SSGCID - LpinA.19843.a Disulfide interchange transmembrane protein Domain 2 Parse 1 Confidence: 0.62

Job ID	Status	Method	Username	Target	Length	Date (PST)	Expiration Date (PST)
2679	Domain complete	Structure prediction	ssgcid	SSGCID - LpinA.19843.a Di...	458	9 Apr 2019	-

Domain ID	Domain	Parse	Confidence	Modeling Method	Model Span	Length	Date (PST)
2981	2	1	0.62	comparative modeling	326-458	133	14 Apr 2019

               330    .  340    .  350    .  360    .  370    .  380    .  390    .  400    .  410    .  420    .  430    .  440    .  450    .   
   sequence: MYNLERTNSISVVEMETKGNLSWHRIPSKAYAEGTETGKKVFIDFYADWCTNCKTFEELTQSDSALNDALQGAVLLKIKDQDPIFETYAKDPRFEELKIGLPFFVILDADGNLLYKNTDYQDTSTMIQILKQL
 deepconcnf: ---------------------EE---HHHHHHHHHHH---EEEEEE----HHHHHHHHHH---HHHHHHH--EEEEEE----HHHHHHH-------------EEEEE-----EEEEE-----HHHHHHHH---
    psipred: --------------------------HHHHHHHHHH---EEEEEEE----HHHHHHHHH----HHHHHHHH-EEEEEE----HHHHHH--HHHHHH------EEEEE-----EE--------HHHHHHHHHH-
    spider3: --------------------------HHHHHHHHHHH---EEEEEE----HHHHHHHHHH---HHHHHHHH--EEEEE----HHHHHHH--HHHHHH-----EEEEE-----EEEE------HHHHHHHHH--

View

GREMLIN (Neff(80%)/√Len: 130.7)

