T1017s2 Domain 1 Parse 1 Confidence: 0.17

Job ID	Status	Method	Username	Target	Length	Date (PST)	Expiration Date (PST)
478	Complete	Structure prediction	casp	T1017s2	129	11 Jul 2018	-

Domain ID	Domain	Parse	Confidence	Modeling Method	Model Span	Length	Date (PST)
683	1	1	0.17	comparative modeling	1-129	129	11 Jul 2018

             1   .   10    .   20    .   30    .   40    .   50    .   60    .   70    .   80    .   90    .  100    .  110    .  120    .    
   sequence: HQEVQQQRFDELSKIYDKSHPVGELTVDGQTIRQSSVSNRYGMTKVFESQNLTDKQIHNYAQQLAGDTPLKEVRPGIYTAKLENGTSITLRSLSSSQEQTGARWTIDIKGNKQLSDIAYKYKDVEIKFK
    psipred: -HHHHHHHHHHHHHHH-------EEEE--EEEEE---------EEEEE-----HHHHHHHHHHH------------EEEEE-----EEEE-------------EEEEE-----HHHH------EEEEE-
    spider3: -HHHHHHHHHHHHHHH--------EEE--EEEEE---------EEEE------HHHHHHHHHHHH-----------EEEEE-----EEEEEEE---------EEEEEE---HHHHHHH-----EEEEE-
 deepconcnf: -HHHHHHHHHHHH----------EEEE--EEEEE--------EEEEE------HHHHHHHHHHHH-----------EEEEEE----EEEEEE----------EEEEEEE-------------EEEEEE-

View

GREMLIN (Neff(80%)/√Len: 19.2)

Alignment

>683
HQEVQQQRFDELSKIYDKSHPVGELTVDGQTIRQSSVSNRYGMTKVFESQNLTDKQIHNYAQQLAGDTPLKEVRPGIYTAKLENGTSITLRSLSSSQEQTGARWTIDIKGNKQLSDIAYKYKDVEIKFK
>1g6oA_101 weight: 0.8948 score: 52.11 eval: 0.0013 prob: n/a identity: 0.0853 startpos: 20
LNPLRHATEELFGDFLKM--nITEICYNgvVWVLKN---eWQPFDVRDRKAFSLSRLMHFARCCAskKTIDNYENPILSSNLANGERVQIVLSPVTVNDETISISIRIPS-------------------
>2oap1_102 weight: 0.0360 score: 44.91 eval: 0.0045 prob: n/a identity: 0.1163 startpos: 122
-----------IDPLMEDT-NVEDISCDgiPIFIYH--QKYGNVETNI--VLDQEKLDRMVLRLTqgKHISIA-NPIVDATLPDGSRLQATFG-TEVTPRGSSFTIRKFT-------------------
>4ihqA_103 weight: 0.0348 score: 44.15 eval: 0.0051 prob: n/a identity: 0.0930 startpos: 118
HFIRDKLYTGSLEPLIRD--yIEDISIPggHVYIVH--KVFGPMRTSIKF-ENYEELDNLIVSLSeyRPVSHN-RPVVDASLPDGSRVNFVYGVD-ISRRGSNLTVRKF--------------------
>4ii7A_106 weight: 0.0344 score: 43.4 eval: 0.0058 prob: n/a identity: 0.0930 startpos: 112
HFIRDKLYTGSLEPLIRDP-YIEDISIPggHVYIVH--KVFGPMRTSIKF-ENYEELDNLIVSLSeyRPVSHN-RPVVDASLPDGSRVNFVYGVD-ISRRGSNLTVRK---------------------

Alignment cluster 1 [ RosettaCM constraints ]

