rgpC - transport permease protein - LH12 Domain 1 Parse 1 Confidence: 0.78 Download Results Archive Download Domain Models

             1   .   10    .   20    .   30    .   40    .   50    .   60    .   70    .   80    .   90    .  100    .  110    .  120    .  130    .  140    .  150    .  160    .  170    .  180    .  190    .  200    .  210    .  220    .  230    .  240    .  250    .  260    .  270    .  280 
   sequence: MDFFSRKNRILLKELIKTDFKLRYQGSAIGYLWSILKPLMLFAIMYIVFVRFLPLGGDVPHWPVALLLGNVIWTFFQETTMMGMVSVVTRGDLLRKLNFSKQTIVFSAVSGAAINFGINVIVVLIFALLNGVTFTFRWNLFLLIPLFLELLLFSTGIAFILSTLYVRYRDIGPVWEVILQGGFYGTPIIYSLTYIATRSVVGAKLLLLSPIAQIIQDMRHILIDPANVTIWQMINHKSIAVIPYLVPIFVFIIGFLVFNYNAKKFAEIIGLLHLLHHLLHH
     chains: AAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAABBBBBBBBBBBB

>638294
MDFFSRKNRILLKELIKTDFKLRYQGSAIGYLWSILKPLMLFAIMYIVFVRFLPLGGDVPHWPVALLLGNVIWTFFQETTMMGMVSVVTRGDLLRKLNFSKQTIVFSAVSGAAINFGINVIVVLIFALLNGVTFTFRWNLFLLIPLFLELLLFSTGIAFILSTLYVRYRDIGPVWEVILQGGFYGTPIIYSLTYIATRSVVGAKLLLLSPIAQIIQDMRHILIDPANVTIWQMINHKSIAVIPYLVPIFVFIIGFLVFNYNAKKFAEIIGLLHLLHHLLHH
>6oihD_201 weight: 0.3223 score: 325.79 eval: 1.8e-44 prob: 100 identity: 0.1922 startpos: 1
-------NLSLILELVRQEIKNRYADTVLGIWWAFLWPILLVLIYTLIFSHLIGT---VYAYSIYLSSGIFPWFFFSNSLSRITGIFTEKKFLFTKIPIRLEVFPVVVIISELINYLIGISLVTLISftLGFEG--IKYFYLFPVALYLMIVYSFSIGMVLGTLNVFFRDIKEIIGVFLQIFFWFTPIVYTLDILPPF---VKKLIYYNPMYPVVSIHHLVFVNYLDLHLYSL-------LGFLLASPLVFFVSYYFFKKLEKDIKDF-------------
>6m96B_301 weight: 0.3042 score: 2.51 eval: n/a prob: n/a identity: 0.1851 startpos: 1
------MNLSLILELVRQEIKNRYADTVLGIWWAFLWPILLVLIYTLIFSHLIGAKLGhyAYSIYLSSGIFPWFFFSNSLSRITGIFTEKKFLFTKIPIRLEVFPVVVIISELINYLIGISLVTLISFITLGF-EGIKYFYLFPVALYLMIVYSFSIGMVLGTLNVFFRDIKEIIGVFLQIFFWFTPIVYTLDILPP---FVKKLIYYNPMYPVVSIHHLVFVNYLDLH-------LYSLLGFLLASPLVFFVSYYFFKKLEKDIKDFA------------
>7k2tB_101 weight: 0.3033 score: 274.5 eval: 1.8e-06 prob: n/a identity: 0.1922 startpos: 1
