnf: ------EE---EEEE---------EEEEEEEE-----EEEEEEEEEEEE----E--EEEEEEE-HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH-----HHHHHHHHHHHHHHHHHHHHHHHHHHH-------EEEEE--EEEEEEEE------------EEEEEEE-----EEEEEEEEEE--E-----EEEEEEEEE----------EEEEEEE------EEEEE---EEEE--EEEEEEEEE--EEEEEEEEEEEEE--EEEE--------EEEEE--EEE-------
psipred: -----------EEEE-HHHHHH---EEEEEEEE----EEEEEEEEEEE---------EEEEEE-HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH----HHHHHHHHHHHHHHHHHHHHHHHHHHHH-------EEEE---EEEEEEEE-HHHHHH-----EEEEEE------EEEEEEEEE---------EEEEEEEEE----------EEEEEEE-------EE--HHH-EEE--EEEEEEE----EEEEEEEEE------EEEE--------EEEE--EEEEEHHH---
spider3: -----------EEEE---------EEEEEEEE-----EEEEEEEEEEEE--------EEEEEE-HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH-----HHHHHHHHHHHHHHHHHHHHHHHHHHHH---HHHEEEE---EEEEEEEE-HHHHHH-----EEEEEE-------EEEEEEEE---------EEEEEEEEE-----E----EEEEEEE------EEEEEHHHEEEE--EEEEEEE-----EEEEEEEEEEE---EEEEEE------EEEEE-EEEE--HH---
>2859
PSKPIISENGEKIEFKENSPGLEIIQTKEIGKDGEFINVDAPARLIASTSPSVSGGERIILFESAELNDLYVGYVHSRNSLVRSIKNFERITDMFKHRVATEKDLIEAETQRNNDQAELAEFEGKLRAVGLNPALLGKSGAQSAWIISDVPESQLSKLKKGKRVKVRFSSFPNEEWSGTAEALGDNVDPMTRTVKVRIVISNAGYKLKPGMFANVKFPEDTANDTVVVPFNAIVTVEGQNYVFVEEAPHEFVRREVTLGISTTDRVNVIEGLTKGDRVVVQGSILLKGLSFGF
>3lnnA_201 weight: 0.3598 score: 329.61 eval: 4.8e-43 prob: 100 identity: 0.2355 startpos: 1
--ALRHEGERLVVPAESPLRRT--LAVAPATRETVAAPFNLPAMIEAdvlGDEvaGDVLFTIDSADLAQANSDAAKARAAMTMARRNLDRQRELDKSEIAAKRDFEQAQSDYDQAASESQRADARLAQLgdtaSLMTVADLSHVFVTANAQEKDLGHVYVGQSATVKFDAYDD-PQPGKVRYVGQILDADTRTTKVRMVFDNPDGRLRPGMFAQATFLSQ-PHEGIVVPMSAIVQSGFYTRAFVEVAPWQFEPRVIKLGAQIGDRMEVKSGLSAGDRVVVKEGVLLND-----
>3lnnA_101 weight: 0.3238 score: 227.2 eval: 1.2e-07 prob: n/a identity: 0.2526 startpos: 1
----ALRHEGERLVVPAESPLRRTLAVAPATRETVAAPFNLPAMIEADP-dEVKAGDVLFTIDSADLAQANSDAAKARAAMTMARRNLDRQRELDKSEIAAKRDFEQAQSDYDQAASESQRADARLAQLG-tASLMTVADLSHVFVTANAQEKDLGHVYVGQSATVKFDAY-DDPQPGKVRYVGQILDADTRTTKVRMVFDNPDGRLRPGMFAQATFLSQ-PHEGIVVPMSAIVQSGFYTRAFVEVAPWQFEPRVIKLGAQIGDRMEVKSGLSAGDRVVVKEGVLLND-----
>3lnnA_301 weight: 0.3164 score: 25.26 eval: n/a prob: n/a identity: 0.2491 startpos: 1
