SSGCID - MygeA.01122.a Ribosomal RNA small subunit methyltransferase A MG_463 Domain 1 Parse 1 Confidence: 0.97
| Job ID | Status | Method | Username | Target | Length | Date (PST) | Expiration Date (PST) |
|---|
| 2991 | Complete | Structure prediction | ssgcid | SSGCID - MygeA.01122.a Ri... | 259 | 17 Apr 2019 | - |
| Domain ID | Domain | Parse | Confidence | Modeling Method | Model Span | Length | Date (PST) |
|---|
| 3187 | 1 | 1 | 0.97 | comparative modeling | 1-259 | 259 | 19 Apr 2019 |
1 . 10 . 20 . 30 . 40 . 50 . 60 . 70 . 80 . 90 . 100 . 110 . 120 . 130 . 140 . 150 . 160 . 170 . 180 . 190 . 200 . 210 . 220 . 230 . 240 . 250 .
sequence: MNSFFPSRKLGQNFTVNLSVIKRIFAFVKNLNPQAIVEIGVGKGALTNYLLKLKIPYKGIEIDKRLIEYLLVEKILTEDQLVKGDILKKDFNSFFENLSPLLCGNIPYSITSPIINKFLESKLRSFVLMTQKEFANRLLAKVNSSDYSAFGAFCQYYLTITTVFKIDRHAFKPKPKVDSTLILLEKNKSVSYDFKFGLFLKQCFNQRRKMLINNLKHFFAVDYLLNIIQKQNLKTSIRAQELSPCQLFNLYQNICNGKN
deepconcnf: -----------------HHHHHHHHHHH------EEEEE-----HHHHHHHHH---EEEEE-----HHHHHHH-----EEEEE-------HHHHH-----EEEE------HHHHHHHHHH--HHHHHHHHHHHHHHHHH--------HHHHHHHHHH--EEEEEEE-----------EEEEEEEEE------HHHHHHHHHHHHHHHHHHHHHHH-----HHHHHHHHHH-------------HHHHHHHHHHHH----
psipred: ------------------HHHHHHHHH--------EEEE-----HHHHHHHHH---EEEEEE----HHHHHHH-----EEEEE--HHHH-HHHHH-----EEEEE--HHHHHHHHHHHHHHHH--EEEEEEHHHHHHH---------HHHHHHHHH----EEEEEE-HHH--------EEEEEEE-------HHHHHHHHHHHHHHHHHHHHHH------HHHHHHHHHH-------------HHHHHHHHHHHHH---
spider3: -----------------HHHHHHHHHH-------EEEEE-----HHHHHHHH----EEEEEE---HHHHHHHH-----EEEEE-------HHHHH-----EEEEE--HHHHHHHHHHHHH----EEEEEEEHHHHHHHH-----HHHHHHHHHHHHH--EEEEEEE------------EEEEEEEE------HHHHHHHHHHHH----HHHHHHHHH---HHHHHHHHHH--------HHH--HHHHHHHHHHHHH---
>3187
MNSFFPSRKLGQNFTVNLSVIKRIFAFVKNLNPQAIVEIGVGKGALTNYLLKLKIPYKGIEIDKRLIEYLLVEKILTEDQLVKGDILKKDFNSFFENLSPLLCGNIPYSITSPIINKFLESKLRSFVLMTQKEFANRLLAKVNSSDYSAFGAFCQYYLTITTVFKIDRHAFKPKPKVDSTLILLEKNKSVSYDFKFGLFLKQCFNQRRKMLINNLKHFFAVDYLLNIIQKQNLKTSIRAQELSPCQLFNLYQNICNGKN