-------NLSLILELVRQEIKNRYADTVLGIWWAFLWPILLVLIYTLIFSHLI----tVYAYSIYLSSGIFPWFFFSNSLSRITGIFTEKKFLFTKIPIRLEVFPVVVIISELINYLIGISLVTLISFITLG-FEGIKYFYLFPVALYLMIVYSFSIGMVLGTLNVFFRDIKEIIGVFLQIFFWFTPIVYTLDILPP---FVKKLIYYNPMYPVVSIHHLVFVNYLDLH-------LYSLLGFLLASPLVFFVSYYFFKKLEKDIKDFA------------
>6oihD_102 weight: 0.0091 score: 267.2 eval: 2.6e-06 prob: n/a identity: 0.1886 startpos: 1
-------NLSLILELVRQEIKNRYADTVLGIWWAFLWPILLVLIYTLIFSHLIG---TVYAYSIYLSSGIFPWFFFSNSLSRITGIFTEKKFLFTKIPIRLEVFPVVVIISELINYLIGISLVTLISFITLGFEGIK-YFYLFPVALYLMIVYSFSIGMVLGTLNVFFRDIKEIIGVFLQIFFWFTPIVYTLDILPP---FVKKLIYYNPMYPVVSIHHLVFVNYLDLH-------LYSLLGFLLASPLVFFVSYYFFKKLEKDIKDF-------------
>7k2tB_302 weight: 0.0082 score: 2.41 eval: n/a prob: n/a identity: 0.1886 startpos: 1
-------NLSLILELVRQEIKNRYADTVLGIWWAFLWPILLVLIYTLIFSHLI---NTVYAYSIYLSSGIFPWFFFSNSLSRITGIFTEKKFLFTKIPIRLEVFPVVVIISELINYLIGISLVTLISFITLGF-EGIKYFYLFPVALYLMIVYSFSIGMVLGTLNVFFRDIKEIIGVFLQIFFWFTPIVYTLDILPP---FVKKLIYYNPMYPVVSIHHLVFVNYLDLH-------LYSLLGFLLASPLVFFVSYYFFKKLEKDIKDFA------------
>6m96B_103 weight: 0.0058 score: 266.6 eval: 2.7e-06 prob: n/a identity: 0.1922 startpos: 1
------MNLSLILELVRQEIKNRYADTVLGIWWAFLWPILLVLIYTLIFSHLIghENTVYAYSIYLSSGIFPWFFFSNSLSRITGIFTEKKFLFTKIPIRLEVFPVVVIISELINYLIGISLVTLISFITLG-FEGIKYFYLFPVALYLMIVYSFSIGMVLGTLNVFFRDIKEIIGVFLQIFFWFTPIVYTLDILPP---FVKKLIYYNPMYPVVSIHHLVFVNYLDLH-------LYSLLGFLLASPLVFFVSYYFFKKLEKDIKDFA------------
>6m96B_202 weight: 0.0058 score: 329.47 eval: 9.8e-45 prob: 100 identity: 0.1922 startpos: 1
------MNLSLILELVRQEIKNRYADTVLGIWWAFLWPILLVLIYTLIFSHLIGAKLgvYAYSIYLSSGIFPWFFFSNSLSRITGIFTEKKFLFTKIPIRLEVFPVVVIISELINYLIGISLVTLISftLGFEGI--KYFYLFPVALYLMIVYSFSIGMVLGTLNVFFRDIKEIIGVFLQIFFWFTPIVYTLDILPPF---VKKLIYYNPMYPVVSIHHLVFVNYLDLHLYSL-------LGFLLASPLVFFVSYYFFKKLEKDIKDFA------------
>6oihD_303 weight: 0.0047 score: 2.17 eval: n/a prob: n/a identity: 0.1886 startpos: 1
-------NLSLILELVRQEIKNRYADTVLGIWWAFLWPILLVLIYTLIFSHLIG---TVYAYSIYLSSGIFPWFFFSNSLSRITGIFTEKKFLFTKIPIRLEVFPVVVIISELINYLIGISLVTLISFITLGFEGIK-YFYLFPVALYLMIVYSFSIGMVLGTLNVFFRDIKEIIGVFLQIFFWFTPIVYTLDILPP---FVKKLIYYNPMYPVVSIHHLVFVNYLDLH-------LYSLLGFLLASPLVFFVSYYFFKKLEKDIKDF-------------