----ALRHEGERLVVPAESPLRRTLAVAPATRETVAAPFNLPAMIEAdvlgDEVkgDVLFTIDSADLAQANSDAAKARAAMTMARRNLDRQRELDKSEIAAKRDFEQAQSDYDQAASESQRADARLAQLgaaaSLMTVADLSHVFVTANAQEKDLGHVYVGQSATVKFDAYDDP-QPGKVRYVGQILDADTRTTKVRMVFDNPDGRLRPGMFAQATFLSQP-HEGIVVPMSAIVQSGFYTRAFVEVAPWQFEPRVIKLGAQIGDRMEVKSGLSAGDRVVVKEGVLLND-----
>2859
PSKPIISENGEKIEFKENSPGLEIIQTKEIGKDGEFINVDAPARLIASTSPSVSGGERIILFESAELNDLYVGYVHSRNSLVRSIKNFERITDMFKHRVATEKDLIEAETQRNNDQAELAEFEGKLRAVGLNPALLGKSGAQSAWIISDVPESQLSKLKKGKRVKVRFSSFPNEEWSGTAEALGDNVDPMTRTVKVRIVISNAGYKLKPGMFANVKFPEDTANDTVVVPFNAIVTVEGQNYVFVEEAPHEFVRREVTLGISTTDRVNVIEGLTKGDRVVVQGSILLKGLSFGF
>3ne5B_102 weight: 0.4592 score: 202.8 eval: 8.1e-07 prob: n/a identity: 0.1638 startpos: 3
-----------GVRIDPTQTQNLGVKTATVTRGPLTFAQSFPANVSYNE-dKVQKGTPLLDLTIPDWVEAQSEYLLLRETGGTATQTEGILERLRLAGMP-----EADIRRLIATQKIQTRFtgVITAFDL-nVVAKIQGMDPVWVTAAIPESIAWLVKDASQFTLTVPARPDKTLTIRKWTLLPGVDAATRTLQLRLEVDNADEALKPGMNAWLQLNTAS-EPMLLIPSQALIDTGSEQRVITVDADGRFVPKRVAVFQASQGVTALRSGLAEGEKVVSSGLFLIDSEANIS
>3ne5B_302 weight: 0.3922 score: 21.39 eval: n/a prob: n/a identity: 0.1570 startpos: 1
---------ASGVRIDPTQTQNLGVKTATVTRGPLTFAQSFPANVSYnvqgDKVqgTPLLDLTIPDWVEAQSEYLLLRET------------------GGTATQTEGILERLRLaeADIRRLIAtiTAFDLRavVAKIQGMDPVWVTAAIPESIAWLVKDASQFTLTVPARPDKTLTIRKWTLLPGVDAATRTLQLRLEVDNADEALKPGMNAWLQLNTAS-EPMLLIPSQALIDTGSEQRVITVDADGRFVPKRVAVFQASQGVTALRSGLAEGEKVVSSGLFLIDSEANIS
>3ne5B_203 weight: 0.1302 score: 368.09 eval: 1e-45 prob: 100 identity: 0.1536 startpos: 1
---------ASGVRIDPTQTQNLGVKTATVTRGPLTFAQSFPANVSYnpvGDKvkGTPLLDLTIPDWVEAQSEYLLLRETGG------------------TATQTEGILERLRLAgrRLIATQKIQTRFTLknVVAKIQGMDPVWVTAAIPESIAWLVKDASQFTLTVPARPDKTLTIRKWTLLPGVDAATRTLQLRLEVDNADEALKPGMNAWLQLNTASE-PMLLIPSQALIDTGSEQRVITVDADGRFVPKRVAVFQASQGVTALRSGLAEGEKVVSSGLFLIDSEANIS
>3t51B_303 weight: 0.0107 score: 20.56 eval: n/a prob: n/a identity: 0.1604 startpos: 1
---------ASGVRIDPTQTQNLGVKTATVTRGPLTFAQSFPANVsaIVqgDKvkGTPLLDLTIPDWVEAQSEYLLLRET------------------GGTATQTEGILERLRLaeADIRRLIAtiTAFDLRavVAKIQGMDPVWVTAAIPESIAWLVKDASQFTLTVPARPDKTLTIRKWTLLPGVDAATRTLQLRLEVDNADEALKPGMNAWLQLNTAS-EPMLLIPSQALIDTGSEQRVITVDADGRFVPKRVAVFQASQGVTALRSGLAEGEKVVSSGLFLIDSEANIS
