T1061 Domain 4 Parse 1 Confidence: 0.00

Job ID	Status	Method	Username	Target	Length	Date (PST)	Expiration Date (PST)
29815	Complete	Structure prediction	casp	T1061	949	19 Jun 2020	-

Domain ID	Domain	Parse	Confidence	Modeling Method	Model Span	Length	Date (PST)
29310	4	1	0.00	comparative modeling	400-557	158	20 Jun 2020

                  .  410    .  420    .  430    .  440    .  450    .  460    .  470    .  480    .  490    .  500    .  510    .  520    .  530    .  540    .  550    .  
   sequence: NGPEYWDSRYKLLDTAYAIVRFTINENRTEIPEISAEVQGKKVKVYNSDGTIKADKTSLNGIWQLMDYLTSDRYGADITLDQFPLQKVISEAKILDIIDESYQTSWQPYWRYVGWNDPLSENRQIVQLNTILDTSESVFKNVQGILESFGGAINNLSG
 deepconcnf: --------------EEEEEEEEEE--------EEEEEE--EEEEE---------HHHHHHHHHHHHHHHH--------------HHHHHHHHHHH-EEE---------EEEE----------EEEEEEEEEEE----HHHHHHHHHHH----E-----
    psipred: -------HHH-----EEEEEEEEE---------EEEEEE--EEEEE---------EE---HHHHHHHHHH---------HHH--HHHHHHHHHHH-----------------------------EEEEEEEEE----HHHHHHHHHHH---EEE----
    spider3: -------HH-----EEEEEEEEEE---------EEEEEEEEEEE----------------HHHHHHHHHH---------HHH--HHHHHHHHHHHHHH--------------------------EEEEEEEEE----HHHHHHHHHHHH-EEEEE---

View

GREMLIN (Neff(80%)/√Len: 80.0)

Alignment

>29310
NGPEYWDSRYKLLDTAYAIVRFTINENRTEIPEISAEVQGKKVKVYNSDGTIKADKTSLNGIWQLMDYLTSDRYGADITLDQFPLQKVISEAKILDIIDESYQTSWQPYWRYVGWNDPLSENRQIVQLNTILDTSESVFKNVQGILESFGGAINNLSG
>3csvA_w000 weight: 1.0000 score: 0.00003 eval: n/a prob: n/a identity: 0.1013 startpos: 53
-----DLAQYLRNLDISAPEIYAEEHARGLLLIEDLGDALFTEVINNDPAQEMPLYRLDPLSEMTRLAFSEYRYAILGDAEDNRKRFEHRFAQILSVHRFHAQNLWLPEREGLARVGVIDFQDAKYDLVSLLRRDVPAQVEAQMIDHYQRNMRIL---

Alignment cluster 1 [ RosettaCM constraints ]

>29310
NGPEYWDSRYKLLDTAYAIVRFTINENRTEIPEISAEVQGKKVKVYNSDGTIKADKTSLNGIWQLMDYLTSDRYGADITLDQFPLQKVISEAKILDIIDESYQTSWQPYWRYVGWNDPLSENRQIVQLNTILDTSESVFKNVQGILESFGGAINNLSG
>5ifuB_w000 weight: 1.0000 score: 0.00001 eval: n/a prob: n/a identity: 0.0443 startpos: 159
---GIKSEGEKFGGANFTSTAEAFISENGRAIQAATSHYLGTFAKFKIEFEVKQYVHQTYKVVIVPKILKNAQINCVYDDRAYSPGYKFNHWEIPIRIEVGPKDL------------QNNSCVIVRRDNNEK-CNVKKESVLLETQQMLDIHKNL---

Alignment cluster 2 [ RosettaCM constraints ]

>29310
NGPEYWDSRYKLLDTAYAIVRFTINENRTEIPEISAEVQGKKVKVYNSDGTIKADKTSLNGIWQLMDYLTSDRYGADITLDQFPLQKVISEAKILDIIDESYQTSWQPYWRYVGWNDPLSENRQIVQLNTILDTSESVFKNVQGILESFGGAINNLSG
>6fplA_w000 weight: 1.0000 score: 0.00001 eval: n/a prob: n/a identity: 0.0570 startpos: 22
---DGLTTRKLAQKLGIEQPTLYWHVKNKRALLDALAVEILHHDYSLPAGESWQSFLRNNAMSFRRALLRYKVHLGTRPDEKQ--YDTVETQLRFMTGFSLRDGL-----------------YAISAV------SHFTLGAVLAQEQAFLHGLES---

Alignment cluster 3 [ RosettaCM constraints ]

>29310
NGPEYWDSRYKLLDTAYAIVRFTINENRTEIPEISAEVQGKKVKVYNSDGTIKADKTSLNGIWQLMDYLTSDRYGADITLDQFPLQKVISEAKILDIIDESYQTSWQPYWRYVGWNDPLSENRQIVQLNTILDTSESVFKNVQGILESFGGAINNLSG
>5b6lA_w000 weight: 1.0000 score: 0.00002 eval: n/a prob: n/a identity: 0.0443 startpos: 15
---VRIDGQGSGDNSGIILTQVRGTDEVTDLAVVKILQVGDWAIAVGNPDNTVTLGIISINPNSGPLLNARGEVIGINTAFAIPIDQAKAIQNGVQMMNITVDQAQQNNRNPNSPFIIPEVDGILVMR---VLPGTPAERAGIRRGDVI---------

Alignment cluster 4 [ RosettaCM constraints ]

T1061 Domain 4 Parse 1 Confidence: 0.00 Download Results Archive Download Domain Models

T1061 Domain 4 Parse 1 Confidence: 0.00