>6jbhC_104 weight: 0.0041 score: 241.4 eval: 1e-05 prob: n/a identity: 0.1886 startpos: 7
VLMEHIRNLYLIRRLSLFELKSDNSNQYLGILWEIINPMIQIAIYWFVFGYGIrhPVGHIPFILWMLAGMTVWFFVNQAVLQASKSVYTRIRMVAQMNFPISVIPTYVITAKFYQHLMLLAVIFIIFQFTPY--HVSVYLVQLPYYMFGLLALLVSFSLITSTLATVVRDVQMIVQSLVRILLYLTPLLWDPSHLPHLVQ---VIMRLNPLYYIVEGYRSALLGTSWYLV----DHASYTVYFWVVVILFFVFGSMVHLKFRAHFVDY-------------
>8tunC_105 weight: 0.0032 score: 241.2 eval: 1e-05 prob: n/a identity: 0.1352 startpos: 2
KRSPWQIQQAVLFALFLRELKTRLGG-RLGVFWVLLEPVAHIAVMTTLFSLAHRAAMPSIEYPVFLITGLIPFFMFRGLVTRLMEAIDSNRGLFAYRQVKPIDTVIARAMLEISLQSIVYLIALGTLGWLGFHFLPV-RALELAGVSAVLIMLGASLGLFFAVVTNEIPQARAIVRISLLPLYFVSGVIFPVHTIPPQY---LPLLQLNPVLHLIELSRASFFPQYRVLQ------GINLAYPAGFALLSLFLALMLYRLRRHQLAS--------------
>6jbhC_304 weight: 0.0030 score: 1.85 eval: n/a prob: n/a identity: 0.1815 startpos: 7
VLMEHIRNLYLIRRLSLFELKSDNSNQYLGILWEIINPMIQIAIYWFVFGYGIrhPVGHIPFILWMLAGMTVWFFVNQAVLQASKSVYTRIRMVAQMNFPISVIPTYVITAKFYQHLMLLAVIFIIFQFTPYHVSVYLVQL--PYYMFGLLALLVSFSLITSTLATVVRDVQMIVQSLVRILLYLTPLLWDPSHLPHL---VQVIMRLNPLYYIVEGYRSALLGTSWY----LVDHASYTVYFWVVVILFFVFGSMVHLKFRAHFVDY-------------
>8tt3D_106 weight: 0.0027 score: 238.3 eval: 1.2e-05 prob: n/a identity: 0.1352 startpos: 1
-RSPWQIQQAVLFALFLRELKTRLGG-RLGVFWVLLEPVAHIAVMTTLFSLAHRAAMPSIEYPVFLITGLIPFFMFRGLVTRLMEAIDSNRGLFAYRQVKPIDTVIARAMLEISLQSIVYLIALGTLGWLGFHFLPV-RALELAGVSAVLIMLGASLGLFFAVVTNEIPQARAIVRISLLPLYFVSGVIFPVHTIPPQY---LPLLQLNPVLHLIELSRASFFPQYRVLQGIN------LAYPAGFALLSLFLALMLYRLRRHQLAS--------------
>8tsiC_107 weight: 0.0024 score: 231 eval: 1.7e-05 prob: n/a identity: 0.1352 startpos: 9
---------AVLFALFLRELKTRLGGRWLGVFWVLLEPVAHIAVMTTLFSLAHRAAMPSIEYPVFLITGLIPFFMFRGLVTRLMEAIDSNRGLFAYRQVKPIDTVIARAMLEISLQSIVYLIALGTLGWLGFHFLPV-RALELAGVSAVLIMLGASLGLFFAVVTNEIPQARAIVRISLLPLYFVSGVIFPVHTIPPQY---LPLLQLNPVLHLIELSRASFFPQYRVLQGIN------LAYPAGFALLSLFLALMLYRLRRHQLAS--------------
>8tt3C_108 weight: 0.0023 score: 230.7 eval: 1.8e-05 prob: n/a identity: 0.1317 startpos: 1