Alignment

>2981
MYNLERTNSISVVEMETKGNLSWHRIPSKAYAEGTETGKKVFIDFYADWCTNCKTFEELTQSDSALNDALQGAVLLKIKDQDPIFETYAKDPRFEELKIGLPFFVILDADGNLLYKNTDYQDTSTMIQILKQL
>2ju5A_201 weight: 0.1450 score: 130.85 eval: 2.9e-20 prob: 99.87 identity: 0.1579 startpos: 5
---ASGEN-LQQTRPIAAANLQWE-SYAEALEHSKQDHKPIGLFFtsDWCMWCIKMQDQILQSSEFKHFAGvlHMVEVDFPQkkNQEL-----KAQYKvgFPELVFIDAEGKQLARMGfpGGGAAYVSKVKSA
>2lstA_101 weight: 0.1448 score: 90.24 eval: 4.7e-06 prob: n/a identity: 0.1579 startpos: 1
------------------MSLRWYP-YPEALALAQAHGRMVMVYFHSEHCPYCQQMNTFVLSDPGVSRLlaRFVVASVSVDTPEGQEL-----ARRYRvgTPTFVFLVPkwEEVGRLFGSRPRAEFLKELRQV
>6dnuB_301 weight: 0.0949 score: 18.23 eval: n/a prob: n/a identity: 0.1729 startpos: 1
-------------NAMFADTAALKAAMDTALKEH--PDKPVVLDFYADWCISCKEMAAYTLNQPEVHQAVDmfFQIDVTANTP-----EHQALLKEYGlgPPGVFVVRSDGSRSEPLLGFVKADKFIEWYEQN
>1vrsD_w014 weight: 0.0777 score: 0.18919 eval: n/a prob: n/a identity: 0.2406 startpos: 12
-------------------------ELNQALVEA--KGKPVMLDLYADWCVASKEFEKYTFSDPQVQKALADTVLLQANVT---ANDAQDVALLKHLNVGLPTILFFDGQGQEHARVTGFMDAETFSAHLR--
>2fweA_w018 weight: 0.0740 score: 0.23746 eval: n/a prob: n/a identity: 0.2481 startpos: 12
-------------------------ELNQALVEA--KGKPVMLDLYADWCVACKEFEKYTFSDPQVQKALADTVLLQANVT---ANDAQDVALLKHLNVGLPTILFFDGQGQEHARVTGFMDAETFSAHLR--
>2fwgA_w020 weight: 0.0725 score: 0.25845 eval: n/a prob: n/a identity: 0.2481 startpos: 13
-------------------------ELNQALVEA--KGKPVMLDLYADWCVACKEFEKYTFSDPQVQKALADTVLLQANVTA---NDAQDVALLKHLNVGLPTILFFDGQGQEHARVTGFMDAETFSAHLR--
>4ip1A_w018 weight: 0.0633 score: 0.23387 eval: n/a prob: n/a identity: 0.2556 startpos: 12
-------------------------ELNQALVEA--KGKPVMLDLYADWCVACKEFEKYTFSDPQVQKALADTVLLKANVTA---NDAQDVALLKHLNVGLPTILFFDGQGQEHARVTGFMDAETFSAHL---
>2fwhA_w013 weight: 0.0615 score: 0.17476 eval: n/a prob: n/a identity: 0.2481 startpos: 12
-------------------------ELNQALVEA--KGKPVMLDLYADWCVACKEFEKYTFSDPQVQKALADTVLLQANVTA---NDAQDVALLKHLNVGLPTILFFDGQGQEHARVTGFMDAETFSAHLR--
>4ip6A_w013 weight: 0.0567 score: 0.17575 eval: n/a prob: n/a identity: 0.2481 startpos: 12
-------------------------ELNQALVEA--KGKPVMLDLYADWCVACKEFEKYTFSDPQVQKALADTVLLAANVTA---NDAQDVALLKHLNVGLPTILFFDGQGQEHARVTGFMDAETFSAHL---
>6dnuB_w007 weight: 0.0503 score: 0.09513 eval: n/a prob: n/a identity: 0.1654 startpos: 9
-------------------------ALKAAMDTALKEHKPVVLDFYADWCISCKEMAAYTLNQPEVHQAVDMERFFQIDV---TANTPEHQALLKEYGLGPPGVFVVRSDGSRSEPLLGFVKADKFIEWYE--
>6dnlA_w008 weight: 0.0396 score: 0.09850 eval: n/a prob: n/a identity: 0.1504 startpos: 7
-------------------------ALKAAMDTALKEHPDVVLDFYADWCISCKEMAAYTLNQPEVHQAVDMERFFQIDV---TANKPEHQALLKEYGLGPPGVFVVRSDGSRSEPLLGFVKADKFIEWYE--
>4fybA_w006 weight: 0.0361 score: 0.07925 eval: n/a prob: n/a identity: 0.1053 startpos: 15
-------------------------DNKSIS--P--NDKYMLLVFGRNGCSYCERFK-KDLNVKELRDYIKHFSAYYVNINNEKEIKMSTEELAQIYAVSTPTIVLSDKTGKTIYELPGYMPSTQFLAVLE--
>3f9uA_w018 weight: 0.0299 score: 0.22322 eval: n/a prob: n/a identity: 0.1729 startpos: 8
-------------------------DYDLGMEYARQHNKPVMLDFTGYGCVNCRKMELAVWTDPKVSSIINDYVLITLYVIMENGTERTLRTVGDKWKFAQPFYVLIDNEGNPLKSYAYDEDISKYINFLQ--
>2ju5A_104 weight: 0.0046 score: 86.86 eval: 8.1e-06 prob: n/a identity: 0.1504 startpos: 20
-------------------NLQWE-SYAEALEHSKQDHKPIGLFFTgdWCMWCIKMQDQILQSSEFKHFAghLHMVEVDFPQKNHqrQKNQELKAQYKvgFPELVFIDAEGKQLARMGFegGGAAYVSKVKSA
>2kucA_102 weight: 0.0042 score: 89.16 eval: 5.6e-06 prob: n/a identity: 0.1429 startpos: 1
---------------AQADGIAFResFPEALKRAEVEDKLLFVDCFTTWCGPCKRLSKVVFKDSLVADYFnhFVNLKMDMEKGEGVEL-----RKKYGvaYPTLLFINSSGEVVYRLVGAEDAPELLKKVKLG
>2lstA_202 weight: 0.0041 score: 156.99 eval: 3.9e-27 prob: 99.8 identity: 0.1729 startpos: 1
------------------MSLRWYP-YPEALALAQAHGRMVMVYFHSEHCPYCQQMNTFVLSDPGVSRLLerFVVASVSVDTPEGQELAR-----RYRvgTPTFVFLVPkgAwvGRLFGSRPRAEFLKELRQV