>6iftA_201 weight: 0.3513 score: 395.94 eval: 1e-45 prob: 100 identity: 0.3012 startpos: 17
KYGFSFKKSLGQNFLIDTNILNRIVDHAEVTEKTGVIEIGPGIGALTEQLAKRAKKVVAFEIDQRLLPILKDTLsyENVTVIHQDVLKADVKSVidCDEIMVVANLPYYVTTPIIMKLLEepLKGIVVMLQKEVAERMAADPSSKEYGSLSIAVQFYTEAKTVMIVPKTVFVPQPNVDSAVIRLILRDGpeNESFFFQLIKASFAQRRKTLLNNLVNNLpkSTIEQVLEETNIDGKRRGESLSIEEFAALSNGLYKAL-
>6iftA_101 weight: 0.3006 score: 258.6 eval: 3.1e-08 prob: n/a identity: 0.3050 startpos: 20
---FSFKKSLGQNFLIDTNILNRIVDHAEVTEKTGVIEIGPGIGALTEQLAKRAKKVVAFEIDQRLLPILKDTLsyENVTVIHQDVLKADVKSVIE-dEIMVVANLPYYVTTPIIMKLLEEHlkGIVVMLQKEVAERMAADPSSKEYGSLSIAVQFYTEAKTVMIVPKTVFVPQPNVDSAVIRLILRDGP-nESFFFQLIKASFAQRRKTLLNNLVNN-qKSTIEQVLEETNIDGKRRGESLSIEEFAALSNGLYKALF
>6iftA_301 weight: 0.2859 score: 27.78 eval: n/a prob: n/a identity: 0.3050 startpos: 17
KYGFSFKKSLGQNFLIDTNILNRIVDHAEVTEKTGVIEIGPGIGALTEQLAKRAKKVVAFEIDQRLLPILKDTlpYENVTVIHQDVLKADVKSVIEedEIMVVANLPYYVTTPIIMKLLEepLKGIVVMLQKEVAERMAADPSSKEYGSLSIAVQFYTEAKTVMIVPKTVFVPQPNVDSAVIRLILRDGPanESFFFQLIKASFAQRRKTLLNNLVNNlqKSTIEQVLEETNIDGKRRGESLSIEEFAALSNGLYKALF
>6ifsA_102 weight: 0.0083 score: 255.6 eval: 3.9e-08 prob: n/a identity: 0.3050 startpos: 18
---FSFKKSLGQNFLIDTNILNRIVDHAEVTEKTGVIEIGPGIGALTEQLAKRAKKVVAFEIDQRLLPILKDTLsyENVTVIHQDVLKADVKSVIE-dEIMVVANLPYYVTTPIIMKLLEEHlkGIVVMLQKEVAERMAADPSSKEYGSLSIAVQFYTEAKTVMIVPKTVFVPQPNVDSAVIRLILRDGP-nESFFFQLIKASFAQRRKTLLNNLVNN-qKSTIEQVLEETNIDGKRRGESLSIEEFAALSNGLYKALF
>3futA_202 weight: 0.0069 score: 559.84 eval: 1e-45 prob: 100 identity: 0.2587 startpos: 12
RHGLFADKRFGQNFLVSEAHLRRIVEAARPFTGP-VFEVGPGLGALTRALLEAGAEVTAIEKDLRLRPVLEETLSGLPVRLVFQDALLYPWEEVP--QGSLLVANLPYHIATPLVTRLLKTgfARLVFLVQKEVAERMTARPKTPAYGVLTLRVAHHAVAERLFDLPPGAFFPPPKVWSSLVRLTPTGAL-DDPGLFRLVEAAFGKRRKTLLNALAAAGykARVEEALRALGLPPRVRAEELDLEAFRRLREGLE----
>6ifsB_302 weight: 0.0067 score: 27.53 eval: n/a prob: n/a identity: 0.2896 startpos: 2