--RSPWQIQQAVLALFLRELKTRLGG-RLGVFWVLLEPVAHIAVMTTLFSLAHRAAMPSIEYPVFLITGLIPFFMFRGLVTRLMEAIDSNRGLFAYRQVKPIDTVIARAMLEISLQSIVYLIALGTLGWLGFHFLPV-RALELAGVSAVLIMLGASLGLFFAVVTNEIPQARAIVRISLLPLYFVSGVIFPVHTIPPQY---LPLLQLNPVLHLIELSRASFFPQYRVLQG------INLAYPAGFALLSLFLALMLYRLRRHQLAS--------------
>8tshD_110 weight: 0.0022 score: 221.2 eval: 2.9e-05 prob: n/a identity: 0.1352 startpos: 1
-RSPWQIQQAVLFALFLRE-KTRLGG-RLGVFWVLLEPVAHIAVMTTLFSLAHRAAMPSIEYPVFLITGLIPFFMFRGLVTRLMEAIDSNRGLFAYRQVKPIDTVIARAMLEISLQSIVYLIALGTLGWLGFHFLPV-RALELAGVSAVLIMLGASLGLFFAVVTNEIPQARAIVRISLLPLYFVSGVIFPVHTIPPQY---LPLLQLNPVLHLIELSRASFFPQYRVLQ------GINLAYPAGFALLSLFLALMLYRLRRHQLA---------------
>8tsiC_203 weight: 0.0022 score: 333.15 eval: 4.2e-45 prob: 100 identity: 0.1423 startpos: 1
-KRSPWQIQAVLFALFLRELKTRLGGRWLGVFWVLLEPVAHIAVMTTLFSLAHRAAMPSIEYPVFLITGLIPFFMFRGLVTRLMEAIDSNRGLFAYRQvpIDTVIA----RAMLEISLQSIVYLIalGWLGFHFLP-VRALELAGVSAVLIMLGASLGLFFAVVTNEIPQARAIVRISLLPLYFVSGVIFPVHTIPPQ---YLPLLQLNPVLHLIELSRASFFPQYrlQGINL-------AYPAGFALLSLFLALMLYRLRRHQLAS--------------
>8tslC_109 weight: 0.0022 score: 230.4 eval: 1.8e-05 prob: n/a identity: 0.1352 startpos: 1
-RSPWQIQQAVLFALFLRE-KTRLGGRWLGVFWVLLEPVAHIAVMTTLFSLAHRAAMPSIEYPVFLITGLIPFFMFRGLVTRLMEAIDSNRGLFAYRQVKPIDTVIARAMLEISLQSIVYLIALGTLGWLGFHFLPV-RALELAGVSAVLIMLGASLGLFFAVVTNEIPQARAIVRISLLPLYFVSGVIFPVHTIPPQY---LPLLQLNPVLHLIELSRASFFPQYRVLQ------GINLAYPAGFALLSLFLALMLYRLRRHQLAS--------------
>8tslC_305 weight: 0.0021 score: 1.77 eval: n/a prob: n/a identity: 0.1388 startpos: 1
-RSPWQIQQAVLFALFLRE-KTRLGGRWLGVFWVLLEPVAHIAVMTTLFSLAHRAAMPSIEYPVFLITGLIPFFMFRGLVTRLMEAIDSNRGLFAYRQVKPIDTVIARAMLEISLQSIVYLIALGTLGWLGFHFLPV-RALELAGVSAVLIMLGASLGLFFAVVTNEIPQARAIVRISLLPLYFVSGVIFPVHTIPP---QYLPLLQLNPVLHLIELSRASFFpyRVLQG---INLA----YPAGFALLSLFLALMLYRLRRHQLAS--------------
>6an7C_306 weight: 0.0017 score: 1.76 eval: n/a prob: n/a identity: 0.1851 startpos: 1
--------LSLILELVRQEIKNRYADTVLGIWWAFLWPILLVLIYTLIFSHLIGAKT-VYAYSIYLSSGIFPWFFFSNSLSRITGIFTEKKFLFTKIPIRLEVFPVVVIISELINYLIGISLVTLISFITLGFEG-IKYFYLFPVALYLMIVYSFSIGMVLGTLNVFFRDIKEIIGVFLQIFFWFTPIVYTLDILP---PFVKKLIYYNPMYPVVSIHHLVFVNYLDLH-------LYSLLGFLLASPLVFFVSYYFFKKLEKDIKDF-------------
>8tt3D_307 weight: 0.0015 score: 1.61 eval: n/a prob: n/a identity: 0.1388 startpos: 1