>683
HQEVQQQRFDELSKIYDKSHPVGELTVDGQTIRQSSVSNRYGMTKVFESQNLTDKQIHNYAQQLAGDTPLKEVRPGIYTAKLENGTSITLRSLSSSQEQTGARWTIDIKGNKQLSDIAYKYKDVEIKFK
>5ts4B_301 weight: 0.7852 score: 6.08 eval: n/a prob: n/a identity: 0.1008 startpos: 3
EAKIAIELFKEAMkrFKecSPDTRIESNGQEYRG-------------------SEECKKFAEEMKKTHPWEV----RVERYRSDGDRFEIELRVNFNGK-TFRMEIRMRKVN------GEFRIEEMRLH
>5ierD_302 weight: 0.0444 score: 5.09 eval: n/a prob: n/a identity: 0.0853 startpos: 1
-QSPALIASQSLWRCTQAHDREgaLMADDVVIETPIGKSVT-----NPDGSggKEAVGAFFDTHIAATR---LTVTCEETFPSSsdEIAHILVAHSEFTSEVRGVFTYRVN-------KAGLITNLRGY
>5ts4A_303 weight: 0.0430 score: 5.01 eval: n/a prob: n/a identity: 0.0775 startpos: 1
MSEEAKIAIELFKEAMKDpsPDTRIESNGQEYRG-------------------SEECKKFAEEMKKTEV-------RVERYRSDGDRFEIELRVNKT----FRMEIRMRKVN------GEFRIEEMRLH
>5if6F_305 weight: 0.0404 score: 4.85 eval: n/a prob: n/a identity: 0.0853 startpos: 1
TQSPALIASQSLGRCTQAKDREgaLMADDVVIETPIGKSVT-----NPDGSggKEAVGAFWDTHIADDRVT--VTCEETFPSSSPDEIAHILVAHAEGFtrGVFTYRVNK---------AGLITNLRGY
>3fh1A_306 weight: 0.0316 score: 4.67 eval: n/a prob: n/a identity: 0.0775 startpos: 8
RSEQTAEIMRRFNDVFQLHDPAaeLIAEECVIENTVPAPDGAR---HAG----RQACVQLWSAIATQPGT-RFDLEETFVAGDR-ATIRWRYWMADGNSVRGVNLMRVQD----------GRIVEAMGY
>5if6A_310 weight: 0.0303 score: 4.46 eval: n/a prob: n/a identity: 0.0698 startpos: 1
TQSPALIASQSLGRCTQAKDREgaLMADDVVIETPIGKSVT-----NPDGSggKEAVGAFWDTHIADDRVTVTCEETFPSSSPDEIAHILVAHAEFDGGFtgVFTYRVNK---------AGLITNLRGY
>5ieoA_308 weight: 0.0250 score: 4.64 eval: n/a prob: n/a identity: 0.0930 startpos: 4
AHEAIEAALADFVKVYNSKDAAgsKYMDDAVIFPLDMARVDG-----------RQNIQKLWQGLMDMGV-SEPKFTTLNVQESGdaFESGSFSLKGPVDIAGIYVEVWRKGGWKLYRTIANLDP-----

Alignment cluster 2 [ RosettaCM constraints ]

>683
HQEVQQQRFDELSKIYDKSHPVGELTVDGQTIRQSSVSNRYGMTKVFESQNLTDKQIHNYAQQLAGDTPLKEVRPGIYTAKLENGTSITLRSLSSSQEQTGARWTIDIKGNKQLSDIAYKYKDVEIKFK
>3ifvA_104 weight: 1.0000 score: 44 eval: 0.0052 prob: n/a identity: 0.0543 startpos: 59
------VNLSRLEEVAG-iHLTLNIRIDGLSYTL-dIPDLDLAANIVL----EGTHLDRGIKAADMV-------SDHIRLRVdaEETFHIEAEGD-----TDDVDLSLPPA-DLISIEAGAADSLFSLD

Alignment cluster 3 [ RosettaCM constraints ]

>683
HQEVQQQRFDELSKIYDKSHPVGELTVDGQTIRQSSVSNRYGMTKVFESQNLTDKQIHNYAQQLAGDTPLKEVRPGIYTAKLENGTSITLRSLSSSQEQTGARWTIDIKGNKQLSDIAYKYKDVEIKFK
>3k4xA_105 weight: 1.0000 score: 43.72 eval: 0.0055 prob: n/a identity: 0.0698 startpos: 461
------KYLLDIIKGSSLS-DRVGIRLspALFQFDL---KSGFLQFFLAPK-eASLFKRIIDGFK------DCVQLVNFQCKEDGIIAQAVDDS-----RVLLVSLEIGVE-AFQEYRC-DHPVTLGMD

Alignment cluster 4 [ RosettaCM constraints ]

>683
HQEVQQQRFDELSKIYDKSHPVGELTVDGQTIRQSSVSNRYGMTKVFESQNLTDKQIHNYAQQLAGDTPLKEVRPGIYTAKLENGTSITLRSLSSSQEQTGARWTIDIKGNKQLSDIAYKYKDVEIKFK
>4wbyA_110 weight: 1.0000 score: 42.34 eval: 0.0069 prob: n/a identity: 0.0620 startpos: 5
VPENIEEIAREVGQIAKEM--GLRAYIVGGVVRDILLGKEVWDVDFVVEG--NAIELAKELARRHGVNVHPFPEFGTAHLKIG-KLKLEFATAR-----------------------------------

Alignment cluster 5 [ RosettaCM constraints ]

T1017s2 Domain 1 Parse 1 Confidence: 0.17 Download Results Archive Download Domain Models

T1017s2 Domain 1 Parse 1 Confidence: 0.17