TPIRTKEILKKYNFLIDTNILNRIVDHAEVTEKTGVIEIGPGIGALTEQLAKRAKKVVAFEIDQRLLPILKDTlpYENVTVIHQDVLKADVKSVIEEqeIMVVANLPYYVTTPIIMKLLEepLKGIVVMLQKEVAERMAADPSSKEYGSLSIAVQFYTEAKTVMIVPKTVFVPQPNVDSAVIRLILRDGPanESFFFQLIKASFAQRRKTLLNNLVNNlqKSTIEQVLEETNIDGKRRGESLSIEEFAALSNGLYKALF
>1qyrB_103 weight: 0.0050 score: 255.3 eval: 4e-08 prob: n/a identity: 0.2625 startpos: 1
-----------QNFLNDQFVIDSIVSAINPQKGQAMVEIGPGLAALTEPVGERLDQLTVIELDRDLAARLQTHplGPKLTIYQQDAMTFNFGELAegQPLRVFGNLPYNISTPLMFHLFSYtiADMHFMLQKEVVNRLVAGPNSKAYGRLSVMAQYYCNVIPVLEVPPSAFTPPPKVDSAVVRLVPH-pVKDVRVLSRITTEAFNQRRKTIRNSLGNLF----SVEVLTGMGIDPAMRAENISVAQYCQMANYLAENA-
>6ifsA_303 weight: 0.0035 score: 27.36 eval: n/a prob: n/a identity: 0.3050 startpos: 15
KYGFSFKKSLGQNFLIDTNILNRIVDHAEVTEKTGVIEIGPGIGALTEQLAKRAKKVVAFEIDQRLLPILKDTlpYENVTVIHQDVLKADVKSVIEEqeIMVVANLPYYVTTPIIMKLLEepLKGIVVMLQKEVAERMAADPSSKEYGSLSIAVQFYTEAKTVMIVPKTVFVPQPNVDSAVIRLILRDGPanESFFFQLIKASFAQRRKTLLNNLVNNlqKSTIEQVLEETNIDGKRRGESLSIEEFAALSNGLYKALF
>6ifsB_104 weight: 0.0034 score: 253.2 eval: 4.6e-08 prob: n/a identity: 0.2896 startpos: 14
------------NFLIDTNILNRIVDHAEVTEKTGVIEIGPGIGALTEQLAKRAKKVVAFEIDQRLLPILKDTLsyENVTVIHQDVLKADVKSVIE-dEIMVVANLPYYVTTPIIMKLLEEHlkGIVVMLQKEVAERMAADPSSKEYGSLSIAVQFYTEAKTVMIVPKTVFVPQPNVDSAVIRLILRDGP-nESFFFQLIKASFAQRRKTLLNNLVNN-qKSTIEQVLEETNIDGKRRGESLSIEEFAALSNGLYKALF
>6ifsA_203 weight: 0.0028 score: 678.57 eval: 1e-45 prob: 100 identity: 0.3050 startpos: 15
KYGFSFKKSLGQNFLIDTNILNRIVDHAEVTEKTGVIEIGPGIGALTEQLAKRAKKVVAFEIDQRLLPILKDTLsyENVTVIHQDVLKADVKSVIecDEIMVVANLPYYVTTPIIMKLLEepLKGIVVMLQKEVAERMAADPSSKEYGSLSIAVQFYTEAKTVMIVPKTVFVPQPNVDSAVIRLILRDGpeNESFFFQLIKASFAQRRKTLLNNLVNNlqKSTIEQVLEETNIDGKRRGESLSIEEFAALSNGLYKALF
>3tpzA_105 weight: 0.0027 score: 253.1 eval: 4.6e-08 prob: n/a identity: 0.2625 startpos: 1
---------FGQNFLNDQFVIDSIVSAINPQKGQAMVEIGPGLAALTEPVGERLDQLTVIELDRDLAARLQTHplGPKLTIYQQDAMTFNFGELAegQPLRVFGNPPYNISTPLMFHLFSyaIADMHFMLQKEVVNRLVAGPNSKAYGRLSVMAQYYCNVIPVLEVPPSAFTPPPKVDSAVVRLVPHATM-dVRVLSRITTEAFNQRRKTIRNSLGNLF----SVEVLTGMGIDPAMRAENISVAQYCQMANYLAEN--