-RSPWQIQQAVLFALFLRELKTRLGGR-LGVFWVLLEPVAHIAVMTTLFSLAHRAAMPSIEYPVFLITGLIPFFMFRGLVTRLMEAIDSNRGLFAYRQVKPIDTVIARAMLEISLQSIVYLIALGTLGWLGFHFLPV-RALELAGVSAVLIMLGASLGLFFAVVTNEIPQARAIVRISLLPLYFVSGVIFPVHTIPP---QYLPLLQLNPVLHLIELSRASFFpyRVLQG---INLA----YPAGFALLSLFLALMLYRLRRHQLAS--------------
>8tshD_310 weight: 0.0014 score: 1.45 eval: n/a prob: n/a identity: 0.1388 startpos: 1
-RSPWQIQQAVLFALFLRE-KTRLGGR-LGVFWVLLEPVAHIAVMTTLFSLAHRAAMPSIEYPVFLITGLIPFFMFRGLVTRLMEAIDSNRGLFAYRQVKPIDTVIARAMLEISLQSIVYLIALGTLGWLGFHFLPV-RALELAGVSAVLIMLGASLGLFFAVVTNEIPQARAIVRISLLPLYFVSGVIFPVHTIPPQYL---PLLQLNPVLHLIELSRASFFpyRVLQG---INLA----YPAGFALLSLFLALMLYRLRRHQLA---------------
>8tsiC_309 weight: 0.0014 score: 1.45 eval: n/a prob: n/a identity: 0.1459 startpos: 1
-KRSPWQIQAVLFALFLRELKTRLGGRWLGVFWVLLEPVAHIAVMTTLFSLAHRAAMPSIEYPVFLITGLIPFFMFRGLVTRLMEAIDSNRGLFAYRQVKPIDTVIARAMLEISLQSIVYLIALGTLGWLGFHFLPV-RALELAGVSAVLIMLGASLGLFFAVVTNEIPQARAIVRISLLPLYFVSGVIFPVHTIPP---QYLPLLQLNPVLHLIELSRASFFPQYRVL--QGINLA----YPAGFALLSLFLALMLYRLRRHQLAS--------------
>8tt3C_308 weight: 0.0014 score: 1.57 eval: n/a prob: n/a identity: 0.1317 startpos: 1
-RSPWQIQQAVL-ALFLRELKTRLGGR-LGVFWVLLEPVAHIAVMTTLFSLAHRAAMPSIEYPVFLITGLIPFFMFRGLVTRLMEAIDSNRGLFAYRQVKPIDTVIARAMLEISLQSIVYLIALGTLGWLGFHFLPV-RALELAGVSAVLIMLGASLGLFFAVVTNEIPQARAIVRISLLPLYFVSGVIFPVHTIPP---QYLPLLQLNPVLHLIELSRASFFpyRVLQGINL-------AYPAGFALLSLFLALMLYRLRRHQLAS--------------
>7k2tB_204 weight: 0.0009 score: 324.04 eval: 4.2e-44 prob: 100 identity: 0.1922 startpos: 1
-------NLSLILELVRQEIKNRYADTVLGIWWAFLWPILLVLIYTLIFSHLINT---VYAYSIYLSSGIFPWFFFSNSLSRITGIFTEKKFLFTKIPIRLEVFPVVVIISELINYLIGISLVTLISftLGFEGI--KYFYLFPVALYLMIVYSFSIGMVLGTLNVFFRDIKEIIGVFLQIFFWFTPIVYTLDILPPF---VKKLIYYNPMYPVVSIHHLVFVNYLDLHLYSL-------LGFLLASPLVFFVSYYFFKKLEKDIKDFA------------
>6jbhC_205 weight: 0.0005 score: 334.72 eval: 4.2e-45 prob: 100 identity: 0.1815 startpos: 7
VLMEHIRNLYLIRRLSLFELKSDNSNQYLGILWEIINPMIQIAIYWFVFGYGIRGRhgHIPFILWMLAGMTVWFFVNQAVLQASKSVYTRIRMVAQMNFPISVIPTYVITAKFYQHLMLLAVIFIIFQFTPYHVS--VYLVQLPYYMFGLLALLVSFSLITSTLATVVRDVQMIVQSLVRILLYLTPLLWDPSHLPHL---VQVIMRLNPLYYIVEGYRSALLGTSWYlaSY-------TVYFWVVVILFFVFGSMVHLKFRAHFVDY-------------
