SSGCID - MygeA.20089.a Transcription termination antitermination protein NusG MG_054 Domain 1 Parse 1 Confidence: 0.54
| Job ID | Status | Method | Username | Target | Length | Date (PST) | Expiration Date (PST) |
|---|
| 3036 | Domain complete | Structure prediction | ssgcid | SSGCID - MygeA.20089.a Tr... | 316 | 17 Apr 2019 | - |
| Domain ID | Domain | Parse | Confidence | Modeling Method | Model Span | Length | Date (PST) |
|---|
| 3410 | 1 | 1 | 0.54 | comparative modeling | 1-168 | 168 | 24 Apr 2019 |
1 . 10 . 20 . 30 . 40 . 50 . 60 . 70 . 80 . 90 . 100 . 110 . 120 . 130 . 140 . 150 . 160 .
sequence: MQASELTPKWYVAPVSIKDEAVVKNLKAKIQALGFNHEIVDVKVLKEREVHEEVYSLKSGKLPRSLKNTTFNKWFVLDDYRYLRVKISEKNLLGRYIYIKMIYSEDAWRIVRNFPGITGIVGSSGRGALPIPLDEKDANNLEQMLKGISINPSKRIMLTNTAIIEMDS
deepconcnf: ---------EEEE-----HHHHHHHHHHHHHH------EEEEEE---EEEEEEEEEE-------------EEEEEE-----EEEEEEEEEEE---EEEEEEEE---EEEEEE------EEE-------------HHHHHHHHHH----EE-----EEEE---------
psipred: ---------EEEEE---HHHHHHHHHHHHHHH-----EEEEEE---EEEEEEE---------------------EE--------EEEEEEEE---EEEEEEEE----EEEE-------EE--------------HHHHHHHHHH--EEEE----EEEEE---------
spider3: ---------EEEEE---HHHHHHHHHHHHHHH-------EEEEE-EEEEEEEEEEEE----------------EEEE------EEEEEEEE----EEEEEEEE----EEEEEE-----EEE-------------HHHHHHHHHH----------EEEEE---------
>3410
MQASELTPKWYVAPVSIKDEAVVKNLKAKIQALGFNHEIVDVKVLKEREVHEEVYSLKSGKLPRSLKNTTFNKWFVLDDYRYLRVKISEKNLLGRYIYIKMIYSEDAWRIVRNFPGITGIVGSSGRGALPIPLDEKDANNLEQMLKGISINPSKRIMLTNTAIIEMDS
>2xhcA_201 weight: 0.1773 score: 224.96 eval: 8.6e-30 prob: 99.97 identity: 0.1667 startpos: 1
-------KKWYIVLtsGYEEKVKENIEKKVEATGIKNLVGRIVIPEEVVL-----DATSPslSpkvqpDGevrVEvdYST---RKetKRRKLFPGYVFVEMIMNDEAYNFVRSVPYVMGFVSSG---GQPVPVKDREMRPILRLAgeLGFKVGDMVKIISGPFEDFAG
>1m1gA_101 weight: 0.1759 score: 89.1 eval: 2.2e-06 prob: n/a identity: 0.1786 startpos: 1
-----LEKKWYALQVegKENEAKENLLKVLELEGLKDLVDEVIVPAEEKVViyRLSLKGNARDISVLGKKGVTTFRIE-nKTEAKIVLDNKIFPGYILIKAHMNDKLLMAIEKTPHVFRPVMVG---GKPVPLKEEEVQNILNQIkkVEFEKGDQVRVIEGPFMNFTG
>2lq8A_301 weight: 0.1643 score: 22.54 eval: n/a prob: n/a identity: 0.1369 startpos: 1
---GAMKKKWYIVLtsGYEEKVKENIEKKVEATGIKNLVGRIVIPIR-----------------------------------GGQRRKSEKLFPGYVFVEMIMNDEAYNFVRSVPYVMGFVS---SGGQPVPVKDREMRPILRLAGllGFKVGDMVKIISGPFEDFAG