>3futA_106 weight: 0.0023 score: 252.3 eval: 4.9e-08 prob: n/a identity: 0.2587 startpos: 15
---LFADKRFGQNFLVSEAHLRRIVEAARPF-TGPVFEVGPGLGALTRALLEAGAEVTAIEKDLRLRPVLEETLSGLPVRLVFQDALLYPWEEVP--QGSLLVANLPYHIATPLVTRLLKTgfARLVFLVQKEVAERMTARPKTPAYGVLTLRVAHHAVAERLFDLPPGAFFPPPKVWSSLVRLTPTGA-LDDPGLFRLVEAAFGKRRKTLLNALAAayPKARVEEALRALGLPPRVRAEELDLEAFRRLREGLE----
>3futA_304 weight: 0.0022 score: 27.06 eval: n/a prob: n/a identity: 0.2587 startpos: 12
RHGLFADKRFGQNFLVSEAHLRRIVEAARPFTGP-VFEVGPGLGALTRALLEAGAEVTAIEKDLRLRPVLEETLSGLPVRLVFQDALLYPWEEV--PQGSLLVANLPYHIATPLVTRLLKtrFARLVFLVQKEVAERMTARPKTPAYGVLTLRVAHHAVAERLFDLPPGAFFPPPKVWSSLVRLTPTG-ALDDPGLFRLVEAAFGKRRKTLLNALAAayPKARVEEALRALGLPPRVRAEELDLEAFRRLREGLE----
>1qyrA_107 weight: 0.0021 score: 247.9 eval: 6.8e-08 prob: n/a identity: 0.2625 startpos: 1
-----------QNFLNDQFVIDSIVSAINPQKGQAMVEIGPGLAALTEPVGERLDQLTVIELDRDLAARLQTHplGPKLTIYQQDAMTFNFGELAEkqPLRVFGNLPYNISTPLMFHLFSyaIADMHFMLQKEVVNRLVAGPNSKAYGRLSVMAQYYCNVIPVLEVPPSAFTPPPKVDSAVVRLVPH-pVKDVRVLSRITTEAFNQRRKTIRNSLGNLF----SVEVLTGMGIDPAMRAENISVAQYCQMANYLAENA-
>3fycA_109 weight: 0.0020 score: 243.2 eval: 9.6e-08 prob: n/a identity: 0.2780 startpos: 1
---------AAQCFLIDKNFVNKAVESANLTKDDVVLEIGLGKGILTEELAKNAKKVYVIEIDKSLEPYANKLKeyNNIEIIWGDALKVDLNKL---DFNKVVANLPYQISSPITFKLIKRGFDLAVLMYQYEFAKRMVAKEGTKDYGRLSVAVQSRADVEIVAKVPPSAFYPKPKVYSAIVKIKPNkhIENENFFDDFLRAIFQHRNKSVRKALIDSsnKDEMKKILEDFlnLINEKVFKLSVKDIVNLSNEFYRFLQ
>3grrA_108 weight: 0.0020 score: 244.1 eval: 9e-08 prob: n/a identity: 0.2741 startpos: 1
-----------QCFLIDKNFVNKAVESANLTKDDVVLEIGLGKGILTEELAKNAKKVYVIEIDKSLEPYANKLKeyNNIEIIWGDALKVDLNKL---DFNKVVANLPYQISSPITFKLIKRGFDLAVLMYQYEFAKRMVAAAGTKDYGRLSVAVQSRADVEIVAKVPPSAFYPKPKVYSAIVKIKPNkhIENENFFDDFLRAIFQHRNKSVRKALIDSsnKDEMKKILEDFL-lINEKVFKLSVKDIVNLSNEFYRFLQ
>3fydA_110 weight: 0.0019 score: 239.9 eval: 1.2e-07 prob: n/a identity: 0.2741 startpos: 1