>8tshC_206 weight: 0.0003 score: 322.64 eval: 1.7e-43 prob: 100 identity: 0.1388 startpos: 1
VKRSPWQIQ-AVLALFLRE-KTRL-GGRLGVFWVLLEPVAHIAVMTTLFSLAHRAAMPSIEYPVFLITGLIPFFMFRGLVTRLMEAIDSNRGLFAYRqkPIDTVIA----RAMLEISLQSIVYLIAlgWLGFHFLP-VRALELAGVSAVLIMLGASLGLFFAVVTNEIPQARAIVRISLLPLYFVSGVIFPVHTIPPQ---YLPLLQLNPVLHLIELSRASFFPQYrlQGINL-------AYPAGFALLSLFLALMLYRLRRHQLASV-------------
>8tshD_209 weight: 0.0003 score: 307.62 eval: 2.8e-41 prob: 100 identity: 0.1423 startpos: 1
-RSPWQIQQAVLFALFLRE-KTR-LGGRLGVFWVLLEPVAHIAVMTTLFSLAHRAAMPSIEYPVFLITGLIPFFMFRGLVTRLMEAIDSNRGLFAYRqkPIDTVIA----RAMLEISLQSIVYLIAlgWLGFHFLP-VRALELAGVSAVLIMLGASLGLFFAVVTNEIPQARAIVRISLLPLYFVSGVIFPVHTIPPQ---YLPLLQLNPVLHLIELSRASFFPQYrlQGINL-------AYPAGFALLSLFLALMLYRLRRHQLA---------------
>8tslC_207 weight: 0.0003 score: 312.06 eval: 5.9e-42 prob: 100 identity: 0.1423 startpos: 1
-RSPWQIQQAVLFALFLRE-KTRLGGRWLGVFWVLLEPVAHIAVMTTLFSLAHRAAMPSIEYPVFLITGLIPFFMFRGLVTRLMEAIDSNRGLFAYRQvpIDTVI-A---RAMLEISLQSIVYLIAlgWLGFHFLP-VRALELAGVSAVLIMLGASLGLFFAVVTNEIPQARAIVRISLLPLYFVSGVIFPVHTIPPQ---YLPLLQLNPVLHLIELSRASFFPQYrlQGINL-------AYPAGFALLSLFLALMLYRLRRHQLAS--------------
>8tt3C_208 weight: 0.0003 score: 312.16 eval: 5.4e-42 prob: 100 identity: 0.1388 startpos: 1
--RSPWQIQQAVLALFLRELKTRLGG-RLGVFWVLLEPVAHIAVMTTLFSLAHRAAMPSIEYPVFLITGLIPFFMFRGLVTRLMEAIDSNRGLFAYRqkPIDTVIAR----AMLEISLQSIVYLIalGWLGFHFLP-VRALELAGVSAVLIMLGASLGLFFAVVTNEIPQARAIVRISLLPLYFVSGVIFPVHTIPPQ---YLPLLQLNPVLHLIELSRASFFPQYrlQGINL-------AYPAGFALLSLFLALMLYRLRRHQLAS--------------
>8tt3D_210 weight: 0.0003 score: 304.13 eval: 9.8e-41 prob: 100 identity: 0.1423 startpos: 1
-RSPWQIQQAVLFALFLRELKTRLGG-RLGVFWVLLEPVAHIAVMTTLFSLAHRAAMPSIEYPVFLITGLIPFFMFRGLVTRLMEAIDSNRGLFAYRQvpIDTVI-A---RAMLEISLQSIVYLIalGWLGFHFLP-VRALELAGVSAVLIMLGASLGLFFAVVTNEIPQARAIVRISLLPLYFVSGVIFPVHTIPPQ---YLPLLQLNPVLHLIELSRASFFPQYrlQGINL-------AYPAGFALLSLFLALMLYRLRRHQLAS--------------

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