T1004_transition Domain 1 Parse 1 Confidence: 0.46
| Job ID | Status | Method | Username | Target | Length | Date (PST) | Expiration Date (PST) |
|---|
| 514 | Complete | Domain prediction | casp | T1004_transition | 191 | 17 Jul 2018 | - |
| Domain ID | Domain | Parse | Confidence | Modeling Method | Model Span | Length | Date (PST) |
|---|
| 738 | 1 | 1 | 0.46 | comparative modeling | 1-191 | 191 | 17 Jul 2018 |
1 . 10 . 20 . 30 . 40 . 50 . 60 . 70 . 80 . 90 . 100 . 110 . 120 . 130 . 140 . 150 . 160 . 170 . 180 . 190
sequence: GLPSNKNAVISGTNILDIASPGVYFVMGMTGGMPSGVSSGFLDLSVDANDNRLARLTDAETGKEYTSIKKPTGTYTAWKKEFEPKDMEKYLLSSIRDDGSASFPLLVYTSDSKTFQQAIIDHIDRTGQTTFTFYVQGGVSGSPMSNSCRGLFMSDTPNTSSLHGVYNAIGTDGRNVTGSVVGSNWTSPKTS
deepconcnf: --------EE-----------EEEEEE----------EEEEEEEEEE----EEEEEEE-----EEEEEE------HHHHHH---------EEEEE-----EEEEEEEEE---HHHHHHHHHHHHHH---EEEEEEE-----------EEEEEEE---------EEEEEE-----EEEEEEE----------
psipred: -------EEEE---HHH-----EEEEE-------------EEEEEE-----EEEEEE------EEEEE---------HHH---HHHHHHH--------------EEEEEE----HHHHHHHHHHH----EEEEEEE-----------EEEEEEE--------EEEEEEE-----EEEEEEE----------
spider3: --------EEE-----------EEEEE------------EEEEEEE-----EEEEEEE-----EEEEE---------------HHHEEEEE----------EE-EEEEE-----HHHHHHHHHHHH---EEEEEEE-------------EEEEE---------EEEEEEE-----EEEEEE----------
>738
GLPSNKNAVISGTNILDIASPGVYFVMGMTGGMPSGVSSGFLDLSVDANDNRLARLTDAETGKEYTSIKKPTGTYTAWKKEFEPKDMEKYLLSSIRDDGSASFPLLVYTSDSKTFQQAIIDHIDRTGQTTFTFYVQGGVSGSPMSNSCRGLFMSDTPNTSSLHGVYNAIGTDGRNVTGSVVGSNWTSPKTS
>5m9fA_301 weight: 0.3510 score: 5.78 eval: n/a prob: n/a identity: 0.4712 startpos: 1
-----------------------------------------------------------------------------------------------------SFPLLVYTSDSKTFQQAIIDHIDRTGQTTFTFYVQGGVSGSPMSNSCRGLFMSDTPNTSSLHGVYNAIGTDGRNVTGSVVGSNWTSPKTS
>5m9fA_101 weight: 0.3280 score: 83.53 eval: 2.6e-05 prob: n/a identity: 0.4607 startpos: 1
-----------------------------------------------------------------------------------------------------SFPLLVYTSDSKTFQQAIIDHIDRTGQTTFTFYVQGGVSGSPMSNSCRGLFMSDTPNTSSLHGVYNAIGTDGRNVTGSVVGSNWTSPK--
>5m9fA_201 weight: 0.3210 score: 259.17 eval: 2.3e-36 prob: 100 identity: 0.4712 startpos: 1
-----------------------------------------------------------------------------------------------------SFPLLVYTSDSKTFQQAIIDHIDRTGQTTFTFYVQGGVSGSPMSNSCRGLFMSDTPNTSSLHGVYNAIGTDGRNVTGSVVGSNWTSPKTS
>738
GLPSNKNAVISGTNILDIASPGVYFVMGMTGGMPSGVSSGFLDLSVDANDNRLARLTDAETGKEYTSIKKPTGTYTAWKKEFEPKDMEKYLLSSIRDDGSASFPLLVYTSDSKTFQQAIIDHIDRTGQTTFTFYVQGGVSGSPMSNSCRGLFMSDTPNTSSLHGVYNAIGTDGRNVTGSVVGSNWTSPKTS
>4q1uA_302 weight: 0.4997 score: 3.62 eval: n/a prob: n/a identity: 0.0733 startpos: 66