>2xhcA_w001 weight: 0.1239 score: 0.00552 eval: n/a prob: n/a identity: 0.1429 startpos: 1
------KKWYIVLTMSGYEEKVKENIEKKVEATGIKNLVGRIVIPEEVVLDATSPSEREARKFFAKVSGRVEVVDYSTRKEIRIYKTKRRKLFPGYVFVEMIMNDEAYNFVRSVPYVMG---FVSSGGQPVPVEMRPILRLAGLEYELGFKVGDMVKIISGPFEDFA-
>1m1gA_w000 weight: 0.1215 score: 0.00104 eval: n/a prob: n/a identity: 0.1190 startpos: 1
-----LEKKWYALQVEPKENEAKENLLKVLELEGLKDLVDEVE--EKVVIR-----------------------------AQGKEKYRLKIVFPGYILIKAHMNDKLLMAIEKTPHVFR-PVMVGGKPVPLKEVQNILNQIKRGPSKVEFEKGDQVRVIEGPFMNFT-
>1m1hA_w000 weight: 0.1215 score: 0.00326 eval: n/a prob: n/a identity: 0.1667 startpos: 6
------EKKWYALQVEPKENEAKENLLKVLELEGLKDLVDEVIVPAEEKVEVKVVESVEGDTCVNAPPISKPGQKITCKENKTEAKIVLDNIFPGYILIKAHMNDKLLMAIEKTPHVFR-PVMV-GGKP-VPLKEEEVQNILNQIKR---------------------
>2lq8A_102 weight: 0.0073 score: 84.17 eval: 5.1e-06 prob: n/a identity: 0.1369 startpos: 3
-----MKKKWYIVLTmgYEEKVKENIEKKVEATGIKNLVGRIVIPIR-----------------------------------GGQRRKSEKLFPGYVFVEMIMNDEAYNFVRSVPYVMGFVSSGG---QPVPVKDREMRPILRLA-eLGFKVGDMVKIISGPFEDFAG
>6govG_103 weight: 0.0072 score: 76.6 eval: 1.9e-05 prob: n/a identity: 0.1488 startpos: 2
-----PKKRWYVVQAfgFEGRVATSLREHIKLHNMEELFGEVMVPTEEVV----------------------------------RRKSERKFFPGYVLVQMVMNDASWHLVRSVPRVMGFIGG--TSDRPAPISDKEVDAIMNRL-kTLFEPGEMVRVNDGPFADFNG
>1m1gA_305 weight: 0.0069 score: 19.86 eval: n/a prob: n/a identity: 0.1845 startpos: 1
-----LEKKWYALQvpGKENEAKENLLKVLELEGLKDLVDEVIVPAEEKVVIRalSLKGNARDISVLGKKGVTTFRIENGEVkaKIVLDNKIFPGYILIKAHMNDKLLMAIEKTPHVFRPVMVGG---KPVPLKEEEVQNILNQIkkVEFEKGDQVRVIEGPFMNFTG
>6govG_304 weight: 0.0066 score: 20.37 eval: n/a prob: n/a identity: 0.1607 startpos: 1
----APKKRWYVVQasGFEGRVATSLREHIKLHNMEELFGEVMVPTEEVV--------RRK--------------------------SERKFFPGYVLVQMVMNDASWHLVRSVPRVMGFIGGTSD--RPAPISDKEVDAIMNRlpKTLFEPGEMVRVNDGPFADFNG
>1m1hA_202 weight: 0.0063 score: 166.07 eval: 5.9e-26 prob: 99.76 identity: 0.1845 startpos: 1
-QVQELEKKWYALQvpGKENEAKENLLKVLELEGLKDLVDEVIVPAEEKVVIRAQGKEKYRLSLKGNakKGVTTFRIENG---EVkvLDNKIFPGYILIKAHMNDKLLMAIEKTPHVFRPVMVG---GKPVPLKEEEVQNILNQIKR---------------------
>1nz8A_302 weight: 0.0063 score: 22.2 eval: n/a prob: n/a identity: 0.1905 startpos: 1
------SIEWYAVHtvGQEEKAKANLEKRIKAFGLQDKIFQVLIPTEEVVELR------------------------EGG---KKEVVRKKLFPGYLFIQMDlpNEAWEVVRGTPGITGFV---GAGMRPVPLSPDEVRHILEVSGLLG-------------------