-----------QCFLIDKNFVNKAVESANLTKDDVVLEIGLGKGILTEELAKNAKKVYVIEIDKSLEPYANKLKeyNNIEIIWGDALKVDLNKL---DFNKVVANLPYQISSPITFKLIKRGFDLAVLMYQYEFAKRMVAAAGTKDYGRLSVAVQSRADVEIVAKVPPSAFYPKPKVYSAIVKIKPNkhIENENFFDDFLRAIFQHRNKSVRKALIDSsnKDEMKKILEDFL-lINEKVFKLSVKDIVNLSNEFYRFLQ
>3tpzA_305 weight: 0.0016 score: 26.96 eval: n/a prob: n/a identity: 0.2664 startpos: 1
---------FGQNFLNDQFVIDSIVSAINPQKGQAMVEIGPGLAALTEPVGERLDQLTVIELDRDLAARLQTHPfgPKLTIYQQDAMTFNFGELAEkqPLRVFGNPPYNISTPLMFHLFSyaIADMHFMLQKEVVNRLVAGPNSKAYGRLSVMAQYYCNVIPVLEVPPSAFTPPPKVDSAVVRLVPHATMpdVRVLSRITTEAFNQRRKTIRNSLGNLFSV----EVLTGMGIDPAMRAENISVAQYCQMANYLAEN--
>1qyrB_306 weight: 0.0014 score: 26.76 eval: n/a prob: n/a identity: 0.2625 startpos: 1
-----------QNFLNDQFVIDSIVSAINPQKGQAMVEIGPGLAALTEPVGERLDQLTVIELDRDLAARLQTHPfgPKLTIYQQDAMTFNFGELAEkqPLRVFGNLPYNISTPLMFHLFSyaIADMHFMLQKEVVNRLVAGPNSKAYGRLSVMAQYYCNVIPVLEVPPSAFTPPPKVDSAVVRLVPHATMpdVRVLSRITTEAFNQRRKTIRNSLGNLFSV----EVLTGMGIDPAMRAENISVAQYCQMANYLAENA-
>1qyrA_307 weight: 0.0013 score: 26.18 eval: n/a prob: n/a identity: 0.2625 startpos: 1
-----------QNFLNDQFVIDSIVSAINPQKGQAMVEIGPGLAALTEPVGERLDQLTVIELDRDLAARLQTHPfgPKLTIYQQDAMTFNFGELAEkqPLRVFGNLPYNISTPLMFHLFSyaIADMHFMLQKEVVNRLVAGPNSKAYGRLSVMAQYYCNVIPVLEVPPSAFTPPPKVDSAVVRLVPHATMpdVRVLSRITTEAFNQRRKTIRNSLGNLFSV----EVLTGMGIDPAMRAENISVAQYCQMANYLAENA-
>3fycA_309 weight: 0.0012 score: 25.53 eval: n/a prob: n/a identity: 0.2780 startpos: 1
---------AAQCFLIDKNFVNKAVESANLTKDDVVLEIGLGKGILTEELAKNAKKVYVIEIDKSLEPYANKLKeyNNIEIIWGDALKVDLNKL---DFNKVVANLPYQISSPITFKLIKRGFDLAVLMYQYEFAKRMVAKEGTKDYGRLSVAVQSRADVEIVAKVPPSAFYPKPKVYSAIVKIKPNKGkeNENFFDDFLRAIFQHRNKSVRKALIDsyNKDEMKKILEDFlnLINEKVFKLSVKDIVNLSNEFYRFLQ
>3gruA_310 weight: 0.0012 score: 25.15 eval: n/a prob: n/a identity: 0.2741 startpos: 1
-----------QCFLIDKNFVNKAVESANLTKDDVVLEIGLGKGILTEELAKNAKKVYVIEIDKSLEPYANKLKeyNNIEIIWGDALKVDLNKL---DFNKVVANLPYQISSPITFKLIKRGFDLAVLMYQYEFAKRMVAAAGTKDYGRLSVAVQSRADVEIVAKVPPSAFYPKPKVYSAIVKIKPNkhIENENFFDDFLRAIFQHRNKSVRKALIDsyNKDEMKKILEDFLNTnnEKVFKLSVKDIVNLSNEFYRFLQ