>3t51B_105 weight: 0.0077 score: 186.7 eval: 2.9e-06 prob: n/a identity: 0.1536 startpos: 34
------------------------ANVSYNEYQYAIVQARAAGFIDKVYPldKVqgTPLLDLTIPDWVEAQSEYLLLRETGGTATQTEGILERLRLAGM-PEADIRRLIATQKIQTRFTLKadGVITAFDL-nVVAKIQGMDPVWVTAAIPESIAWLVKDASQFTLTVPARPDKTLTIRKWTLLPGVDAATRTLQLRLEVDNADEALKPGMNAWLQLNTAS-EPMLLIPSQALIDTGSEQRVITVDADGRFVPKRVAVFQASQGVTALRSGLAEGEKVVSSGLFLIDSEANIS
>2859
PSKPIISENGEKIEFKENSPGLEIIQTKEIGKDGEFINVDAPARLIASTSPSVSGGERIILFESAELNDLYVGYVHSRNSLVRSIKNFERITDMFKHRVATEKDLIEAETQRNNDQAELAEFEGKLRAVGLNPALLGKSGAQSAWIISDVPESQLSKLKKGKRVKVRFSSFPNEEWSGTAEALGDNVDPMTRTVKVRIVISNAGYKLKPGMFANVKFPEDTANDTVVVPFNAIVTVEGQNYVFVEEAPHEFVRREVTLGISTTDRVNVIEGLTKGDRVVVQGSILLKGLSFGF
>4l8jA_202 weight: 0.6181 score: 350.77 eval: 1e-45 prob: 100 identity: 0.1706 startpos: 1
-----------------DTALVRPVKTATVSSQSV-ILKDFSGMVEAvveGQRvkGQLIAAIDPRD---ISLQYAADKAAYETAAAQVERNKRLLGRQAISLQEYEISVANYQKAKSAYELSTNNMRDTKLLApiVRLVNTRKLRIKFTVPDDYLYLLRAKDAtkVEFDTYKGTVFNARLEEYLD-ISTDGTGIPVTIIIDdfiYDVKPGFTCNIRLASDIApkLMNVPLSAVFGdennTYVWIVKD-NKVNRREVTVYSPteANLLISKGLKPGETVVTAGVYQLVEGQRIK
>4l8jA_110 weight: 0.2011 score: 182.9 eval: 3.9e-06 prob: n/a identity: 0.1604 startpos: 22
------------------------DFSGMVEA-VEYVKLAfsGQIINLPvqRVKKGQLIAAIDP---RDISLQYAADKAAYETAAAQVERNKRLLGRQAISLQEYEISVANYQKAKSAYELSTNNMRDTKL-eGIVRLVNTRKLRIKFTVPDDYLYLLRadATFKVEFDTYKGTVFNARLEEYL-DISTDGTGIPVTIIIDDaiYDVKPGFTCNIRLASDIaeKLMNVPLSAVFGdnKNTYVWIVK-DNKVNRREVTVYSPteANLLISKGLKPGETVVT-------------
>4l8jA_305 weight: 0.1807 score: 17.2 eval: n/a prob: n/a identity: 0.1570 startpos: 4
LVRPVKTAT----------VSSQSVILKDFSGmvEYVKLavSGQIInpVvgQRVkgQLIAAIDPR---DISLQYAADKAAYETAAAQVERNKRLLGRQAISLQEYEISVANYQKAKSAYELSTNNMRDTKlgEGIVRLVNTRKLRIKFTVPDDYLYLLRAkaTFKVEFDTYKGTVFNARLEEYLDI-STDGTGIPVTIIIDdtIYDVKPGFTCNIRLapFIEEKLMNVPLSAVFGDSENKNTYVWIvdNKVNRREVTVYSpgEANLLISKGLKPGETVVTAGVYQLVEGQRIK
>2859
PSKPIISENGEKIEFKENSPGLEIIQTKEIGKDGEFINVDAPARLIASTSPSVSGGERIILFESAELNDLYVGYVHSRNSLVRSIKNFERITDMFKHRVATEKDLIEAETQRNNDQAELAEFEGKLRAVGLNPALLGKSGAQSAWIISDVPESQLSKLKKGKRVKVRFSSFPNEEWSGTAEALGDNVDPMTRTVKVRIVISNAGYKLKPGMFANVKFPEDTANDTVVVPFNAIVTVEGQNYVFVEEAPHEFVRREVTLGISTTDRVNVIEGLTKGDRVVVQGSILLKGLSFGF