>6govG_205 weight: 0.0062 score: 214.25 eval: 4.5e-36 prob: 99.95 identity: 0.1548 startpos: 1
----APKKRWYVVQasGFEGRVATSLREHIKLHNMEELFGEVMVPTEEVV---------------------------R-------RKSERKFFPGYVLVQMVMNDASWHLVRSVPRVMGFIGGTS--DRPAPISDKEVDAIMNRLqkTLFEPGEMVRVNDGPFADFNG
>1m1hA_105 weight: 0.0061 score: 71.85 eval: 4.3e-05 prob: n/a identity: 0.1845 startpos: 5
-----LEKKWYALQVegKENEAKENLLKVLELEGLKDLVDEVIVPAEEKVVieKYRLSlgVTTFRIEN-GEVKVVESveNKTEAKIVLDNKIFPGYILIKAHMNDKLLMAIEKTPHVFRPVMVG---GKPVPLKEEEVQNILNQIKR---------------------
>2lq8A_206 weight: 0.0057 score: 188.15 eval: 4e-31 prob: 99.89 identity: 0.1488 startpos: 1
---GAMKKKWYIVLtsGYEEKVKENIEKKVEATGIKNLVGRIVIP----I---------------------------RGG---QRRKS-EKLFPGYVFVEMIMNDEAYNFVRSVPYVMGFVSSGG---QPVPVKDREMRPILRLavELGFKVGDMVKIISGPFEDFAG
>1nz8A_104 weight: 0.0055 score: 74.45 eval: 2.8e-05 prob: n/a identity: 0.1786 startpos: 1
------SIEWYAVHTlgQEEKAKANLEKRIKAFGLQDKIFQVLIPTEEV------------------------VELRE---GGKKEVVRKKLFPGYLFIQMDlpNEAWEVVRGTPGITGFVGAG---MRPVPLSPDEVRHILEVSGLLG-------------------
>2k06A_303 weight: 0.0054 score: 22.19 eval: n/a prob: n/a identity: 0.1548 startpos: 1
-MSEAPKKRWYVVQasGFEGRVATSLREHIKLHNMEDLFGEVMVPTEEVVE-------------------------IRGG---QRRKSERKFFPGYVLVQMVMNDASWHLVRSVPRVMGFIGGTSD--RPAPISDKEVDAIMNRLQQVGDKPR---------------
>1nz8A_203 weight: 0.0051 score: 218.72 eval: 1.1e-37 prob: 100 identity: 0.1905 startpos: 1
------SIEWYAVHTlgQEEKAKANLEKRIKAFGLQDKIFQVLIPTEEVV-----EL--------------------rgG---KKEVVRKKLFPGYLFIQMDLGdeAWEVVRGTPGITGFVGAG---MRPVPLSPDEVRHILEVSGLLG-------------------
>6c6uN_106 weight: 0.0050 score: 67.47 eval: 9.3e-05 prob: n/a identity: 0.1250 startpos: 1
------KKRWYVVQAfgFEGRVATSLREHIKLHNMEDLFGEVMVPTE------------------------------------------EKFFPGYVLVQMVMNDASWHLVRSVPRVMGFIGG--TSDRPAPISDKEVDAIMNRLQQ---------------------
>2k06A_109 weight: 0.0048 score: 63.66 eval: 0.00018 prob: n/a identity: 0.1488 startpos: 5
-----PKKRWYVVQAfgFEGRVATSLREHIKLHNMEDLFGEVMVPTEEVVE----------------------------IRGGQRRKSERKFFPGYVLVQMVMNDASWHLVRSVPRVMGFIGG--TSDRPAPISDKEVDAIMNRLQ----------------------
>6c6uN_306 weight: 0.0047 score: 19.38 eval: n/a prob: n/a identity: 0.1310 startpos: 1