>2ec4A_109 weight: 0.0032 score: 83.46 eval: 1.4e-05 prob: n/a identity: 0.0902 startpos: 25
-------------------HPVFFisLEAAFQEAFYvrKLLAIYLHHDESVLTNVFCSQMLCAESIVSYLsnFITWAWDlfLTMCNRHFGSVVAQTI-dQFPLFLIIMGknEVLNVIQGNTTVDELMMRLMAA
>1vrsD_307 weight: 0.0030 score: 16.9 eval: n/a prob: n/a identity: 0.2481 startpos: 1
--------------HLNFTQIKTVDELNQALVEA--KGKPVMLDLYADWCVASKEFEKYTFSDPQVQKALADTVLLQAnaNDA-----QDVALLKHLNvgLPTILFFDGQGQEHprVTGFMDAETFSAHLRDR
>2fweA_106 weight: 0.0030 score: 84.67 eval: 1.1e-05 prob: n/a identity: 0.2481 startpos: 6
-------------------QIKTVDELNQALVEAK--GKPVMLDLYADWCVACKEFEKYTFSDPQVQKALADTVLLQANVTANDAQDV---ALLKHLNvgLPTILFFDGQGQEhaRVTGFMDAETFSAHLRDR
>2fwhA_110 weight: 0.0028 score: 83.23 eval: 1.4e-05 prob: n/a identity: 0.2481 startpos: 6
-------------------QIKTVDELNQALVEAK--GKPVMLDLYADWCVACKEFEKYTFSDPQVQKALADTVLLQANVTANDAQDV---ALLKHLNvgLPTILFFDGQGQEhaRVTGFMDAETFSAHLRDR
>6dnuA_302 weight: 0.0028 score: 17.89 eval: n/a prob: n/a identity: 0.1729 startpos: 1
--------------AMFADTAALKAAMDTALKEH--PDKPVVLDFYADWCISCKEMAAYTLNQPEVHQAVDmfFQIDVTANTP-----EHQALLKEYGlgPPGVFVVRSDGSRSEPLLGFVKADKFIEWYEQN
>1vrsD_107 weight: 0.0027 score: 84.38 eval: 1.2e-05 prob: n/a identity: 0.2406 startpos: 3
-------------------NFTQIKTVDELNQALVekGKPVMLDLYADWCVASKEFEKYTFSDPQVQKALADTVLLQANVTANDAQDV---ALLKHLNvgLPTILFFDGQGQEhaRVTGFMDAETFSAHLRDR
>2fwhA_304 weight: 0.0027 score: 17.28 eval: n/a prob: n/a identity: 0.2556 startpos: 1
--------------HLNFTQIKTVDELNQALVEAK--GKPVMLDLYADWCVACKEFEKYTFSDPQVQKALADTVLLQAnaNDA-----QDVALLKHLNvgLPTILFFDGQGQEHprVTGFMDAETFSAHLRDR
>2ju5A_308 weight: 0.0026 score: 16.87 eval: n/a prob: n/a identity: 0.1579 startpos: 1
ARRRASGENLQQTRPIAAANLQWES-YAEALEHSKQDHKPIGLFFtsDWCMWCIKMQDQILQSSEFKHFAGvlHMVEVdnHQPEEQRQKNQELKAQYKvgFPELVFIDAEGKQLARMGfpGGGAAYVSKVKSA
>3iraA_103 weight: 0.0026 score: 88.74 eval: 6e-06 prob: n/a identity: 0.1278 startpos: 22
--------------------VDWYPWGEEAFEKARKENKPVFLSIGYSTCHWCHMMAHESFEDEEVAGLmeAFVSIKVDreRPDIDNIYMTVCQIILggGWPLNIIMTPGKKPFFAGTYIPKniGMLELVPRI
>4ip6A_309 weight: 0.0025 score: 16.84 eval: n/a prob: n/a identity: 0.2556 startpos: 1
--------------HLNFTQIKTVDELNQALVEA--KGKPVMLDLYADWCVACKEFEKYTFSDPQVQKALADTVLLAAnaNDA-----QDVALLKHLNvgLPTILFFDGQGQEHprVTGFMDAETFSAHLRDR
>2fweA_305 weight: 0.0024 score: 17.11 eval: n/a prob: n/a identity: 0.2556 startpos: 1
--------------HLNFTQIKTVDELNQALVEAK--GKPVMLDLYADWCVACKEFEKYTFSDPQVQKALADTVLLQAnaNDA-----QDVALLKHLNvgLPTILFFDGQGQEHprVTGFMDAETFSAHLRDR
>4ip1A_310 weight: 0.0023 score: 16.78 eval: n/a prob: n/a identity: 0.2632 startpos: 1
--------------HLNFTQIKTVDELNQALVEA--KGKPVMLDLYADWCVACKEFEKYTFSDPQVQKALADTVLLKAnaNDA-----QDVALLKHLNvgLPTILFFDGQGQEHprVTGFMDAETFSAHLRDR
>2kucA_306 weight: 0.0020 score: 16.96 eval: n/a prob: n/a identity: 0.1429 startpos: 1
---------------AQADGIAFRElfPEALKRAEVEDKLLFVDCFTTWCGPCKRLSKVVFKDSLVADYFNrfVNLKMDMEKGEG-----VELRKKYGvaYPTLLFINSSGEVVYRLVGAEDAPELLKKVKLG
>4ip1A_108 weight: 0.0019 score: 83.72 eval: 1.3e-05 prob: n/a identity: 0.2556 startpos: 3
-------------------NFTQIKTVDELNQALVekGKPVMLDLYADWCVACKEFEKYTFSDPQVQKALADTVLLKANVTANDAQDV---ALLKHLNvgLPTILFFDGQGQEhaRVTGFMDAETFSAHLRDR
>6dnlA_303 weight: 0.0018 score: 17.82 eval: n/a prob: n/a identity: 0.1729 startpos: 1
---------------MFADTAALKAAMDTALKEH--PDKPVVLDFYADWCISCKEMAAYTLNQPEVHQAVDmfFQIDVTANKP-----EHQALLKEYGlgPPGVFVVRSDGSRSEPLLGFVKADKFIEWYEQN
>2dlxA_105 weight: 0.0013 score: 86.52 eval: 8.5e-06 prob: n/a identity: 0.1353 startpos: 24
-------------------DLMHKGSFETAKECGQMQNKWLMINIQNVQDFACQCLNRDVWSNEAVKNIIrhFIFWQVYHDSEEGQRY-----IQFYKldFPYVSILDPrgQKLVEWHQL-DVSSFLDQVTGF
>3iraA_203 weight: 0.0013 score: 191.32 eval: 1.5e-32 prob: 99.91 identity: 0.1278 startpos: 2
EPNRLIKEKSPYLLQHAYNPVDWYPWGEEAFEKARKENKPVFLSIGYSTCHWCHMMAHESFEDEEVAGLMnaFVSIKVDREERpiDNIYMTVCQIILggGWPLNIIMTPGKKPFF-AGTYIPKngMLELVPRI