>5ng5A_103 weight: 0.6630 score: 197.4 eval: 1.2e-06 prob: n/a identity: 0.1570 startpos: 1
----------------------PAVGVVTVKTEPLQITTELPGRTSAYR-sDIEAGVSLYQIDpaTYDSAKGDLAKAQAAANIAQLTVNRYQKLLGTQYISKQEYDQALADAQQANAAVTAAKAAVETAR-aTALATVQQLDPIYVDVTQSSNDMMRLK-kAKVSLITSDGIKFPQDGTLEFSDVTVDQTTGSITLRAIFPNPDHTMMPGMFVRARLEEGLNPNAILVPQQGVTRTpgDATVLVVGADDKVETRPIVASQAIGDKWLVTEGLKAGDRVVISGLQKVR------
>5ng5A_304 weight: 0.3111 score: 19.22 eval: n/a prob: n/a identity: 0.1604 startpos: 1
----------------------PAVGVVTVKTEPLQITTELPGRTSaeVrgSDiaGVSLYQIDpaTYDSAKGDLAKAQAAANIAQLTVNRYQKLLGTQYISKQEYDQALADAQQANAAVTAAKAAVETArqATALATVQQLDPIYVDVTQSSNDMMRLkeNGKAKVSLITSDGIKfdGTLEFSDVTVDQTTGSITLRAIFPNPDHTMMPGMFVRARLEEGLNPNAILVPQQGVTrpRGDATVLVVGADDKVETRPIVASQAIGDKWLVTEGLKAGDRVVISGLQKVRPGVQVK
>5v5sD_306 weight: 0.0094 score: 16.93 eval: n/a prob: n/a identity: 0.1638 startpos: 1
----------------------PAVGVVTVKTEPLQITTELPGRTSaeVrgSDIegVSLYQIDpaTYDSAKGDLAKAQAAANIAQLTVNRYQKLLGTQYISKQEYDQALADAQQANAAVTAAKAAVETArqATALATVQQLDPIYVDVTQSSNDFLRLkeNGKAKVSLITSDGIKfdGTLEFSDVTVDQTTGCITLRAIFPNPDHTLLPGMFVRARLEEGLNPNAILVPQQGVTrpRGDATVLVVGADDKVETRPIVASQAIGDKWLVTEGLKAGDRVVISGLQKVRPGVQVK
>4dk0A_307 weight: 0.0085 score: 16.36 eval: n/a prob: n/a identity: 0.1570 startpos: 1
------------------------YLTEEVKRGNIEKNVVATGSIESivSgqQVkgDLLAEIDsaALASYQAQLVARKTAYDVALSNYQRLSKLYGQKATSLDTLNTAKATLNNAKAEMDVVQENIKQAevtPTIIKVADLSKMRIKPEISEGDITKVKAGQDVTFTILSDNKTVYHAKIDSVDPATTTIsvYYYANIIVENPEHVLRIGMTTENNIKIADVQNVLFIPNLAV--QQDKYVVNV-LNTTQ--EREIEIGVQNDFQTEVKSGLTEGEKVVISQ-----------
>4dk1A_308 weight: 0.0081 score: 16.27 eval: n/a prob: n/a identity: 0.1263 startpos: 1
--------------------------TEEVKRGNIEKNVVATGSIESivSgqQvkGDLLAEIDP---ATYEADYQSAQANLASTQEQAQRYKLLVADQAVSKQQYADANAAYLQSKAAVEQARINLRYTKitPTIIKVADLSKMRIKPEISEGDITKVKAGQDVTFTILSDNKTVYHAKIDSVDPATTTIsvYYYANIIVENPEHVLRIGMTTENNIKIADVQNVLFIPNLAV----------------------QEIGVQNDFQTEVKSGLTEGEKVVIS------------
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