------KKRWYVVQasGFEGRVATSLREHIKLHNMEDLFGEVMVPTEE------------------------------------------KFFPGYVLVQMVMNDASWHLVRSVPRVMGFIGGTSD--RPAPISDKEVDAIMNRLQQ---------------------
>2k06A_204 weight: 0.0044 score: 199.51 eval: 2.2e-34 prob: 99.93 identity: 0.1548 startpos: 1
-MSEAPKKRWYVVQasGFEGRVATSLREHIKLHNMEDLFGEVMVPTEEVV-----EI--------------------RGG---QRRKSERKFFPGYVLVQMVMNDASWHLVRSVPRVMGFIGGTSD--RPAPISDKEVDAIMNRLQQVGDKPR---------------
>5ondB_307 weight: 0.0043 score: 17.59 eval: n/a prob: n/a identity: 0.0714 startpos: 1
------MQSWYLLYcrGQLQRAQEHLERQ---------AVNCLAPMITLEKIVR----------------------------GKRTAVSEPLFPNYLFVEFDPEVIHTTTINATRGVSHFVRFGA---SPAIVPSAVIHQLSV---------------TEGAFEGFQA
>2ougA_308 weight: 0.0037 score: 17.05 eval: n/a prob: n/a identity: 0.0833 startpos: 1
-------QSWYLLYcrGQLQRAQEHLERQ---------AVNCLAPMITLEKIV-----RG-----------------------KRTAVSEPLFPNYLFVEFDPEVIHTTTINATRGVSHFVRFGAS---PAIVPSAVIHQLSVY---------KKVIITEGAFEGFQA
>5ondB_110 weight: 0.0037 score: 62.65 eval: 0.00021 prob: n/a identity: 0.0774 startpos: 1
------MQSWYLLYCkgQLQRAQEHLERQ---------AVNCLAPM-----ITLEKIV-----------------------RGKRTAVSEPLFPNYLFVEFDPEVIHTTTINATRGVSHFVRFG---ASPAIVPSAVIHQLSV---------------TEGAFEGFQA
>2ougD_310 weight: 0.0036 score: 16.59 eval: n/a prob: n/a identity: 0.0774 startpos: 1
-------QSWYLLYcrGQLQRAQEHLERQ---------AVNCLAPMITLEKI-------------------------VRG---KRTAVSEPLFPNYLFVEFDPEVIHTTTINATRGVSHFVRFGAS---PAIVPSAVIHQLSVY---------KKVIITEGAFEGFQA
>3p8bB_309 weight: 0.0033 score: 16.9 eval: n/a prob: n/a identity: 0.0714 startpos: 1
------AGKIFAVRvhGQEETTAKLIYSKVRTYNLP-----------------------------------------------IYAILAPSRVKGYIFVEAPNKGVVDEAIRGIRHARGVLPG--------EVPFKEIEHFLEEkaVSGLEPGDLVEVIAGPFKGQKA
>2ougA_107 weight: 0.0030 score: 66.43 eval: 0.00011 prob: n/a identity: 0.0774 startpos: 1
-------QSWYLLYCkgQLQRAQEHLERQA---------VNCLAP-----MITLEKIV-----------------------RGKRTAVSEPLFPNYLFVEFDPEVIHTTTINATRGVSHFVRFGA---SPAIVPSAVIHQLSVY---------KKVIITEGAFEGFQA
>2xhcA_108 weight: 0.0004 score: 65.43 eval: 0.00013 prob: n/a identity: 0.1131 startpos: 165
-----GEQDVYYIPLDV-------FDRDRIKKGKEveMLAEARKFFAKVSGRVEVVDYS-----------TRKEIRI-------YKTKRRKLFPGYVFVEMIMNDEAYNFVRSVPYVMGFVSSG---GQPVPVKDREMRPILRLA--lGFKVGDMVKIISGPFEDFAG
Powered by MSAViewer
Baker Lab | Rosetta@home | Contact | Terms of Service
©2024 University of Washington