KEPAVSELEIIGNTLDISSFNPHGISTFIDD----DNTVYLLVVNHPGSSSTVEVFKFQEEEKSLLHLKTIRHKLLPS--------VNDIVAVGPE-------HFYATNDHYFIDPYLQSWEMHLGLAWSFVTYYSPNDVRVVAEGFDFANGINISPDGKY---VYIAELLAHKIHVYEKHANWTLTPLKV
>4hhqA_102 weight: 0.4755 score: 54.36 eval: 0.0021 prob: n/a identity: 0.0628 startpos: 82
---------------------PQGISTFIDD----DNTVYLLVVNQPGSSSTVEVFKFQEEEKSLLHLKTI-----------RHKLLPSVNDIVAV----GPEHFYATNDHYFIDPYLKSWEMHLGLAWSFVTYYSPNDVRVVAEGFDFANGINISP---DGKYVYIAELLAHKIHVYEKHawTLTPLR--
>4q1uA_104 weight: 0.0127 score: 52.85 eval: 0.0026 prob: n/a identity: 0.0628 startpos: 87
---------------------PHGISTFIDD-----DNTVYLLVVNHpsSSTVEVFKFQEEEKSLLHLKTI-----------RHKLLPSVNDIVAV----GPEHFYATNDHYFIDPYLQSWEMHLGLAWSFVTYYSPNDVRVVAEGFDFANGINISP---DGKYVYIAELLAHKIHVYEKHANWTLTPL--
>3sreA_304 weight: 0.0122 score: 3.57 eval: n/a prob: n/a identity: 0.0733 startpos: 66
KEPAVSELEIIGNTLDISSFNPHGISTFID----DDNTVYLLVVNHPGSSSTVEVFKFQEEEKSLLHLKTIRHKLLPS--------VNDIVAVGPE-------HFYATNDHYFIDPYLKSWEMHLGLAWSFVTYYSPNDVRVVAEGFDFANGINISPDGKY---VYIAELLAHKIHVYEKHANWTLTPLRV
>738
GLPSNKNAVISGTNILDIASPGVYFVMGMTGGMPSGVSSGFLDLSVDANDNRLARLTDAETGKEYTSIKKPTGTYTAWKKEFEPKDMEKYLLSSIRDDGSASFPLLVYTSDSKTFQQAIIDHIDRTGQTTFTFYVQGGVSGSPMSNSCRGLFMSDTPNTSSLHGVYNAIGTDGRNVTGSVVGSNWTSPKTS
>3s8jA_303 weight: 0.9797 score: 3.6 eval: n/a prob: n/a identity: 0.1099 startpos: 1
-----APKPIVDIDGKPVLYGVDYFVVSAI----WGAGGGGLTVYGPGNKKklSVVQDPFDNgiFSAIKNVKDNIV-----RESVDL--NVKFNITINCNETTAWKVDRFPG----------------VIGWTVTLGGEKGYHGFESTHSMFKIKKAGLPFSYKFHffFDKYRIR-RLILTNDAKEFVFIK
>1wbaA_306 weight: 0.0203 score: 3.47 eval: n/a prob: n/a identity: 0.0785 startpos: 1
------DDPVYDAEGNKLVNRGKYTIVSFSDG-------AGIDVVATGNEnpLSIVKSTRNIMysISSEDKTPPQPR-----NILENMRLKINFATDPHKGD-VWSVVDFQPDG----------------QQLKLAGRYPNQVKG----AFTIQKGSNTPRTYKLLFCPVGSPCKNIGISTDPEGKKRLVV
>738
GLPSNKNAVISGTNILDIASPGVYFVMGMTGGMPSGVSSGFLDLSVDANDNRLARLTDAETGKEYTSIKKPTGTYTAWKKEFEPKDMEKYLLSSIRDDGSASFPLLVYTSDSKTFQQAIIDHIDRTGQTTFTFYVQGGVSGSPMSNSCRGLFMSDTPNTSSLHGVYNAIGTDGRNVTGSVVGSNWTSPKTS
>5m2nA_103 weight: 0.9710 score: 54.33 eval: 0.0021 prob: n/a identity: 0.0785 startpos: 60
----------------------VTCVRFVP-------DSDFMVSASED--HHVKIWKFTdhLQCIQTIQHYSKTIVALSAL-------sLISVGCA-----DGTISIWRQNI--------------QNDEFGLAHEFTIK--KGFFYPLCLSLSKVE---EKKYLLAIGGTNVNVFIASFILSDSGIEK--
>3i2nA_105 weight: 0.0290 score: 52.36 eval: 0.0028 prob: n/a identity: 0.0576 startpos: 161
---------------------CWTVAFGNAY-----NQEERVVCAGYD--NGDIKLFDLRNMALRWETNIKnvCSLEFDRK---iSMNKLVATSL----EGKFHVFDMRTQH--------------PTKGFASVSEKAH------sTVWQVRHLPQ-----NRELFLTAGGAGGLHLWKYEYP--------
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