Alignment cluster 1 [ RosettaCM constraints ]

IDLabel

.2.4.6.8.10.12.14.16.18.20.22.24.26.28.30.32.34.36.38.40.42.44.46.48.50.52.54.56.58.60.62.64.66.68.70.72.74.76.78.80.82.84.86.88.90.92.94.96.98.100.102.104.106.108.110.112.114.116.118.120.122.124.126.128.130.132.

12981

22ju5A_201

32lstA_101

46dnuB_301

51vrsD_w014

62fweA_w018

72fwgA_w020

84ip1A_w018

92fwhA_w013

104ip6A_w013

116dnuB_w007

126dnlA_w008

134fybA_w006

143f9uA_w018

152ju5A_104

162kucA_102

172lstA_202

182ec4A_109

191vrsD_307

202fweA_106

212fwhA_110

226dnuA_302

231vrsD_107

242fwhA_304

252ju5A_308

263iraA_103

274ip6A_309

282fweA_305

294ip1A_310

302kucA_306

314ip1A_108

326dnlA_303

332dlxA_105

343iraA_203

SSGCID - LpinA.19843.a Disulfide interchange transmembrane protein Domain 2 Parse 1 Confidence: 0.62 Download Results Archive Download Domain Models

SSGCID - LpinA.19843.a Disulfide interchange transmembrane protein Domain 2 Parse 1 Confidence: 0.62