>3tqsA_308 weight: 0.0012 score: 25.76 eval: n/a prob: n/a identity: 0.2548 startpos: 1
-----------QHFLHDSFVLQKIVSAIHPQKTDTLVEIGPGRGALTDYLLTECDNLALVEIDRDLVAFLQKKYnqKNITIYQNDALQFDFSSVKTDKPLRVVGNLPYNISTPLLFHLFSqcIEDMHFMLQKEVVRRITAEVGSHDYGRLSVMAQYFCDNTYLFTVSPQAFTPPPRVESAIIRLIPRHNFtnLDQLSHVVKEAFSYRRKTVGNALKKLINPSQW----PLLEINPQLRPQELTVEDFVKISNILN----
>3uzuA_204 weight: 0.0012 score: 607.27 eval: 1e-45 prob: 100 identity: 0.2625 startpos: 1
-------KRFGQNFLVDHGVIDAIVAAIRPERGERMVEIGPGLGALTGPVIARLapLHAVELDRDLIGRLEQRF-GELLELHAGDALTFDFGSIArePSLRIIGNLPYNISSPLLFHLMSFavIDQHFMLQNEVVERMVAEPGTKAFSRLSVMLQYRYVMDKLIDVPPESFQPPPKVDSAIVRMIPHAPhvDPAVLGEVVTAAFSQRRKMLRNTLGGYRD----LVDFDALGFDLARRAEDIGVDEYVRVAQAVASARA
>3grrA_205 weight: 0.0006 score: 629.22 eval: 1e-45 prob: 100 identity: 0.2741 startpos: 1
-----------QCFLIDKNFVNKAVESANLTKDDVVLEIGLGKGILTEELAKNAKKVYVIEIDKSLEPYANKLklYNNIEIIWGDALKVDLNKL---DFNKVVANLPYQISSPITFKLIKRGFDLAVLMYQYEFAKRMVAAAGTKDYGRLSVAVQSRADVEIVAKVPPSAFYPKPKVYSAIVKIKPNK-geNENFFDDFLRAIFQHRNKSVRKALIDSsnKDEMKKILEDfkNLINEKVFKLSVKDIVNLSNEFYRFLQ
>3gruA_206 weight: 0.0004 score: 388.45 eval: 1e-45 prob: 100 identity: 0.2741 startpos: 1
-----------QCFLIDKNFVNKAVESANLTKDDVVLEIGLGKGILTEELAKNAKKVYVIEIDKSLEPYANKLKeyNNIEIIWGDALKVDLNK---LDFNKVVANLPYQISSPITFKLIKRGFDLAVLMYQYEFAKRMVAAAGTKDYGRLSVAVQSRADVEIVAKVPPSAFYPKPKVYSAIVKIKPNK-geNENFFDDFLRAIFQHRNKSVRKALIDSsnKDEMKKILEDfkNLINEKVFKLSVKDIVNLSNEFYRFLQ
>3fydA_207 weight: 0.0003 score: 625.25 eval: 1e-45 prob: 100 identity: 0.2741 startpos: 1
-----------QCFLIDKNFVNKAVESANLTKDDVVLEIGLGKGILTEELAKNAKKVYVIEIDKSLEPYANKLklYNNIEIIWGDALKVDLNKL---DFNKVVANLPYQISSPITFKLIKRGFDLAVLMYQYEFAKRMVAAAGTKDYGRLSVAVQSRADVEIVAKVPPSAFYPKPKVYSAIVKIKPNK-geNENFFDDFLRAIFQHRNKSVRKALIDSsnKDEMKKILEDfkNLINEKVFKLSVKDIVNLSNEFYRFLQ
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